Factsheet for TraesCS2A01G099400.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G098700.1	Wheat	nucleus	96.35	97.06
HORVU2Hr1G017020.2	Barley	nucleus	39.42	96.43
TraesCS2B01G115700.1	Wheat	nucleus	95.99	95.99
VIT_04s0069g01150.t01	Wine grape	nucleus	14.96	71.93
Os07t0686100-01	Rice	nucleus	66.42	66.42
TraesCS4A01G128900.1	Wheat	nucleus	51.46	62.67
Zm00001d022550_P001	Maize	nucleus	60.58	58.25
GSMUA_Achr8P21560_001	Banana	nucleus	44.16	50.84
OQU90534	Sorghum	nucleus	58.03	50.0
GSMUA_Achr10P...	Banana	mitochondrion, nucleus	34.31	46.53
GSMUA_Achr6P15970_001	Banana	nucleus	31.02	43.81
VIT_12s0034g00110.t01	Wine grape	nucleus	15.33	42.42
GSMUA_Achr10P...	Banana	nucleus	36.13	42.31
VIT_13s0175g00120.t01	Wine grape	nucleus	50.0	42.15
TraesCS1A01G306300.1	Wheat	nucleus	49.27	41.67
TraesCS3A01G337200.1	Wheat	nucleus	50.37	40.83
KRH44714	Soybean	nucleus	47.81	40.56
KRH13203	Soybean	nucleus	43.43	39.4
KRH62689	Soybean	nucleus	44.89	38.92
KRH56272	Soybean	nucleus	44.89	38.92
TraesCS5A01G141500.1	Wheat	nucleus	43.8	38.34
TraesCS3A01G378700.1	Wheat	nucleus	28.1	29.96
TraesCS1A01G273000.1	Wheat	nucleus	25.55	27.67
Solyc01g009510.1.1	Tomato	nucleus	18.61	26.84
TraesCS7A01G170600.1	Wheat	nucleus	33.58	26.82
TraesCS6A01G333600.2	Wheat	nucleus	32.85	25.71
TraesCS5A01G237200.2	Wheat	nucleus	32.85	24.46
TraesCS3A01G371800.1	Wheat	nucleus	31.75	22.25
TraesCS3A01G372200.1	Wheat	nucleus	29.56	21.2
TraesCS3A01G371900.3	Wheat	nucleus	29.2	20.94
TraesCS3A01G372000.1	Wheat	nucleus	28.83	20.63
TraesCS3A01G372100.2	Wheat	nucleus	29.2	20.46

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	ncoils:Coil	GO:GO:0003674	GO:GO:0003700	GO:GO:0006139
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR004827
PFAM:PF00170	ScanProsite:PS00036	PFscan:PS50217	PANTHER:PTHR22952	PANTHER:PTHR22952:SF211	SMART:SM00338
SUPFAM:SSF57959	EnsemblPlantsGene:TraesCS2A01G099400	EnsemblPlants:TraesCS2A01G099400.1	InterPro:bZIP	TIGR:cd14707	SEG:seg

Description

No Description!

Coordinates

chr2A:-:52392120..52393481

Molecular Weight (calculated)

29838.6 Da

IEP (calculated)

9.955

GRAVY (calculated)

-0.695

Length

274 amino acids

Sequence
(BLAST)

001: MGVQTMSSLG GGGGGGGGGG ALSRQGSVYG LTLNEVESHL GEPLRSMNLE DLLRTVLPAD DAEPRGTGTG KKTVDEVWRD IESAGRGRQP TVGEMTLEDF
101: LSRAGVPVGG GGCAGAHWLH QYHPPQQYVT RPLPRPLGVG AGPVLDAVYQ GGFLSQAGGR KRGAAVVGGD GVVEKTVERR QKRMIKNRES AARSRARKQA
201: YTNELENKIS RLEEEIEHLK ELKKLEPVMQ FLPQQEAGER QQQLRRHAVL YMPQPEAEPK QHRHQLRRIN SASF

Best Arabidopsis Sequence Match ( AT2G41070.1 )
(BLAST)

001: MGSIRGNIEE PISQSLTRQN SLYSLKLHEV QTHLGSSGKP LGSMNLDELL KTVLPPAEEG LVRQGSLTLP RDLSKKTVDE VWRDIQQDKN GNGTSTTTTH
101: KQPTLGEITL EDLLLRAGVV TETVVPQENV VNIASNGQWV EYHHQPQQQQ GFMTYPVCEM QDMVMMGGLS DTPQAPGRKR VAGEIVEKTV ERRQKRMIKN
201: RESAARSRAR KQAYTHELEI KVSRLEEENE KLRRLKEVEK ILPSEPPPDP KWKLRRTNSA SL

Arabidopsis Description

EELBasic-leucine zipper (bZIP) transcription factor family protein [Source:TAIR;Acc:AT2G41070]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.