Factsheet for TraesCS2B01G115700.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G017020.2	Barley	nucleus	39.42	96.43
TraesCS2A01G099400.1	Wheat	nucleus	95.99	95.99
TraesCS2D01G098700.1	Wheat	nucleus	94.16	94.85
VIT_04s0069g01150.t01	Wine grape	nucleus	14.96	71.93
Os07t0686100-01	Rice	nucleus	65.69	65.69
TraesCS4B01G175800.1	Wheat	nucleus	50.37	61.33
Zm00001d022550_P001	Maize	nucleus	59.12	56.84
GSMUA_Achr8P21560_001	Banana	nucleus	43.8	50.42
OQU90534	Sorghum	nucleus	56.93	49.06
GSMUA_Achr10P...	Banana	mitochondrion, nucleus	34.67	47.03
GSMUA_Achr6P15970_001	Banana	nucleus	31.02	43.81
GSMUA_Achr10P...	Banana	nucleus	36.5	42.73
VIT_12s0034g00110.t01	Wine grape	nucleus	15.33	42.42
TraesCS1B01G317100.1	Wheat	nucleus	49.27	41.93
VIT_13s0175g00120.t01	Wine grape	nucleus	48.91	41.23
TraesCS3B01G368300.1	Wheat	nucleus	49.63	39.65
KRH44714	Soybean	nucleus	46.72	39.63
KRH62689	Soybean	nucleus	45.62	39.56
KRH56272	Soybean	nucleus	45.62	39.56
KRH13203	Soybean	nucleus	42.34	38.41
TraesCS5B01G139800.1	Wheat	nucleus	43.8	38.34
TraesCS3B01G411300.1	Wheat	nucleus	28.47	31.2
TraesCS1B01G282800.1	Wheat	nucleus	26.64	28.97
Solyc01g009510.1.1	Tomato	nucleus	18.98	27.37
TraesCS7B01G075600.1	Wheat	nucleus	33.58	27.06
TraesCS6B01G364000.1	Wheat	nucleus	32.48	25.36
TraesCS5B01G235600.2	Wheat	nucleus	33.58	25.14
TraesCS3B01G404300.1	Wheat	nucleus	32.12	22.51
TraesCS3B01G404600.1	Wheat	nucleus	31.75	22.48
TraesCS3B01G404200.1	Wheat	nucleus	30.29	21.28
TraesCS3B01G404500.1	Wheat	nucleus	30.29	21.23
TraesCS3B01G404400.1	Wheat	nucleus	30.29	21.23

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	ncoils:Coil	GO:GO:0003674	GO:GO:0003700	GO:GO:0006139
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR004827
PFAM:PF00170	ScanProsite:PS00036	PFscan:PS50217	PANTHER:PTHR22952	PANTHER:PTHR22952:SF211	SMART:SM00338
SUPFAM:SSF57959	EnsemblPlantsGene:TraesCS2B01G115700	EnsemblPlants:TraesCS2B01G115700.1	InterPro:bZIP	TIGR:cd14707	SEG:seg

Description

No Description!

Coordinates

chr2B:+:79247073..79248435

Molecular Weight (calculated)

29568.2 Da

IEP (calculated)

9.956

GRAVY (calculated)

-0.670

Length

274 amino acids

Sequence
(BLAST)

001: MSSLGGAGGG GGGGGPLSRQ GSVYGLTLNE VESHLGEPLR SMNLEDLLRT VLPAADAEPR GAGTGKKTVD EVWRDIESAG RGRQPTVGEM TLEDFLSRAG
101: VPVAGGGGCA GAHWLHQYHP PQQYVTRPLP RPLGVGAGPV LDAVYHGGGG GGFLSQAGGR KRGAAVVGGD GVVEKTVERR QKRMIKNRES AARSRARKQA
201: YTNELENKIS RLEEEIEHLK ELKKLEPVMQ FLPQQEAGER QQQLRRHAVL YMPQPEAEPK QHQHQLRRIN SASF

Best Arabidopsis Sequence Match ( AT2G41070.1 )
(BLAST)

001: MGSIRGNIEE PISQSLTRQN SLYSLKLHEV QTHLGSSGKP LGSMNLDELL KTVLPPAEEG LVRQGSLTLP RDLSKKTVDE VWRDIQQDKN GNGTSTTTTH
101: KQPTLGEITL EDLLLRAGVV TETVVPQENV VNIASNGQWV EYHHQPQQQQ GFMTYPVCEM QDMVMMGGLS DTPQAPGRKR VAGEIVEKTV ERRQKRMIKN
201: RESAARSRAR KQAYTHELEI KVSRLEEENE KLRRLKEVEK ILPSEPPPDP KWKLRRTNSA SL

Arabidopsis Description

EELBasic-leucine zipper (bZIP) transcription factor family protein [Source:TAIR;Acc:AT2G41070]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.