Factsheet for TraesCS5B01G139800.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G141500.1	Wheat	nucleus	99.04	99.04
HORVU5Hr1G045180.1	Barley	nucleus	96.17	96.17
TraesCS5D01G150700.1	Wheat	nucleus	92.33	91.46
VIT_04s0069g01150.t01	Wine grape	nucleus	11.82	64.91
GSMUA_Achr11P...	Banana	nucleus	39.62	51.03
TraesCS1B01G317100.1	Wheat	nucleus	50.16	48.76
GSMUA_AchrUn_...	Banana	nucleus	42.17	48.18
VIT_13s0175g00120.t01	Wine grape	nucleus	46.65	44.92
TraesCS2B01G115700.1	Wheat	nucleus	38.34	43.8
KRH56272	Soybean	nucleus	44.09	43.67
KRH62689	Soybean	nucleus	44.09	43.67
TraesCS3B01G368300.1	Wheat	nucleus	47.6	43.44
TraesCS4B01G175800.1	Wheat	nucleus	29.39	40.89
KRH44714	Soybean	nucleus	41.85	40.56
VIT_12s0034g00110.t01	Wine grape	nucleus	12.78	40.4
KRH13203	Soybean	nucleus	36.74	38.08
TraesCS3B01G411300.1	Wheat	nucleus	22.04	27.6
TraesCS1B01G282800.1	Wheat	nucleus	22.04	27.38
TraesCS7B01G075600.1	Wheat	nucleus	29.39	27.06
TraesCS5B01G235600.2	Wheat	nucleus	29.71	25.41
TraesCS6B01G364000.1	Wheat	nucleus	27.48	24.5
Solyc01g009510.1.1	Tomato	nucleus	14.38	23.68
TraesCS3B01G404600.1	Wheat	nucleus	29.07	23.51
TraesCS3B01G404300.1	Wheat	nucleus	28.75	23.02
TraesCS3B01G404200.1	Wheat	nucleus	28.43	22.82
TraesCS3B01G404500.1	Wheat	nucleus	28.11	22.51
TraesCS3B01G404400.1	Wheat	nucleus	27.8	22.25

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	ncoils:Coil	GO:GO:0003674	GO:GO:0003700	GO:GO:0006139
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR004827
PFAM:PF00170	ScanProsite:PS00036	PFscan:PS50217	PANTHER:PTHR22952	PANTHER:PTHR22952:SF137	SMART:SM00338
SUPFAM:SSF57959	EnsemblPlantsGene:TraesCS5B01G139800	EnsemblPlants:TraesCS5B01G139800.1	InterPro:bZIP	TIGR:cd14707	SEG:seg

Description

No Description!

Coordinates

chr5B:-:263544866..263546840

Molecular Weight (calculated)

34889.3 Da

IEP (calculated)

6.800

GRAVY (calculated)

-0.693

Length

313 amino acids

Sequence
(BLAST)

001: MSSEGGGTAI TGKKRNRAQI QTLVREGSLY NLTLSEVESH LGAPLLSMNL DDFVRSVLPD EKNLPLPNGA GNSGSQSTSA FGLERQGSSI TVPLPLSKKT
101: VDEIWRDIQQ EEESSDDEKR SSGCEAQMSF GEITLEEFLQ RAGIVTGQYQ KDAEELIDLV GTGESAHMMT RVQDFPQGTS AIDAYIVRQS IAQPLSVAIP
201: STMDSIYPDR QMSISSSLEL SDLQSPSRKR MSSQDVVYKV ADRRQKRMIK NRESAARSRA RKQAYTNELE CKLSCLEEEN KRLKREKELD MLLKSAPPPE
301: PKKHLRRTRS TSF

Best Arabidopsis Sequence Match ( AT2G41070.1 )
(BLAST)

001: MGSIRGNIEE PISQSLTRQN SLYSLKLHEV QTHLGSSGKP LGSMNLDELL KTVLPPAEEG LVRQGSLTLP RDLSKKTVDE VWRDIQQDKN GNGTSTTTTH
101: KQPTLGEITL EDLLLRAGVV TETVVPQENV VNIASNGQWV EYHHQPQQQQ GFMTYPVCEM QDMVMMGGLS DTPQAPGRKR VAGEIVEKTV ERRQKRMIKN
201: RESAARSRAR KQAYTHELEI KVSRLEEENE KLRRLKEVEK ILPSEPPPDP KWKLRRTNSA SL

Arabidopsis Description

EELBasic-leucine zipper (bZIP) transcription factor family protein [Source:TAIR;Acc:AT2G41070]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.