Factsheet for TraesCS3B01G368300.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G337200.1	Wheat	nucleus	93.59	94.97
TraesCS3D01G330300.1	Wheat	nucleus	92.13	93.77
HORVU3Hr1G079640.5	Barley	nucleus	83.97	85.46
VIT_04s0069g01150.t01	Wine grape	nucleus	12.83	77.19
EES03785	Sorghum	nucleus	70.85	72.97
Zm00001d043117_P002	Maize	nucleus	67.93	69.97
TraesCS1B01G317100.1	Wheat	nucleus	61.22	65.22
Os01t0813100-00	Rice	nucleus	64.43	63.87
GSMUA_AchrUn_...	Banana	nucleus	50.44	63.14
GSMUA_Achr11P...	Banana	nucleus	44.61	62.96
Zm00001d012538_P001	Maize	nucleus	47.52	58.21
VIT_13s0175g00120.t01	Wine grape	nucleus	52.19	55.08
KRH44714	Soybean	nucleus	49.27	52.32
KRH13203	Soybean	nucleus	46.06	52.32
KRH56272	Soybean	nucleus	47.81	51.9
KRH62689	Soybean	nucleus	47.52	51.58
TraesCS4B01G175800.1	Wheat	nucleus	33.82	51.56
TraesCS2B01G115700.1	Wheat	nucleus	39.65	49.63
TraesCS5B01G139800.1	Wheat	nucleus	43.44	47.6
VIT_12s0034g00110.t01	Wine grape	nucleus	13.7	47.47
TraesCS3B01G411300.1	Wheat	nucleus	24.2	33.2
TraesCS7B01G075600.1	Wheat	nucleus	31.49	31.76
TraesCS5B01G235600.2	Wheat	nucleus	32.65	30.6
TraesCS1B01G282800.1	Wheat	nucleus	22.16	30.16
TraesCS6B01G364000.1	Wheat	nucleus	29.15	28.49
TraesCS3B01G404600.1	Wheat	nucleus	31.78	28.17
TraesCS3B01G404300.1	Wheat	nucleus	31.78	27.88
TraesCS3B01G404200.1	Wheat	nucleus	31.49	27.69
Solyc01g009510.1.1	Tomato	nucleus	15.16	27.37
TraesCS3B01G404400.1	Wheat	nucleus	30.9	27.11
TraesCS3B01G404500.1	Wheat	nucleus	30.9	27.11

Protein Annotations

EnsemblPlants:TraesCS3B01G368300.1	EnsemblPlantsGene:TraesCS3B01G368300	Gene3D:1.20.5.170	GO:GO:0003674	GO:GO:0003700	GO:GO:0006139
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR004827
InterPro:bZIP	ncoils:Coil	PANTHER:PTHR22952	PANTHER:PTHR22952:SF263	PFAM:PF00170	PFscan:PS50217
ScanProsite:PS00036	SMART:SM00338	SUPFAM:SSF57959	TIGR:cd14707	MapMan:15.5.4.1	:

Description

No Description!

Coordinates

chr3B:-:580469002..580472489

Molecular Weight (calculated)

37355.3 Da

IEP (calculated)

9.884

GRAVY (calculated)

-0.671

Length

343 amino acids

Sequence
(BLAST)

001: MGSRKMASQQ GRGDAGTSQP GRGDAGTSQR GQVQSLARQG SLYSLTLDEV QNHLGEPLQS MNLDELLRTV FPDDLEPDGA TTSQCVPSSS LLRQGSITMP
101: TELSKKTVDE VWKGIQETPK RSVQGSGRRK RERQPTLGEM TLEDFLVQAG VVSQGFLKDT SDVGNLGLMG RGATAAGATD LTSGAQWLGQ YQQQIAASAI
201: NTHQHVQQIV PAAYMPIQLV PQPLNVVGPG ATLGSAYSDG QSTSPMISPI SDSQTPGRKR GVSGDVPNKF VERRQKRMIK NRESAARSRA RKQAYTNELE
301: NKVSRLEEEN ERLKKQKELN MMLCSVPLPE PKYQLRRTCS AAF

Best Arabidopsis Sequence Match ( AT3G56850.1 )
(BLAST)

001: MDSQRGIVEQ AKSQSLNRQS SLYSLTLDEV QNHLGSSGKA LGSMNLDELL KSVCSVEANQ PSSMAVNGGA AAQEGLSRQG SLTLPRDLSK KTVDEVWKDI
101: QQNKNGGSAH ERRDKQPTLG EMTLEDLLLK AGVVTETIPG SNHDGPVGGG SAGSGAGLGQ NITQVGPWIQ YHQLPSMPQP QAFMPYPVSD MQAMVSQSSL
201: MGGLSDTQTP GRKRVASGEV VEKTVERRQK RMIKNRESAA RSRARKQAYT HELEIKVSRL EEENERLRKQ KEVEKILPSV PPPDPKRQLR RTSSAPF

Arabidopsis Description

DPBF3ABSCISIC ACID-INSENSITIVE 5-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LES3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.