Factsheet for HORVU5Hr1G068230.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
endoplasmic reticulum 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G235600.2	Wheat	nucleus	93.46	93.72
TraesCS5D01G244500.1	Wheat	nucleus	93.19	93.44
TraesCS5A01G237200.2	Wheat	nucleus	93.46	93.21
Os09t0456200-01	Rice	nucleus	73.3	71.54
EER96850	Sorghum	nucleus	69.21	69.4
Zm00001d020711_P001	Maize	nucleus	64.03	58.02
KRH52002	Soybean	cytosol	14.99	56.12
Zm00001d005884_P002	Maize	nucleus	43.6	52.46
CDY65560	Canola	nucleus	43.05	52.32
CDY28083	Canola	nucleus	33.24	51.48
CDY17109	Canola	nucleus	44.41	48.66
HORVU7Hr1G035500.2	Barley	nucleus	44.14	48.65
HORVU6Hr1G080670.1	Barley	nucleus	46.05	47.34
Bra022409.1-P	Field mustard	nucleus	44.96	46.61
CDX92320	Canola	nucleus	44.96	46.48
CDX99242	Canola	nucleus	44.69	46.33
CDY18575	Canola	nucleus	44.41	46.31
GSMUA_Achr6P30550_001	Banana	nucleus	49.86	45.98
CDY51041	Canola	nucleus	41.14	45.76
GSMUA_Achr5P05690_001	Banana	nucleus	50.14	45.21
Bra040260.1-P	Field mustard	nucleus	44.14	44.51
GSMUA_Achr5P24570_001	Banana	nucleus	46.32	43.81
CDY68227	Canola	nucleus	41.14	43.27
CDY63041	Canola	nucleus	41.69	43.22
Bra001742.1-P	Field mustard	nucleus	41.69	43.1
GSMUA_Achr9P27130_001	Banana	nucleus	47.14	42.93
CDX69020	Canola	nucleus	40.87	42.86
CDX82302	Canola	nucleus	42.23	42.58
GSMUA_Achr6P04270_001	Banana	nucleus	44.41	42.56
Bra037533.1-P	Field mustard	nucleus	44.69	42.27
Bra018800.1-P	Field mustard	nucleus	41.96	41.85
VIT_03s0063g00310.t01	Wine grape	nucleus	46.32	41.56
GSMUA_Achr3P07000_001	Banana	nucleus	45.5	41.44
CDY58256	Canola	nucleus	43.87	41.18
Solyc01g108080.2.1	Tomato	nucleus	46.32	41.06
KRH61298	Soybean	nucleus	46.32	40.77
PGSC0003DMT400066603	Potato	nucleus	45.5	40.34
PGSC0003DMT400059040	Potato	nucleus	40.05	40.16
KRH50289	Soybean	nucleus	45.5	39.39
AT3G19290.3	Thale cress	nucleus	46.32	39.35
VIT_18s0001g10450.t01	Wine grape	nucleus	47.68	39.15
AT1G45249.6	Thale cress	nucleus	45.5	38.75
Solyc04g078840.2.1	Tomato	nucleus	46.59	38.26
CDX72445	Canola	nucleus	42.23	37.8
Solyc10g050210.1.1	Tomato	nucleus	39.78	37.63
KRH71134	Soybean	nucleus	44.96	37.59
PGSC0003DMT400020670	Potato	nucleus	46.32	37.53
HORVU2Hr1G017020.2	Barley	nucleus	11.44	37.5
PGSC0003DMT400015892	Potato	nucleus	41.69	36.96
AT1G49720.2	Thale cress	nucleus	40.33	36.72
Solyc11g044560.1.1	Tomato	nucleus	39.51	36.34
AT4G34000.2	Thale cress	nucleus	44.69	36.12
HORVU1Hr1G068760.1	Barley	nucleus	30.79	34.14
HORVU3Hr1G079640.5	Barley	nucleus	30.79	33.53
Bra011485.1-P	Field mustard	nucleus	40.05	33.49
KRH52003	Soybean	nucleus	29.7	33.13
HORVU3Hr1G083250.2	Barley	nucleus	18.8	31.22
HORVU0Hr1G023640.4	Barley	nucleus	29.16	30.66
HORVU5Hr1G045180.1	Barley	nucleus	25.34	29.71
CDY22378	Canola	nucleus	31.06	28.86
Bra017621.1-P	Field mustard	cytosol	23.43	28.86
AT5G42910.1	Thale cress	nucleus	28.88	28.65
CDX71528	Canola	nucleus	30.52	28.64
Bra033649.1-P	Field mustard	nucleus	30.52	27.05
HORVU3Hr1G084360.2	Barley	nucleus	31.06	26.95
HORVU1Hr1G074960.8	Barley	mitochondrion, nucleus, plastid	15.8	23.11

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	ncoils:Coil	GO:GO:0003674	GO:GO:0003700	GO:GO:0006139
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:HORVU5Hr1G068230
EnsemblPlants:HORVU5Hr1G068230.1	InterPro:IPR004827	UniProt:M0Y7S3	PFAM:PF00170	ScanProsite:PS00036	PFscan:PS50217
PANTHER:PTHR22952	PANTHER:PTHR22952:SF190	SMART:SM00338	SUPFAM:SSF57959	UniParc:UPI000296DE4D	InterPro:bZIP
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrchr5H:+:516536712..516540135

Molecular Weight (calculated)

39335.0 Da

IEP (calculated)

9.609

GRAVY (calculated)

-0.525

Length

367 amino acids

Sequence
(BLAST)

001: MLKEGRWGGP EGVMDFRSSN GGSSSERRPA AEGASLTRQG SIYSLTFEEF QSTLGGGAGV GGGDLGKDFS SMNMDELLRS IWTAEESQAM AASASGAGAD
101: APPMSLQGQG SLTLPRTLSA KTVDEVWRNL VRDDPLPVGA EGAEPQPHRQ ATLGEMTLEE FLVKAGVVRE IPTAPAVPPP PMQPRPVPVA PKGATFYGNF
201: PSANDVGTAA LGFPPVAMGD LALGNGLMPR ALGMGGAPLV VQTAVKPVDS GSKGSEDLSS PSEPMPYSFE GIVRGRRTGG GVEKVVERRQ RRMIKNRESA
301: ARSRARKQAY TMELEAEVQK LKDLNEELVK KQTEILKMQK REQAPEMKDQ FGRKKRQCLR RTLTGPW

Best Arabidopsis Sequence Match ( AT4G34000.2 )
(BLAST)

001: MGSRLNFKSF VDGVSEQQPT VGTSLPLTRQ NSVFSLTFDE FQNSWGGGIG KDFGSMNMDE LLKNIWTAEE SHSMMGNNTS YTNISNGNSG NTVINGGGNN
101: IGGLAVGVGG ESGGFFTGGS LQRQGSLTLP RTISQKRVDD VWKELMKEDD IGNGVVNGGT SGIPQRQQTL GEMTLEEFLV RAGVVREEPQ PVESVTNFNG
201: GFYGFGSNGG LGTASNGFVA NQPQDLSGNG VAVRQDLLTA QTQPLQMQQP QMVQQPQMVQ QPQQLIQTQE RPFPKQTTIA FSNTVDVVNR SQPATQCQEV
301: KPSILGIHNH PMNNNLLQAV DFKTGVTVAA VSPGSQMSPD LTPKSALDAS LSPVPYMFGR VRKTGAVLEK VIERRQKRMI KNRESAARSR ARKQAYTMEL
401: EAEIAQLKEL NEELQKKQVE IMEKQKNQLL EPLRQPWGMG CKRQCLRRTL TGPW

Arabidopsis Description

ABF3ABSCISIC ACID-INSENSITIVE 5-like protein 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9M7Q3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.