Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 1
- nucleus 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES03943 | Sorghum | nucleus | 92.69 | 91.98 |
| Zm00001d012273_P001 | Maize | plastid | 70.77 | 75.41 |
| HORVU3Hr1G083250.2 | Barley | nucleus | 61.92 | 72.85 |
| TraesCS3D01G371900.1 | Wheat | nucleus | 68.85 | 71.6 |
| Os01t0867300-01 | Rice | nucleus | 73.08 | 71.43 |
| TraesCS3B01G411300.1 | Wheat | nucleus | 68.46 | 71.2 |
| TraesCS3A01G378700.1 | Wheat | nucleus | 69.62 | 70.43 |
| Zm00001d038311_P001 | Maize | nucleus | 57.69 | 59.06 |
| GSMUA_Achr3P22470_001 | Banana | nucleus | 51.54 | 52.34 |
| GSMUA_Achr9P08900_001 | Banana | nucleus | 49.23 | 51.61 |
| KRH10463 | Soybean | nucleus | 24.62 | 49.23 |
| GSMUA_Achr10P... | Banana | nucleus | 49.23 | 47.94 |
| GSMUA_Achr2P20490_001 | Banana | nucleus | 43.46 | 46.5 |
| KRH43979 | Soybean | nucleus | 28.46 | 46.25 |
| VIT_18s0072g00470.t01 | Wine grape | nucleus, plastid | 43.46 | 41.09 |
| VIT_12s0055g00420.t01 | Wine grape | nucleus | 43.46 | 37.79 |
| PGSC0003DMT400076576 | Potato | nucleus | 41.15 | 37.68 |
| KRH58352 | Soybean | nucleus | 32.31 | 37.5 |
| Solyc01g104650.2.1 | Tomato | nucleus | 41.92 | 36.7 |
| KRH35126 | Soybean | nucleus | 34.62 | 36.44 |
| KRH42235 | Soybean | nucleus, plastid | 32.31 | 35.15 |
| CDY22311 | Canola | nucleus, plastid | 35.38 | 34.59 |
| Solyc04g071510.2.1 | Tomato | nucleus, plastid | 40.77 | 34.42 |
| Bra033719.1-P | Field mustard | nucleus, plastid | 34.62 | 33.83 |
| CDY54481 | Canola | nucleus | 36.92 | 33.57 |
| AT1G03970.1 | Thale cress | nucleus, plastid | 34.23 | 32.96 |
| Bra015281.1-P | Field mustard | nucleus, plastid | 33.85 | 32.84 |
| CDY18197 | Canola | nucleus, plastid | 33.85 | 32.71 |
| CDX89852 | Canola | nucleus, plastid | 33.46 | 32.46 |
| AT5G44080.1 | Thale cress | nucleus | 38.85 | 32.06 |
| Zm00001d022550_P001 | Maize | nucleus | 29.23 | 26.67 |
| Zm00001d043117_P002 | Maize | nucleus | 33.85 | 26.43 |
| Zm00001d010638_P001 | Maize | nucleus | 31.92 | 24.13 |
| Zm00001d037170_P001 | Maize | nucleus | 31.15 | 23.96 |
| Zm00001d044940_P002 | Maize | nucleus | 30.77 | 22.79 |
| Zm00001d018178_P001 | Maize | nucleus | 30.38 | 22.51 |
| Zm00001d012538_P001 | Maize | nucleus | 23.85 | 22.14 |
| Zm00001d012296_P001 | Maize | nucleus | 33.85 | 21.36 |
| Zm00001d042779_P001 | Maize | nucleus | 28.46 | 19.32 |
| Zm00001d050018_P007 | Maize | nucleus | 27.31 | 18.16 |
| Zm00001d020711_P001 | Maize | nucleus | 28.08 | 18.02 |
| Zm00001d031790_P002 | Maize | nucleus | 24.23 | 17.65 |
| Zm00001d005884_P002 | Maize | nucleus | 20.0 | 17.05 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | UniProt:B7ZXV7 | EMBL:BT054149 | EMBL:BT055944 | ncoils:Coil |
| GO:GO:0003674 | GO:GO:0003700 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | EMBL:HQ858684 | InterPro:IPR004827 | ProteinID:ONM36161.1 | PFAM:PF00170 |
| ScanProsite:PS00036 | PFscan:PS50217 | PANTHER:PTHR22952 | PANTHER:PTHR22952:SF175 | SMART:SM00338 | SUPFAM:SSF57959 |
| UniParc:UPI00019170FD | EnsemblPlantsGene:Zm00001d042721 | EnsemblPlants:Zm00001d042721_P001 | EnsemblPlants:Zm00001d042721_T001 | InterPro:bZIP | SEG:seg |
Description
bZIP-transcription factor 95G-box-binding factor 4
Coordinates
chr3:+:178186600..178189773
Molecular Weight (calculated)
27554.7 Da
IEP (calculated)
9.594
GRAVY (calculated)
-0.673
Length
260 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSRVMPSS SPSHTASDLA RLAQAASRPG GGGSGLGSMN VEELLRGIYS DMPTPAPPAS EPERPRSPAP APEVATRRTA EEVWKEITGG GGSGEPVPPV
101: AAQAAVPAGG GGAGGPEMTL EDFLAREEGA VKEDGVRVSG PSAPAMGFLG GAEGVGVPGG GGGRGRKRQL MDPVDRAAMQ RQKRMIKNRE SAARSRERKQ
201: AYIAELESLV THLEEENAEL LREQEERHQK RLKELLERVT PVILRKKPSG DLRRTNSMQW
101: AAQAAVPAGG GGAGGPEMTL EDFLAREEGA VKEDGVRVSG PSAPAMGFLG GAEGVGVPGG GGGRGRKRQL MDPVDRAAMQ RQKRMIKNRE SAARSRERKQ
201: AYIAELESLV THLEEENAEL LREQEERHQK RLKELLERVT PVILRKKPSG DLRRTNSMQW
001: MASFKLMSSS NSDLSRRNSS SASSSPSIRS SHHLRPNPHA DHSRISFAYG GGVNDYTFAS DSKPFEMAID VDRSIGDRNS VNNGKSVDDV WKEIVSGEQK
101: TIMMKEEEPE DIMTLEDFLA KAEMDEGASD EIDVKIPTER LNNDGSYTFD FPMQRHSSFQ MVEGSMGGGV TRGKRGRVMM EAMDKAAAQR QKRMIKNRES
201: AARSRERKQA YQVELETLAA KLEEENEQLL KEIEESTKER YKKLMEVLIP VDEKPRPPSR PLSRSHSLEW
101: TIMMKEEEPE DIMTLEDFLA KAEMDEGASD EIDVKIPTER LNNDGSYTFD FPMQRHSSFQ MVEGSMGGGV TRGKRGRVMM EAMDKAAAQR QKRMIKNRES
201: AARSRERKQA YQVELETLAA KLEEENEQLL KEIEESTKER YKKLMEVLIP VDEKPRPPSR PLSRSHSLEW
Arabidopsis Description
GBF4G-box-binding factor 4 [Source:UniProtKB/Swiss-Prot;Acc:P42777]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.