Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 3
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra035027.1-P | Field mustard | cytosol | 86.62 | 99.62 |
| CDX88436 | Canola | cytosol | 85.95 | 98.85 |
| CDX68022 | Canola | cytosol | 83.28 | 95.77 |
| CDX79255 | Canola | cytosol | 83.28 | 95.77 |
| CDY14618 | Canola | cytosol | 81.27 | 93.46 |
| AT1G78300.1 | Thale cress | cytosol | 80.6 | 93.05 |
| CDY12024 | Canola | cytosol | 76.92 | 88.12 |
| CDX73313 | Canola | cytosol | 74.92 | 84.53 |
| PGSC0003DMT400041810 | Potato | cytosol | 72.91 | 84.5 |
| PGSC0003DMT400060654 | Potato | cytosol | 71.91 | 84.31 |
| Solyc04g012120.2.1 | Tomato | extracellular, nucleus | 71.57 | 83.92 |
| CDY41483 | Canola | cytosol | 72.58 | 83.78 |
| CDX91676 | Canola | cytosol | 71.91 | 83.01 |
| CDY28408 | Canola | cytosol | 72.91 | 82.89 |
| CDY71290 | Canola | cytosol | 70.23 | 81.71 |
| CDY46646 | Canola | cytosol | 70.9 | 81.54 |
| CDY00447 | Canola | cytosol | 70.9 | 81.54 |
| CDY51543 | Canola | cytosol | 70.9 | 81.23 |
| CDX74252 | Canola | cytosol | 70.9 | 81.23 |
| CDX67405 | Canola | cytosol | 69.9 | 81.01 |
| CDX91996 | Canola | cytosol | 70.57 | 80.84 |
| CDY28698 | Canola | cytosol | 70.57 | 80.84 |
| CDX74521 | Canola | cytosol | 69.23 | 80.54 |
| CDY01659 | Canola | cytosol | 68.9 | 80.16 |
| Solyc11g010200.1.1 | Tomato | nucleus | 70.23 | 78.07 |
| CDX81287 | Canola | cytosol | 62.54 | 75.1 |
| CDY40098 | Canola | cytosol | 62.21 | 75.0 |
| CDX85759 | Canola | cytosol | 62.21 | 75.0 |
| CDY14562 | Canola | cytosol | 62.21 | 75.0 |
| CDY54716 | Canola | cytosol | 62.21 | 74.7 |
| CDY08794 | Canola | cytosol | 61.87 | 74.6 |
| CDX78381 | Canola | cytosol | 61.54 | 73.6 |
| CDX81179 | Canola | cytosol | 61.54 | 73.6 |
| CDX97016 | Canola | cytosol | 54.18 | 71.05 |
| CDY69181 | Canola | cytosol | 55.18 | 65.22 |
| CDY38227 | Canola | cytosol | 54.85 | 64.82 |
| CDY16161 | Canola | cytosol | 58.19 | 64.68 |
| CDX85023 | Canola | cytosol | 57.86 | 64.07 |
| CDY40251 | Canola | cytosol | 51.17 | 62.45 |
| CDY61201 | Canola | cytosol | 55.18 | 60.66 |
| CDY42826 | Canola | cytosol | 54.52 | 60.15 |
| KRH05108 | Soybean | cytosol | 31.44 | 59.12 |
| Zm00001d013429_P001 | Maize | extracellular | 22.74 | 58.62 |
| CDY20560 | Canola | cytosol | 51.17 | 57.3 |
| CDY48771 | Canola | cytosol | 34.11 | 56.04 |
| CDY61631 | Canola | cytosol | 57.86 | 52.74 |
| CDY24128 | Canola | cytosol | 57.53 | 52.44 |
| CDY56386 | Canola | mitochondrion | 34.11 | 51.78 |
| CDY52206 | Canola | mitochondrion | 34.11 | 51.78 |
| CDX91673 | Canola | cytosol | 43.81 | 48.7 |
| GSMUA_Achr3P17880_001 | Banana | cytosol | 28.43 | 48.3 |
| CDX87464 | Canola | cytosol | 33.44 | 47.17 |
| CDX88428 | Canola | cytosol | 36.45 | 45.23 |
| CDX97014 | Canola | cytosol, plastid | 16.39 | 44.55 |
| CDY03135 | Canola | cytosol | 52.17 | 39.59 |
| VIT_00s0199g00140.t01 | Wine grape | cytosol | 46.49 | 23.92 |
Protein Annotations
| Gene3D:1.20.190.20 | InterPro:14-3-3 | InterPro:14-3-3_CS | InterPro:14-3-3_dom_sf | InterPro:14-3-3_domain | MapMan:35.1 |
| GO:A0A078DDZ0 | EnsemblPlants:CDX87455 | ProteinID:CDX87455 | ProteinID:CDX87455.1 | ncoils:Coil | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0019904 | EnsemblPlantsGene:GSBRNA2T00146436001 | InterPro:IPR036815 | PFAM:PF00244 |
| PIRSF:PIRSF000868 | PRINTS:PR00305 | ScanProsite:PS00796 | ScanProsite:PS00797 | PANTHER:PTHR18860 | PANTHER:PTHR18860:SF26 |
| SMART:SM00101 | SUPFAM:SSF48445 | UniParc:UPI0004EDC276 | : | : | : |
Description
BnaA07g34180D
Coordinates
chrLK031850:-:702438..704734
Molecular Weight (calculated)
33659.6 Da
IEP (calculated)
4.651
GRAVY (calculated)
-0.484
Length
299 amino acids
Sequence
(BLAST)
(BLAST)
001: MKYKFCLAET NPTAHIQSRF QISLSSSKNA FIASQISKKM AVSAREEYVY MAKLAEQAER YEEMVEFMEK VSAAIDGDEL TVEERNLLSV AYKNVIGARR
101: ASWRIISSIE QKEESRGNDD HVKAIRDYRA KIETELSGIC DGILKLLDDR LVPAAGSGDS KVFYLKMKGD YHRYLAEFKT GQERKDAAEN TLSAYKAAQD
201: IANAELAPTH PIRLGLALNF SVFYYEILNS PDRACSLAKQ AFDEAIAELD TLGEESYKDS TLIMQLLRDN LTLWTSDMQD DDAGEEIKES SAPKPTEEQ
101: ASWRIISSIE QKEESRGNDD HVKAIRDYRA KIETELSGIC DGILKLLDDR LVPAAGSGDS KVFYLKMKGD YHRYLAEFKT GQERKDAAEN TLSAYKAAQD
201: IANAELAPTH PIRLGLALNF SVFYYEILNS PDRACSLAKQ AFDEAIAELD TLGEESYKDS TLIMQLLRDN LTLWTSDMQD DDAGEEIKES SAPKPTEEQ
001: MASGREEFVY MAKLAEQAER YEEMVEFMEK VSAAVDGDEL TVEERNLLSV AYKNVIGARR ASWRIISSIE QKEESRGNDD HVTAIREYRS KIETELSGIC
101: DGILKLLDSR LIPAAASGDS KVFYLKMKGD YHRYLAEFKT GQERKDAAEH TLAAYKSAQD IANAELAPTH PIRLGLALNF SVFYYEILNS PDRACNLAKQ
201: AFDEAIAELD TLGEESYKDS TLIMQLLRDN LTLWTSDMQD DAADEIKEAA APKPTEEQQ
101: DGILKLLDSR LIPAAASGDS KVFYLKMKGD YHRYLAEFKT GQERKDAAEH TLAAYKSAQD IANAELAPTH PIRLGLALNF SVFYYEILNS PDRACNLAKQ
201: AFDEAIAELD TLGEESYKDS TLIMQLLRDN LTLWTSDMQD DAADEIKEAA APKPTEEQQ
Arabidopsis Description
GRF214-3-3-like protein GF14 omega [Source:UniProtKB/Swiss-Prot;Acc:Q01525]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.