Skip to main content
crop-pal logo
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 4
  • golgi 4
  • cytosol 3
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, secretory
BaCelLo:secretory
MultiLoc:cytosol
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr11P... Banana cytosol 70.98 55.02
CDY07313 Canola cytosol 46.88 39.62
CDX71467 Canola cytosol 53.12 36.73
CDX93563 Canola endoplasmic reticulum 20.09 23.08
CDY17964 Canola cytosol 79.02 19.98
CDX90906 Canola cytosol 79.02 19.98
CDX97296 Canola cytosol 77.68 19.91
AT4G03080.1 Thale cress cytosol 78.12 19.86
CDY62088 Canola cytosol 77.23 19.73
Solyc09g074320.2.1 Tomato plastid 72.77 19.29
EES17694 Sorghum cytosol 76.34 19.28
VIT_07s0104g01030.t01 Wine grape cytosol 76.34 19.26
Os05t0144400-01 Rice plasma membrane 75.89 19.25
KRH71506 Soybean cytosol 75.0 19.07
KRH31949 Soybean nucleus 75.0 19.07
HORVU1Hr1G019330.18 Barley cytosol 75.45 18.97
TraesCS1B01G107000.3 Wheat cytosol 74.55 18.68
TraesCS1A01G088000.2 Wheat cytosol 75.0 17.43
TraesCS1D01G089300.2 Wheat cytosol 75.0 17.43
Zm00001d010887_P002 Maize plastid 76.34 17.03
CDY29598 Canola cytosol 50.45 15.92
CDY57791 Canola cytosol 70.09 15.75
CDY57485 Canola cytosol 69.64 15.63
CDY06313 Canola cytosol 67.86 15.32
CDY22684 Canola cytosol 67.86 15.28
CDY31148 Canola cytosol 67.41 15.25
CDX97481 Canola cytosol 67.41 15.22
CDY25481 Canola cytosol 13.84 13.78
CDY60048 Canola cytosol 24.55 13.51
CDX81202 Canola cytosol 24.55 13.51
CDY59015 Canola cytosol, endoplasmic reticulum 13.84 11.52
CDY50823 Canola cytosol 22.77 10.6
CDX79854 Canola cytosol 22.77 10.54
CDY47990 Canola cytosol 22.77 9.44
CDY14856 Canola cytosol, endoplasmic reticulum 22.77 8.85
CDX85736 Canola cytosol 21.43 7.69
CDY40129 Canola plastid 20.54 6.95
CDX93646 Canola nucleus 25.0 5.02
CDY43305 Canola extracellular 25.0 5.01
CDX71469 Canola cytosol 4.46 2.42
GSMUA_Achr11P... Banana cytosol 4.91 2.02
Protein Annotations
KEGG:04658+3.1.3.16KEGG:04660+3.1.3.16Gene3D:3.60.21.10MapMan:50.3.1GO:A0A078FY73UniProt:A0A078FY73
EnsemblPlants:CDY17966ProteinID:CDY17966ProteinID:CDY17966.1InterPro:Calcineurin-like_PHP_ApaHGO:GO:0003674GO:GO:0003824
GO:GO:0016787EnsemblPlantsGene:GSBRNA2T00002335001InterPro:IPR029052InterPro:Metallo-depent_PP-likePFAM:PF00149PRINTS:PR00114
PANTHER:PTHR11668PANTHER:PTHR11668:SF243SMART:SM00156SUPFAM:SSF56300InterPro:Ser/Thr-sp_prot-phosphataseUniParc:UPI0004EDEA28
SEG:seg:::::
Description
BnaC03g30380DBnaC03g30380D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FY73]
Coordinates
chrLK032080:+:199077..203757
Molecular Weight (calculated)
25297.6 Da
IEP (calculated)
6.081
GRAVY (calculated)
-0.142
Length
224 amino acids
Sequence
(BLAST)
001: MVCFGFLSII KEYYPLSLYG PEIVPLQIEY PENVHLFRGN HEAADINALF GFRLECIERM GESDGIWAWT RFNHLPLAAL IENKIICMHG LRPNARGSGL
101: VTFGPDRVTE FCKKNKLQPN IRAHECVMDE LDRFAQGQLI TLFSATNYCG MANNAGAILV VGRGLVIVPK LIHPLPPPIL SPEHSGDDAW MQDMYSSGTR
201: RETFSYHELN IQRPPTPTRD DEVL
Best Arabidopsis Sequence Match ( AT1G08420.1 )
(BLAST)
0001: MDEDSSMVAD NDQDREFQSL DGGQSPSPME RETPQQMNDQ SPPPEGGSVP TPPPSDPNPA TSQQQAAAVV GQEQQPALVV GPRCAPTYSV VDAMMDKKED
0101: GPGPRCGHTL TAVPAVGDEG TPGYIGPRLV LFGGATALEG NSGGTGTPTS AGSAGIRLAG ATADVHCYDV LSNKWTRLTP FGEPPTPRAA HVATAVGTMV
0201: VIQGGIGPAG LSAEDLHVLD LTQQRPRWHR VVVQGPGPGP RYGHVMALVG QRYLMAIGGN DGKRPLADVW ALDTAAKPYE WRKLEPEGEG PPPCMYATAS
0301: ARSDGLLLLC GGRDANSVPL ASAYGLAKHR DGRWEWAIAP GVSPSSRYQH AAVFVNARLH VSGGALGGGR MVEDSSSVAV LDTAAGVWCD TKSVVTSPRT
0401: GRYSADAAGG DASVELTRRC RHAAAAVGDL IFIYGGLRGG VLLDDLLVAE DLAAAETTYA ASHAAAAAAT NSPPGRLPGR YGFSDERNRE LSESAADGAV
0501: VLGSPVAPPV NGDMHTDISP ENALLPGTRR TNKGVEYLVE ASAAEAEAIS ATLAAAKARQ VNGEVELPDR DCGAEATPSG KPTFSLIKPD SMGSMSVTPA
0601: GIRLHHRAVV VAAETGGALG GMVRQLSIDQ FENEGRRVSY GTPESATAAR KLLDRQMSIN SVPKKVIAHL LKPRGWKPPV RRQFFLDCNE IADLCDSAER
0701: IFASEPTVLQ LKAPIKIFGD LHGQFGDLMR LFDEYGSPST AGDISYIDYL FLGDYVDRGQ HSLETISLLL ALKVEYQHNV HLIRGNHEAA DINALFGFRI
0801: ECIERMGERD GIWVWHRINR LFNWLPLAAS IEKKIICMHG GIGRSINHVE QIENIQRPIT MEAGSIVLMD LLWSDPTEND SVEGLRPNAR GPGLVTFGPD
0901: RVMEFCNNND LQLIVRAHEC VMDGFERFAQ GHLITLFSAT NYCGTANNAG AILVLGRDLV VVPKLIHPLP PALSSPETSP ERHIEDTWMQ ELNANRPATP
1001: TRGRPQNSND RGGSLAWM
Arabidopsis Description
BSL2Serine/threonine-protein phosphatase BSL2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJF0]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.