CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytoskeleton
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra004718.1-P	Field mustard	cytosol	99.17	98.55
CDX79854	Canola	cytosol	99.17	98.55
VIT_12s0142g00720.t01	Wine grape	cytosol, golgi, mitochondrion, plastid	43.66	88.24
CDY47990	Canola	cytosol	95.01	84.63
HORVU3Hr1G026470.1	Barley	cytosol	80.04	83.33
AT2G42810.2	Thale cress	cytosol	92.93	83.09
GSMUA_Achr6P05530_001	Banana	cytosol	84.82	82.42
TraesCS3D01G139500.1	Wheat	cytosol	82.33	81.99
TraesCS3A01G139200.1	Wheat	golgi	82.33	81.99
TraesCS3B01G156800.1	Wheat	cytosol	82.12	81.78
EES17868	Sorghum	cytosol	81.5	81.33
CDY14856	Canola	cytosol, endoplasmic reticulum	95.43	79.69
Os05t0204900-01	Rice	cytosol, plasma membrane	79.21	78.88
Solyc07g055860.2.1	Tomato	cytosol	86.9	78.57
KRH46082	Soybean	cytosol	85.86	76.48
KRG98883	Soybean	cytosol	85.24	75.93
PGSC0003DMT400044699	Potato	cytosol	87.11	75.77
Zm00001d037734_P011	Maize	endoplasmic reticulum	79.42	74.17
CDY25481	Canola	cytosol	29.52	63.11
CDY59015	Canola	cytosol, endoplasmic reticulum	25.78	46.1
CDX81202	Canola	cytosol	24.53	28.99
CDY60048	Canola	cytosol	24.32	28.75
CDY07313	Canola	cytosol	15.38	27.92
CDX71467	Canola	cytosol	17.05	25.31
CDY17966	Canola	cytosol	10.6	22.77
CDX93563	Canola	endoplasmic reticulum	8.73	21.54
CDX85736	Canola	cytosol	20.58	15.87
CDY29598	Canola	cytosol	22.04	14.93
CDY17964	Canola	cytosol	27.03	14.67
CDX90906	Canola	cytosol	27.03	14.67
CDY40129	Canola	plastid	20.17	14.65
CDY62088	Canola	cytosol	24.95	13.68
CDX97296	Canola	cytosol	24.74	13.62
CDY57791	Canola	cytosol	27.86	13.44
CDY57485	Canola	cytosol	27.86	13.43
CDY06313	Canola	cytosol	27.23	13.21
CDY22684	Canola	cytosol	27.23	13.17
CDY31148	Canola	cytosol	27.03	13.13
CDX97481	Canola	cytosol	27.03	13.1
CDX93646	Canola	nucleus	25.36	10.93
CDY43305	Canola	extracellular	25.16	10.83
CDX71469	Canola	cytosol	6.03	7.0

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	Gene3D:1.25.40.10	MapMan:18.4.24.1.4	Gene3D:3.60.21.10	GO:A0A078IP09
UniProt:A0A078IP09	EnsemblPlants:CDY50823	ProteinID:CDY50823	ProteinID:CDY50823.1	InterPro:Calcineurin-like_PHP_ApaH	ncoils:Coil
GO:GO:0003674	GO:GO:0003824	GO:GO:0004721	GO:GO:0005488	GO:GO:0005515	GO:GO:0006464
GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538
EnsemblPlantsGene:GSBRNA2T00097549001	InterPro:IPR011990	InterPro:IPR013026	InterPro:IPR019734	InterPro:IPR029052	InterPro:Metallo-depent_PP-like
PFAM:PF00149	PFAM:PF00515	PFAM:PF08321	PFAM:PF13181	PIRSF:PIRSF033096	InterPro:PPP_dom
PRINTS:PR00114	PFscan:PS50005	PFscan:PS50293	PANTHER:PTHR11668	PANTHER:PTHR11668:SF391	SMART:SM00028
SMART:SM00156	SUPFAM:SSF48452	SUPFAM:SSF56300	InterPro:Ser/Thr-sp_prot-phosphatase	InterPro:Ser/Thr_PPase_5	InterPro:TPR-contain_dom
InterPro:TPR-like_helical_dom_sf	InterPro:TPR_1	InterPro:TPR_repeat	UniParc:UPI0004EC1AE2	:	:

Description

BnaC04g52600DBnaC04g52600D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IP09]

Coordinates

chrLK032942:-:57342..61091

Molecular Weight (calculated)

54451.9 Da

IEP (calculated)

5.822

GRAVY (calculated)

-0.349

Length

481 amino acids

Sequence
(BLAST)

001: METENDVSRA EEMKNQANEA FKGHKFSQAI DLYTQAIELN GNNAVYWANR AFAHTKLEEY GSAIQDASKA IEVDPKYSKG YYRRGAAYLA MGKFKDALKD
101: FQQVKRICPN DPDATRKLRE CEKAVKKLKF EEAISVPVSE RISVAESIDF HTIEVESQYS GARIEGEEVT LDFVKQMLEE FKNQKTLHKR YAYQIVLQTR
201: KILQALPSLV DISVPNGKHF TVCGDVHGQF YDLLNIFELN GLPSEENPYL FNGDFVDRGS FSVEIILTLF AFKCMSPSSI YLARGNHESK SMNKIYGFEG
301: EVRSKLSEKF VELFAEVFCY LPLAHVINQK IFVVHGGLFS VDGVKLSDIR AIDRFCEPPE EGLMCELLWS DPQSLPGRGP SKRGVGLSFG GDVTKRFLED
401: NNLDLVVRSH EVKDEGYEVD HDGKLITVFS APNYCDQMGN KGAFIRFEAP DMKPNIVTFT AVPHPDVKPM AYASNFMRMF N

Best Arabidopsis Sequence Match ( AT2G42810.1 )
(BLAST)

001: METKNENSDV SRAEEFKSQA NEAFKGHKYS SAIDLYTKAI ELNSNNAVYW ANRAFAHTKL EEYGSAIQDA SKAIEVDSRY SKGYYRRGAA YLAMGKFKDA
101: LKDFQQVKRL SPNDPDATRK LKECEKAVMK LKFEEAISVP VSERRSVAES IDFHTIEVEP QYSGARIEGE EVTLDFVKTM MEDFKNQKTL HKRYAYQIVL
201: QTRQILLALP SLVDISVPHG KHITVCGDVH GQFYDLLNIF ELNGLPSEEN PYLFNGDFVD RGSFSVEIIL TLFAFKCMCP SSIYLARGNH ESKSMNKIYG
301: FEGEVRSKLS EKFVDLFAEV FCYLPLAHVI NGKVFVVHGG LFSVDGVKLS DIRAIDRFCE PPEEGLMCEL LWSDPQPLPG RGPSKRGVGL SFGGDVTKRF
401: LQDNNLDLLV RSHEVKDEGY EVEHDGKLIT VFSAPNYCDQ MGNKGAFIRF EAPDMKPNIV TFSAVPHPDV KPMAYANNFL RMFN

Arabidopsis Description

PAPP5Serine/threonine-protein phosphatase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q84XU2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.