Factsheet for Solyc07g055860.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
nucleus 1
mitochondrion 1
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

cytosol: 19036844
nucleus: 19036844
plasma membrane: 19036844

gfp PMID: 19036844 doi

Z Lin, L Arciga-Reyes, S Zhong, L Alexander, R Hackett, I Wilson, D Grierson

Plant and Crop Sciences Division, School of Biosciences, University of Nottingham, Sutton Bonington Campus, Loughborough LE12 5RD, UK.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_12s0142g00720.t01	Wine grape	cytosol, golgi, mitochondrion, plastid	41.54	92.86
PGSC0003DMT400044699	Potato	cytosol	90.98	87.52
Bra004718.1-P	Field mustard	cytosol	79.32	87.19
CDX79854	Canola	cytosol	79.32	87.19
CDY50823	Canola	cytosol	78.57	86.9
GSMUA_Achr6P05530_001	Banana	cytosol	77.82	83.64
HORVU3Hr1G026470.1	Barley	cytosol	72.56	83.55
TraesCS3D01G139500.1	Wheat	cytosol	75.19	82.82
TraesCS3A01G139200.1	Wheat	golgi	75.19	82.82
TraesCS3B01G156800.1	Wheat	cytosol	75.0	82.61
EES17868	Sorghum	cytosol	74.44	82.16
Os05t0204900-01	Rice	cytosol, plasma membrane	73.5	80.95
AT2G42810.2	Thale cress	cytosol	81.02	80.11
KRH46082	Soybean	cytosol	81.2	80.0
KRG98883	Soybean	cytosol	81.02	79.81
CDY47990	Canola	cytosol	79.89	78.7
Zm00001d037734_P011	Maize	endoplasmic reticulum	72.56	74.95
CDY14856	Canola	cytosol, endoplasmic reticulum	80.08	73.96
CDY25481	Canola	cytosol	25.94	61.33
Bra016856.1-P	Field mustard	endoplasmic reticulum, golgi	80.26	60.74
CDY59015	Canola	cytosol, endoplasmic reticulum	23.68	46.84
Solyc02g082230.2.1	Tomato	cytosol, plastid	23.87	27.67
Bra006495.1-P	Field mustard	cytosol	44.92	24.92
Solyc09g074320.2.1	Tomato	plastid	22.93	14.44
Solyc11g071920.1.1	Tomato	extracellular	26.5	14.17
Solyc01g009280.2.1	Tomato	cytosol	25.56	13.79
Solyc06g073960.2.1	Tomato	extracellular	25.75	13.76

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	Gene3D:1.25.40.10	MapMan:18.4.24.1.4	Gene3D:3.60.21.10	InterPro:Calcineurin-like_PHP_ApaH
ncoils:Coil	GO:GO:0003674	GO:GO:0003824	GO:GO:0004721	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005635	GO:GO:0005654
GO:GO:0005737	GO:GO:0005783	GO:GO:0005789	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016607	GO:GO:0016787
GO:GO:0019538	GO:GO:0031965	GO:GO:0046872	InterPro:IPR000909	InterPro:IPR011990	InterPro:IPR013026
InterPro:IPR019734	InterPro:IPR029052	UniProt:K4CGB9	InterPro:Metallo-depent_PP-like	PFAM:PF00149	PFAM:PF00515
PFAM:PF08321	PFAM:PF13432	PIRSF:PIRSF033096	InterPro:PLipase_C_PInositol-sp_X_dom	InterPro:PPP_dom	PRINTS:PR00114
PFscan:PS50005	PFscan:PS50007	PFscan:PS50293	PANTHER:PTHR11668	PANTHER:PTHR11668:SF391	SMART:SM00028
SMART:SM00156	SUPFAM:SSF48452	SUPFAM:SSF56300	InterPro:Ser/Thr-sp_prot-phosphatase	InterPro:Ser/Thr_PPase_5	EnsemblPlantsGene:Solyc07g055860.2
EnsemblPlants:Solyc07g055860.2.1	InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf	InterPro:TPR_1	InterPro:TPR_repeat	UniParc:UPI000276AC43
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr7:-:63773890..63783760

Molecular Weight (calculated)

59544.1 Da

IEP (calculated)

6.243

GRAVY (calculated)

-0.283

Length

532 amino acids

Sequence
(BLAST)

001: MPGMEAENSN ASRAEELKQL ANEAFKGHKY SQAIDLYTQA IELNGENAVY YANRAFAHSK LEEYGSAIQD GTRAIEIDPR YSKGYYRRGA AYLAMGKFKD
101: ALKDFQQVKK LCPNDPDATK KLKECEKAVM KLKFEEAISV PESQRRSVAD SIDYRSVVSI RPWLIICSHQ NNCCISGSSH NGGSSSFGSL IGGLDNISLG
201: TLHLQVEPQY AGARIEGDVV TLDFVKKMLD DFKNQKNLHK RYAYQIVLQT REMLRALPSL VDIVVPEGKH FTVCGDVHGQ FYDLLNIFEL NGLPSEDNPY
301: LFNGDFVDRG SFSLEVILTL FAFKCMCPSA IHLARGNHES KSMNKIYGFE GEVRSKLSEI FVELFAEVFC CLPLAHVINE KVFVVHGGLF SVDGVKLSDI
401: RAIDRFCEPP EEGLMCELLW SDPQPQPGRG PSKRGVGLSF GGDVTKRFLQ ENNLDLVVRS HEVKDEGYEI EHDGKLITVF SAPNYCDQMG NKGAFIRFEA
501: PDMKPNIVTF SAVPHPDVKP MAYANNFLRM FS

Best Arabidopsis Sequence Match ( AT2G42810.3 )
(BLAST)

001: METKNENSDV SRAEEFKSQA NEAFKGHKYS SAIDLYTKAI ELNSNNAVYW ANRAFAHTKL EEYGSAIQDA SKAIEVDSRY SKGYYRRGAA YLAMGKFKDA
101: LKDFQQVKRL SPNDPDATRK LKECEKAVMK LKFEEAISVP VSERRSVAES IDFHTIGNKP RSSSMPTKTA LAAVVAAVMV VAVRGFATTE ILMVLVSVVL
201: GTFWWGSFSE VEPQYSGARI EGEEVTLDFV KTMMEDFKNQ KTLHKRYAYQ IVLQTRQILL ALPSLVDISV PHGKHITVCG DVHGQFYDLL NIFELNGLPS
301: EENPYLFNGD FVDRGSFSVE IILTLFAFKC MCPSSIYLAR GNHESKSMNK IYGFEGEVRS KLSEKFVDLF AEVFCYLPLA HVINGKVFVV HGGLFSVDGV
401: KLSDIRAIDR FCEPPEEGLM CELLWSDPQP LPGRGPSKRG VGLSFGGDVT KRFLQDNNLD LLVRSHEVKD EGYEVEHDGK LITVFSAPNY CDQMGNKGAF
501: IRFEAPDMKP NIVTFSAVPH PDVKPMAYAN NFLRMFN

Arabidopsis Description

PAPP5Serine/threonine-protein phosphatase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q84XU2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.