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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • nucleus 4
  • plastid 1
  • cytosol 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
ChloroP:plastid
EpiLoc:nucleus
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
extracellular: 29876421
msms PMID: 29876421 doi
L Ceballos-Laita, E Gutierrez-Carbonell, D Takahashi, A Abadía, M Uemura, J Abadía, AF López-Millán
Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan., Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain., United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan., USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates St., Houston, TX 77030, USA.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400007762 Potato cytosol 98.89 98.99
Solyc06g073960.2.1 Tomato extracellular 90.45 90.36
VIT_06s0009g00260.t01 Wine grape cytosol 89.75 88.77
KRH22626 Soybean nucleus 87.24 87.85
Solyc01g009280.2.1 Tomato cytosol 86.73 87.53
KRH25329 Soybean cytosol 88.34 87.46
KRH26699 Soybean cytosol 88.14 87.09
KRG88879 Soybean cytosol 88.54 86.88
Bra034332.1-P Field mustard cytosol 86.83 86.57
AT2G27210.1 Thale cress cytosol 87.44 86.48
CDY57485 Canola cytosol 86.73 86.47
CDY57791 Canola cytosol 86.43 86.26
CDX71467 Canola cytosol 27.74 85.19
CDY06313 Canola cytosol 84.42 84.68
CDY22684 Canola cytosol 84.52 84.52
Bra031626.1-P Field mustard cytosol 84.22 84.48
AT1G08420.1 Thale cress cytosol 86.03 84.09
CDY31148 Canola cytosol 83.42 83.84
CDX97481 Canola cytosol 83.42 83.67
Bra030724.1-P Field mustard cytosol 83.22 83.64
VIT_00s1197g00010.t01 Wine grape cytosol 16.18 82.56
VIT_00s1427g00010.t01 Wine grape cytosol 16.18 82.56
CDX71469 Canola cytosol 33.07 79.47
Solyc09g074320.2.1 Tomato plastid 54.37 64.02
Zm00001d045786_P002 Maize cytosol 11.26 49.78
Zm00001d036998_P002 Maize cytosol 5.63 41.18
Solyc07g055860.2.1 Tomato cytosol 14.17 26.5
Solyc02g082230.2.1 Tomato cytosol, plastid 11.86 25.71
Protein Annotations
KEGG:04658+3.1.3.16KEGG:04660+3.1.3.16MapMan:11.3.2.2MapMan:18.4.24.1.7Gene3D:2.120.10.80Gene3D:3.60.21.10
InterPro:Calcineurin-like_PHP_ApaHGO:GO:0003674GO:GO:0003824GO:GO:0004721GO:GO:0004722GO:GO:0005488
GO:GO:0005515GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0006464
GO:GO:0006470GO:GO:0007154GO:GO:0007165GO:GO:0008150GO:GO:0008152GO:GO:0009719
GO:GO:0009742GO:GO:0009987GO:GO:0016787GO:GO:0019538GO:GO:0046872InterPro:IPR015915
InterPro:IPR029052UniProt:K4DAP9InterPro:Kelch-typ_b-propellerInterPro:Kelch_2InterPro:Metallo-depent_PP-likePFAM:PF00149
PFAM:PF07646PFAM:PF13418PIRSF:PIRSF036363PRINTS:PR00114ScanProsite:PS00125PANTHER:PTHR11668
PANTHER:PTHR11668:SF399SMART:SM00156SUPFAM:SSF117281SUPFAM:SSF56300InterPro:Ser/Thr-sp_prot-phosphataseInterPro:Ser/Thr_prot_Pase_BSU1
EnsemblPlantsGene:Solyc11g071920.1EnsemblPlants:Solyc11g071920.1.1UniParc:UPI000276998ESEG:seg::
Description
Serine/threonine-protein phosphatase [Source:UniProtKB/TrEMBL;Acc:K4DAP9]
Coordinates
chr11:+:55240769..55250182
Molecular Weight (calculated)
106212.0 Da
IEP (calculated)
5.746
GRAVY (calculated)
-0.221
Length
995 amino acids
Sequence
(BLAST)
001: MDVDSTMVSE SDHDPTVQND SSTSEQQLND ESSTSLQQQS SQTQQQQQQS SSSSSVPAVA GPRCAPTYSV VHEVIEKKED GPGPRCGHTL TAVPAVGEEG
101: SPNYIGPRLI LFGGATALEG NSAASGTPSS AGSAGIRLAG ATADVHCYDV FTNKWSRITP IGEPPTPRAA HVATAVGTMV VIQGGIGPAG LSAEDLHVLD
201: LTQQRPRWHR VVVQGPGPGP RYGHVMALVG QRYLMAIGGN DGKRPLADVW ALDTAAKPYE WRKLEPEGEG PPPCMYATAS ARSDGLLLLC GGRDANSVPL
301: ASAYGLAKHR DGRWEWAIAP GVSPSPRYQH AAVFVNARLH VSGGALGGGR MVEDSSSVAV LDTAAGVWCD TKSVVTSPRT GRFSADAAGG DAAVELTRRC
401: RHAAAAVGDL IFIYGGLRGG VLLDDLLVAE DLAAAETTSA ASHAAAAAAN LQDGRLAGRY GFGDERTKQT VSEAVNDGSV VLGNAVAPPV NGDMYTDIST
501: KNVMLQGSRR LSKGVEYLVE ASAAEAEAIT AALAAAKARQ QGNGEVELPD RDGGAEATPS GKAASSSISL DSSGSNNSAP TGVRLHHRAI VVAAETGGAL
601: GGMVRQLSID QFENEGRRVS YGTPENVTAA RKLLDRQMSI NSVPKKLITH LLKPRGWKPP ARREFFLDCN EIADLCDSAE RIFASEPTVL QLRAPIKIFG
701: DLHGQFGDLM RLFDEYGSPS TAGDIAYIDY LFLGDYVDRG QHSLETITLL LALKVEYPYN IHLIRGNHEA SDINALFGFR IECIERLGER DGIWAWHRIN
801: RLFNWLPLAA LIEKKIICMH GGIGRSINHV EQIESIQRPI TMEAGSIVLM DLLWSDPTEN DSVEGLRPNA RGPGLVTFGP DRVMEFCNNN DLQLIVRAHE
901: CVMDGFERFA QGHLITLFSA TNYCGTANNA GAILVLGRDL VVVPKLIHPI PPVSSPENSP ERHIEDTWMQ ELNANRPPTP TRGRPQVAND RVICT
Best Arabidopsis Sequence Match ( AT2G27210.1 )
(BLAST)
0001: MDLDSSMVPE NDQDPIATSE NQSPMEEKEE ASEQQTGSES ESASLTPSLP PPSQQQQQQQ QQPQVTAVVG PRCAPTYSVV NAIIEKKEDG PGPRCGHTLT
0101: AVPAVGEEGT SSYIGPRLIL FGGATALEGN SGGTGTPTSA GSAGIRLAGA TADVHCYDVL SNKWSRLTPY GEPPSPRAAH VATAVGTMVV IQGGIGPAGL
0201: SAEDLHVLDL TQQRPRWHRV VVQGPGPGPR YGHVMALVGQ RYLMAIGGND GKRPLADVWA LDTAAKPYEW RKLEPEGEGP PPCMYATASA RSDGLLLLCG
0301: GRDANSVPLA SAYGLAKHRD GRWEWAIAPG VSPSARYQHA AVFVNARLHV SGGALGGGRM VEDSSSVAVL DTAAGVWCDT KSVVTSPRTG RYSADAAGGD
0401: ASVELTRRCR HAAAAVGDLI FIYGGLRGGV LLDDLLVAED LAAAETTSAA SHAAAAAAAT NTPPGRSPGR YGFSDERTGE LPESAPDAVV LGSPVAPPVN
0501: GDMYTDISTE NAMVPGIRRT SKGVEYLVEA SAAEAEAISA TLAAAKARQV NGEVELPDRD RGAEATPSGK PSLSLIKPDS AVPNSVIPAG VRLHHRAVVV
0601: AAETGGALGG MVRQLSIDQF ENEGRRVSYG TPESATAARK LLDRQMSINS VPKKVVAHLL KPRGWKPPVR RQFFLDCNEI ADLCDSAERI FSSEPTVLQL
0701: KAPIKIFGDL HGQFGDLMRL FDEYGSPSTA GDISYIDYLF LGDYVDRGQH SLETITLLLA LKVEYQHNVH LIRGNHEAAD INALFGFRIE CIERMGERDG
0801: IWVWHRINRL FNWLPLAALI EKKIICMHGG IGRSINHVEQ IENIQRPITM EAGSIVLMDL LWSDPTENDS VEGLRPNARG PGLVTFGPDR VMEFCNNNDL
0901: QLIVRAHECV MDGFERFAQG HLITLFSATN YCGTANNAGA ILVLGRDLVV VPKLIHPLPP AITSPETSPE RHIEDTWMQE LNVNRPPTPT RGRPQNPNDR
1001: GSLAWI
Arabidopsis Description
BSL3Serine/threonine-protein phosphatase BSL3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHS7]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.