Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400034167 | Potato | mitochondrion | 77.54 | 43.79 |
| CDY57485 | Canola | cytosol | 88.65 | 36.77 |
| CDY57791 | Canola | cytosol | 88.16 | 36.61 |
| AT2G27210.1 | Thale cress | cytosol | 87.2 | 35.88 |
| CDY06313 | Canola | cytosol | 83.09 | 34.68 |
| CDY22684 | Canola | cytosol | 83.09 | 34.57 |
| CDY31148 | Canola | cytosol | 81.64 | 34.14 |
| CDX97481 | Canola | cytosol | 81.4 | 33.97 |
| Solyc06g073960.2.1 | Tomato | extracellular | 80.68 | 33.53 |
| PGSC0003DMT400015099 | Potato | cytosol | 80.19 | 33.23 |
| PGSC0003DMT400007762 | Potato | cytosol | 79.71 | 33.2 |
| Solyc11g071920.1.1 | Tomato | extracellular | 79.47 | 33.07 |
| Solyc01g009280.2.1 | Tomato | cytosol | 76.09 | 31.95 |
| CDX90906 | Canola | cytosol | 42.03 | 19.64 |
| CDY17964 | Canola | cytosol | 41.79 | 19.53 |
| CDY62088 | Canola | cytosol | 41.3 | 19.5 |
| CDX97296 | Canola | cytosol | 40.82 | 19.34 |
| CDY29598 | Canola | cytosol | 21.5 | 12.54 |
| CDY50823 | Canola | cytosol | 7.0 | 6.03 |
| CDX79854 | Canola | cytosol | 7.0 | 5.99 |
| CDY47990 | Canola | cytosol | 7.25 | 5.56 |
| CDY14856 | Canola | cytosol, endoplasmic reticulum | 7.25 | 5.21 |
| CDY17966 | Canola | cytosol | 2.42 | 4.46 |
| Zm00001d045786_P002 | Maize | cytosol | 2.42 | 4.44 |
| CDY43305 | Canola | extracellular | 9.18 | 3.4 |
| CDX85736 | Canola | cytosol | 5.07 | 3.37 |
| CDX93646 | Canola | nucleus | 8.94 | 3.32 |
| CDY40129 | Canola | plastid | 5.07 | 3.17 |
| CDY25481 | Canola | cytosol | 1.69 | 3.11 |
| CDX93563 | Canola | endoplasmic reticulum | 1.45 | 3.08 |
| CDY60048 | Canola | cytosol | 1.93 | 1.97 |
| CDX81202 | Canola | cytosol | 1.93 | 1.97 |
| CDY07313 | Canola | cytosol | 1.21 | 1.89 |
| CDX71467 | Canola | cytosol | 0.97 | 1.23 |
| CDY59015 | Canola | cytosol, endoplasmic reticulum | 0.72 | 1.12 |
| Zm00001d036998_P002 | Maize | cytosol | 0.24 | 0.74 |
Protein Annotations
| EnsemblPlants:CDX71469 | EnsemblPlantsGene:GSBRNA2T00148335001 | Gene3D:2.120.10.80 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR015915 | InterPro:Kelch-typ_b-propeller | InterPro:Kelch_2 | PANTHER:PTHR11668 | PANTHER:PTHR11668:SF399 | PFAM:PF07646 |
| ProteinID:CDX71469 | ProteinID:CDX71469.1 | SEG:seg | SUPFAM:SSF117281 | UniParc:UPI0004EEA639 | MapMan:18.4.24.1.7 |
Description
BnaC04g17040D
Coordinates
chrLK031793:-:1154289..1157018
Molecular Weight (calculated)
42876.4 Da
IEP (calculated)
6.603
GRAVY (calculated)
-0.117
Length
414 amino acids
Sequence
(BLAST)
(BLAST)
001: MIIRQFLTQN TLLDSKTFNH DYTLDTLLNS YATASARSDG LLILLCGGRD ANSVPLASAY GLAKHRDGRW EWAIAPGVSP SARFQHAAVF VNARLHVSGG
101: ALGGGRMVED SSSVAVLDTA AGVWCDTKSV VTSPRTGRYS TDAAGGDASL ELTRRCRHAT AAVGDLIFIY GGLRGGLLLD DLLVAEDLAA AETTSAASHA
201: AAAAAATNSS PGRSPGRYGF DERTGEPPES APGAVVLGSP VAPPVNGDMH TDISTENAML PGTRRTSKGV EYLVEASAAE AEAISATLAA AKARQVNGEV
301: EIPDRDRGAE ATPSGNPSSS LIKPDCSVST SVTPAGVRVH HRAVVVAAET GGALGGMVRQ LSIDQFENEG RGVGYGTPEN ATAARKLLDR QQSINSVPKK
401: VASCLLQTFL KKAL
101: ALGGGRMVED SSSVAVLDTA AGVWCDTKSV VTSPRTGRYS TDAAGGDASL ELTRRCRHAT AAVGDLIFIY GGLRGGLLLD DLLVAEDLAA AETTSAASHA
201: AAAAAATNSS PGRSPGRYGF DERTGEPPES APGAVVLGSP VAPPVNGDMH TDISTENAML PGTRRTSKGV EYLVEASAAE AEAISATLAA AKARQVNGEV
301: EIPDRDRGAE ATPSGNPSSS LIKPDCSVST SVTPAGVRVH HRAVVVAAET GGALGGMVRQ LSIDQFENEG RGVGYGTPEN ATAARKLLDR QQSINSVPKK
401: VASCLLQTFL KKAL
0001: MDEDSSMVAD NDQDREFQSL DGGQSPSPME RETPQQMNDQ SPPPEGGSVP TPPPSDPNPA TSQQQAAAVV GQEQQPALVV GPRCAPTYSV VDAMMDKKED
0101: GPGPRCGHTL TAVPAVGDEG TPGYIGPRLV LFGGATALEG NSGGTGTPTS AGSAGIRLAG ATADVHCYDV LSNKWTRLTP FGEPPTPRAA HVATAVGTMV
0201: VIQGGIGPAG LSAEDLHVLD LTQQRPRWHR VVVQGPGPGP RYGHVMALVG QRYLMAIGGN DGKRPLADVW ALDTAAKPYE WRKLEPEGEG PPPCMYATAS
0301: ARSDGLLLLC GGRDANSVPL ASAYGLAKHR DGRWEWAIAP GVSPSSRYQH AAVFVNARLH VSGGALGGGR MVEDSSSVAV LDTAAGVWCD TKSVVTSPRT
0401: GRYSADAAGG DASVELTRRC RHAAAAVGDL IFIYGGLRGG VLLDDLLVAE DLAAAETTYA ASHAAAAAAT NSPPGRLPGR YGFSDERNRE LSESAADGAV
0501: VLGSPVAPPV NGDMHTDISP ENALLPGTRR TNKGVEYLVE ASAAEAEAIS ATLAAAKARQ VNGEVELPDR DCGAEATPSG KPTFSLIKPD SMGSMSVTPA
0601: GIRLHHRAVV VAAETGGALG GMVRQLSIDQ FENEGRRVSY GTPESATAAR KLLDRQMSIN SVPKKVIAHL LKPRGWKPPV RRQFFLDCNE IADLCDSAER
0701: IFASEPTVLQ LKAPIKIFGD LHGQFGDLMR LFDEYGSPST AGDISYIDYL FLGDYVDRGQ HSLETISLLL ALKVEYQHNV HLIRGNHEAA DINALFGFRI
0801: ECIERMGERD GIWVWHRINR LFNWLPLAAS IEKKIICMHG GIGRSINHVE QIENIQRPIT MEAGSIVLMD LLWSDPTEND SVEGLRPNAR GPGLVTFGPD
0901: RVMEFCNNND LQLIVRAHEC VMDGFERFAQ GHLITLFSAT NYCGTANNAG AILVLGRDLV VVPKLIHPLP PALSSPETSP ERHIEDTWMQ ELNANRPATP
1001: TRGRPQNSND RGGSLAWM
0101: GPGPRCGHTL TAVPAVGDEG TPGYIGPRLV LFGGATALEG NSGGTGTPTS AGSAGIRLAG ATADVHCYDV LSNKWTRLTP FGEPPTPRAA HVATAVGTMV
0201: VIQGGIGPAG LSAEDLHVLD LTQQRPRWHR VVVQGPGPGP RYGHVMALVG QRYLMAIGGN DGKRPLADVW ALDTAAKPYE WRKLEPEGEG PPPCMYATAS
0301: ARSDGLLLLC GGRDANSVPL ASAYGLAKHR DGRWEWAIAP GVSPSSRYQH AAVFVNARLH VSGGALGGGR MVEDSSSVAV LDTAAGVWCD TKSVVTSPRT
0401: GRYSADAAGG DASVELTRRC RHAAAAVGDL IFIYGGLRGG VLLDDLLVAE DLAAAETTYA ASHAAAAAAT NSPPGRLPGR YGFSDERNRE LSESAADGAV
0501: VLGSPVAPPV NGDMHTDISP ENALLPGTRR TNKGVEYLVE ASAAEAEAIS ATLAAAKARQ VNGEVELPDR DCGAEATPSG KPTFSLIKPD SMGSMSVTPA
0601: GIRLHHRAVV VAAETGGALG GMVRQLSIDQ FENEGRRVSY GTPESATAAR KLLDRQMSIN SVPKKVIAHL LKPRGWKPPV RRQFFLDCNE IADLCDSAER
0701: IFASEPTVLQ LKAPIKIFGD LHGQFGDLMR LFDEYGSPST AGDISYIDYL FLGDYVDRGQ HSLETISLLL ALKVEYQHNV HLIRGNHEAA DINALFGFRI
0801: ECIERMGERD GIWVWHRINR LFNWLPLAAS IEKKIICMHG GIGRSINHVE QIENIQRPIT MEAGSIVLMD LLWSDPTEND SVEGLRPNAR GPGLVTFGPD
0901: RVMEFCNNND LQLIVRAHEC VMDGFERFAQ GHLITLFSAT NYCGTANNAG AILVLGRDLV VVPKLIHPLP PALSSPETSP ERHIEDTWMQ ELNANRPATP
1001: TRGRPQNSND RGGSLAWM
Arabidopsis Description
BSL2Serine/threonine-protein phosphatase BSL2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJF0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.