CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, cytosol

Predictor Summary:

nucleus 1
plastid 1
cytosol 2
extracellular 2
endoplasmic reticulum 3
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, endoplasmic reticulum
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY47990	Canola	cytosol	93.06	99.26
CDX79854	Canola	cytosol	80.9	96.28
CDY50823	Canola	cytosol	79.69	95.43
AT2G42810.2	Thale cress	cytosol	87.85	94.05
VIT_12s0142g00720.t01	Wine grape	cytosol, golgi, mitochondrion, plastid	36.81	89.08
HORVU3Hr1G026470.1	Barley	cytosol	67.01	83.55
TraesCS3D01G139500.1	Wheat	cytosol	69.27	82.61
TraesCS3A01G139200.1	Wheat	golgi	69.27	82.61
GSMUA_Achr6P05530_001	Banana	cytosol	70.83	82.42
TraesCS3B01G156800.1	Wheat	cytosol	69.1	82.4
EES17868	Sorghum	cytosol	68.06	81.33
KRH46082	Soybean	cytosol	75.69	80.74
KRG98883	Soybean	cytosol	75.35	80.37
Solyc07g055860.2.1	Tomato	cytosol	73.96	80.08
PGSC0003DMT400044699	Potato	cytosol	76.56	79.75
Os05t0204900-01	Rice	cytosol, plasma membrane	66.32	79.09
Bra016856.1-P	Field mustard	endoplasmic reticulum, golgi	95.49	78.24
Zm00001d037734_P011	Maize	endoplasmic reticulum	67.19	75.15
CDY25481	Canola	cytosol	24.31	62.22
CDY59015	Canola	cytosol, endoplasmic reticulum	22.05	47.21
CDX81202	Canola	cytosol	20.31	28.75
CDY60048	Canola	cytosol	20.14	28.5
CDY07313	Canola	cytosol	12.67	27.55
CDX71467	Canola	cytosol	14.24	25.31
CDY17966	Canola	cytosol	8.85	22.77
CDX93563	Canola	endoplasmic reticulum	7.12	21.03
CDX85736	Canola	cytosol	17.36	16.03
CDY29598	Canola	cytosol	18.75	15.21
CDY40129	Canola	plastid	17.19	14.95
CDY17964	Canola	cytosol	22.74	14.79
CDX90906	Canola	cytosol	22.74	14.79
CDY62088	Canola	cytosol	21.18	13.91
CDX97296	Canola	cytosol	21.01	13.84
CDY57791	Canola	cytosol	23.61	13.64
CDY57485	Canola	cytosol	23.61	13.63
CDY06313	Canola	cytosol	23.09	13.41
CDY22684	Canola	cytosol	22.92	13.27
CDY31148	Canola	cytosol	22.74	13.23
CDX97481	Canola	cytosol	22.74	13.21
CDX93646	Canola	nucleus	21.35	11.02
CDY43305	Canola	extracellular	21.18	10.92
CDX71469	Canola	cytosol	5.21	7.25

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	Gene3D:1.25.40.10	MapMan:18.4.24.1.4	Gene3D:3.60.21.10	GO:A0A078FNX0
UniProt:A0A078FNX0	EnsemblPlants:CDY14856	ProteinID:CDY14856	ProteinID:CDY14856.1	InterPro:Calcineurin-like_PHP_ApaH	ncoils:Coil
GO:GO:0003674	GO:GO:0003824	GO:GO:0004721	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016787	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00084743001	InterPro:IPR011990	InterPro:IPR013026
InterPro:IPR019734	InterPro:IPR029052	InterPro:Metallo-depent_PP-like	PFAM:PF00149	PFAM:PF00515	PFAM:PF08321
PFAM:PF13181	PIRSF:PIRSF033096	InterPro:PPP_dom	PRINTS:PR00114	PFscan:PS50005	PFscan:PS50293
PANTHER:PTHR11668	PANTHER:PTHR11668:SF391	SMART:SM00028	SMART:SM00156	SUPFAM:SSF48452	SUPFAM:SSF56300
InterPro:Ser/Thr-sp_prot-phosphatase	InterPro:Ser/Thr_PPase_5	TMHMM:TMhelix	InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf	InterPro:TPR_1
InterPro:TPR_repeat	UniParc:UPI0004EF0445	SEG:seg	:	:	:

Description

BnaC04g48530DBnaC04g48530D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FNX0]

Coordinates

chrLK032047:-:721983..726002

Molecular Weight (calculated)

64871.6 Da

IEP (calculated)

6.570

GRAVY (calculated)

-0.258

Length

576 amino acids

Sequence
(BLAST)

001: MTTEHESSQL YAIQTVLFLS GFVHFLLRHV RQNRDSMETK NENSDVSRAE EMKNQANEAF KGHKFSNAID LYTKAIELNG NNAVYWANRA FAHTKLEEYG
101: SAIQDASKAI EIDPKYSKGY YRRGAAYLAM GKFKDALKDF QQVKRICPND PDAARKLKEC EKAVMKMKFE EAISAPVSER RSVAESIDYH TIGNKPRSSS
201: FLPTKTALAA VVAAVMVVAV RGFATTEILM VLVSVVLGTY WWGSFSGSEV EPQYSGARIE GEEVTLEFVK QMMEDFKNQK TLHKRYAYQI VLKTRQILQA
301: LPSLVDISVP NGKHFTVCGD VHGQFYDLLN IFELNGLPSE ENPYLFNGDF VDRGSFSVEI ILTLFAFKCM SPSSIYLARG NHESKSMNKI YGFEGEVRSK
401: LSEKFVDLFA EVFCYLPLAH VINEKIFVVH GGLFSVDGVK LSDIRAIDRF CEPPEEGLMC ELLWSDPQPL PGRGPSKRGV GLSFGGDVTK RFLEDNNLDL
501: VVRSHEVKDE GYEVDHDGKL ITVFSAPNYC DQMGNKGAFI RFEAPDMKPN IVTFSAVPHP DVKPMAYANN FMRMFN

Best Arabidopsis Sequence Match ( AT2G42810.2 )
(BLAST)

001: METKNENSDV SRAEEFKSQA NEAFKGHKYS SAIDLYTKAI ELNSNNAVYW ANRAFAHTKL EEYGSAIQDA SKAIEVDSRY SKGYYRRGAA YLAMGKFKDA
101: LKDFQQVKRL SPNDPDATRK LKECEKAVMK LKFEEAISVP VSERRSVAES IDFHTIGNKP RSSSMPTKTA LAAVVAAVMV VAVRGFATTE ILMVLVSVVL
201: GTFWWGSFSG KVEPQYSGAR IEGEEVTLDF VKTMMEDFKN QKTLHKRYAY QIVLQTRQIL LALPSLVDIS VPHGKHITVC GDVHGQFYDL LNIFELNGLP
301: SEENPYLFNG DFVDRGSFSV EIILTLFAFK CMCPSSIYLA RGNHESKSMN KIYGFEGEVR SKLSEKFVDL FAEVFCYLPL AHVINGKVFV VHGGLFSVDG
401: VKLSDIRAID RFCEPPEEGL MCELLWSDPQ PLPGRGPSKR GVGLSFGGDV TKRFLQDNNL DLLVRSHEVK DEGYEVEHDG KLITVFSAPN YCDQMGNKGA
501: FIRFEAPDMK PNIVTFSAVP HPDVKPMAYA NNFLRMFN

Arabidopsis Description

PAPP5Serine/threonine-protein phosphatase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q84XU2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.