Factsheet for VIT_12s0142g00720.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, golgi, plastid, cytosol

Predictor Summary:

plastid 3
cytosol 3
golgi 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU3Hr1G026470.1	Barley	cytosol	85.71	44.16
Bra004718.1-P	Field mustard	cytosol	89.08	43.8
CDX79854	Canola	cytosol	89.08	43.8
CDY50823	Canola	cytosol	88.24	43.66
GSMUA_Achr6P05530_001	Banana	cytosol	89.5	43.03
TraesCS3D01G139500.1	Wheat	cytosol	86.55	42.65
TraesCS3A01G139200.1	Wheat	golgi	86.13	42.44
EES17868	Sorghum	cytosol	85.71	42.32
TraesCS3B01G156800.1	Wheat	cytosol	85.71	42.24
Os05t0204900-01	Rice	cytosol, plasma membrane	84.87	41.82
Solyc07g055860.2.1	Tomato	cytosol	92.86	41.54
KRH46082	Soybean	cytosol	92.86	40.93
KRG98883	Soybean	cytosol	92.86	40.93
PGSC0003DMT400044699	Potato	cytosol	92.86	39.96
CDY47990	Canola	cytosol	89.08	39.26
Zm00001d037734_P011	Maize	endoplasmic reticulum	84.87	39.22
AT2G42810.2	Thale cress	cytosol	88.66	39.22
CDY14856	Canola	cytosol, endoplasmic reticulum	89.08	36.81
CDY59015	Canola	cytosol, endoplasmic reticulum	39.08	34.57
CDY25481	Canola	cytosol	31.93	33.78
Bra016856.1-P	Field mustard	endoplasmic reticulum, golgi	89.08	30.16
VIT_15s0046g00910.t01	Wine grape	cytosol	7.56	26.87
VIT_04s0044g01770.t01	Wine grape	cytosol	39.08	22.09
VIT_15s0046g00810.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular	20.17	21.82
Bra006495.1-P	Field mustard	cytosol	58.82	14.6
VIT_13s0073g00490.t01	Wine grape	cytosol, mitochondrion	26.05	11.61
VIT_15s0045g00270.t01	Wine grape	cytosol	14.71	9.23
VIT_07s0104g01030.t01	Wine grape	cytosol	32.35	8.67
VIT_06s0009g00260.t01	Wine grape	cytosol	32.77	7.75
VIT_00s1197g00010.t01	Wine grape	cytosol	1.68	2.05
VIT_00s1427g00010.t01	Wine grape	cytosol	1.68	2.05
VIT_13s0073g00440.t01	Wine grape	plastid	0.42	0.25

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	EntrezGene:100259074	wikigene:100259074	Gene3D:3.60.21.10	MapMan:50.3.1
EMBL:AM448299	ProteinID:CAN72055	ProteinID:CAN72055.1	ProteinID:CCB56413	ProteinID:CCB56413.1	InterPro:Calcineurin-like_PHP_ApaH
UniProt:F6HP07	EMBL:FN595999	GO:GO:0003674	GO:GO:0003824	GO:GO:0004721	GO:GO:0006464
GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538
InterPro:IPR029052	EntrezGene:LOC100259074	wikigene:LOC100259074	InterPro:Metallo-depent_PP-like	PFAM:PF00149	PRINTS:PR00114
PANTHER:PTHR11668	PANTHER:PTHR11668:SF391	SMART:SM00156	SUPFAM:SSF56300	InterPro:Ser/Thr-sp_prot-phosphatase	InterPro:Ser/Thr_PPase_5
TIGR:TC65145	UniParc:UPI000210827F	ArrayExpress:VIT_12s0142g00720	EnsemblPlantsGene:VIT_12s0142g00720	EnsemblPlants:VIT_12s0142g00720.t01	unigene:Vvi.6044
RefSeq:XP_002280111	RefSeq:XP_002280111.2	:	:	:	:

Description

No Description!

Coordinates

chr12:-:639526..644730

Molecular Weight (calculated)

26825.4 Da

IEP (calculated)

6.394

GRAVY (calculated)

-0.150

Length

238 amino acids

Sequence
(BLAST)

001: MHQQPTLQRD PIKLRGSFSL EVILTLFAFK CMSPSAIYLS RGNHESKSMN KIYGFEGEVR SKLSETFVEL FAEVFCCLPL AHVINEKIFV VHGGLFSVDG
101: VKLSDIRAID RFCEPPEEGL MCELLWSDPQ PYPGRGPSKR GVGLSFGVDV TKRFLQENNL DLVVRSHEVK DEGYEIEHDG KLITVFSAPN YCDQMGNKGA
201: FIRFEAPDLK PNIVTFSAVP HPDVKPMAYA NNFLRMFS

Best Arabidopsis Sequence Match ( AT2G42810.2 )
(BLAST)

001: METKNENSDV SRAEEFKSQA NEAFKGHKYS SAIDLYTKAI ELNSNNAVYW ANRAFAHTKL EEYGSAIQDA SKAIEVDSRY SKGYYRRGAA YLAMGKFKDA
101: LKDFQQVKRL SPNDPDATRK LKECEKAVMK LKFEEAISVP VSERRSVAES IDFHTIGNKP RSSSMPTKTA LAAVVAAVMV VAVRGFATTE ILMVLVSVVL
201: GTFWWGSFSG KVEPQYSGAR IEGEEVTLDF VKTMMEDFKN QKTLHKRYAY QIVLQTRQIL LALPSLVDIS VPHGKHITVC GDVHGQFYDL LNIFELNGLP
301: SEENPYLFNG DFVDRGSFSV EIILTLFAFK CMCPSSIYLA RGNHESKSMN KIYGFEGEVR SKLSEKFVDL FAEVFCYLPL AHVINGKVFV VHGGLFSVDG
401: VKLSDIRAID RFCEPPEEGL MCELLWSDPQ PLPGRGPSKR GVGLSFGGDV TKRFLQDNNL DLLVRSHEVK DEGYEVEHDG KLITVFSAPN YCDQMGNKGA
501: FIRFEAPDMK PNIVTFSAVP HPDVKPMAYA NNFLRMFN

Arabidopsis Description

PAPP5Serine/threonine-protein phosphatase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q84XU2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.