Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- cytosol 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400077846 | Potato | cytosol | 45.48 | 69.08 |
| VIT_06s0009g00260.t01 | Wine grape | cytosol | 77.89 | 30.82 |
| VIT_00s1197g00010.t01 | Wine grape | cytosol | 14.82 | 30.26 |
| VIT_00s1427g00010.t01 | Wine grape | cytosol | 14.82 | 30.26 |
| VIT_07s0104g01030.t01 | Wine grape | cytosol | 53.52 | 23.99 |
| VIT_13s0073g00490.t01 | Wine grape | cytosol, mitochondrion | 4.27 | 3.18 |
| VIT_15s0046g00810.t01 | Wine grape | cytosol, endoplasmic reticulum, extracellular | 0.25 | 0.45 |
| VIT_12s0142g00720.t01 | Wine grape | cytosol, golgi, mitochondrion, plastid | 0.25 | 0.42 |
| VIT_15s0045g00270.t01 | Wine grape | cytosol | 0.25 | 0.26 |
| VIT_04s0044g01770.t01 | Wine grape | cytosol | 0.0 | 0.0 |
| VIT_15s0046g00910.t01 | Wine grape | cytosol | 0.0 | 0.0 |
Protein Annotations
| EntrezGene:100245661 | wikigene:100245661 | MapMan:11.3.2.2 | MapMan:18.4.24.1.7 | Gene3D:2.120.10.80 | ProteinID:CCB49565 |
| ProteinID:CCB49565.1 | UniProt:F6HBH5 | EMBL:FN595510 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR015915 | InterPro:Kelch-typ_b-propeller | EntrezGene:LOC100245661 | wikigene:LOC100245661 | PFAM:PF13415 | PFAM:PF13418 |
| PANTHER:PTHR23244 | PANTHER:PTHR23244:SF396 | SUPFAM:SSF117281 | UniParc:UPI0002108449 | ArrayExpress:VIT_13s0073g00440 | EnsemblPlantsGene:VIT_13s0073g00440 |
| EnsemblPlants:VIT_13s0073g00440.t01 | RefSeq:XP_002262846 | RefSeq:XP_002262846.2 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr13:+:14246333..14276827
Molecular Weight (calculated)
41573.3 Da
IEP (calculated)
8.571
GRAVY (calculated)
-0.159
Length
398 amino acids
Sequence
(BLAST)
(BLAST)
001: MEVNSSVTPE NDSASGGLHH LTSTSIPRRS PHQSPIRPGL VPTYFPVNTI IEKKEDNPGP RCGHTLTAVA AVGEEGSPGY IGPRLILFGG ATALENNATT
101: SGALSSPGSS SIRLAGATAD VHCYDISSKK WSRITPLGEP PTPRAAHVAA AVGTMVVIQG GIGPAGLSSE DLHALDLTQQ QPRWHKVAVQ GSGPGPRYGH
201: VMALVEQRFL MAIGGNDGKR PLADVWALDT SAKPYKWLKL EPEGEGPPPC MYATASARSD GLLLLFGGRD ANSVPLASAY GLARDRDGHW AWAIALGVSP
301: SPRYQHAAVF VHAQLHVSGG ALGGGRMVED RSSIAVLDTA AGVWCDTKAI VTSARAGRYS ANATGGDTSF ELIRRCRHAA AAVGDLVYVY GGLRCGKK
101: SGALSSPGSS SIRLAGATAD VHCYDISSKK WSRITPLGEP PTPRAAHVAA AVGTMVVIQG GIGPAGLSSE DLHALDLTQQ QPRWHKVAVQ GSGPGPRYGH
201: VMALVEQRFL MAIGGNDGKR PLADVWALDT SAKPYKWLKL EPEGEGPPPC MYATASARSD GLLLLFGGRD ANSVPLASAY GLARDRDGHW AWAIALGVSP
301: SPRYQHAAVF VHAQLHVSGG ALGGGRMVED RSSIAVLDTA AGVWCDTKAI VTSARAGRYS ANATGGDTSF ELIRRCRHAA AAVGDLVYVY GGLRCGKK
0001: MDLDSSMVPE NDQDPIATSE NQSPMEEKEE ASEQQTGSES ESASLTPSLP PPSQQQQQQQ QQPQVTAVVG PRCAPTYSVV NAIIEKKEDG PGPRCGHTLT
0101: AVPAVGEEGT SSYIGPRLIL FGGATALEGN SGGTGTPTSA GSAGIRLAGA TADVHCYDVL SNKWSRLTPY GEPPSPRAAH VATAVGTMVV IQGGIGPAGL
0201: SAEDLHVLDL TQQRPRWHRV VVQGPGPGPR YGHVMALVGQ RYLMAIGGND GKRPLADVWA LDTAAKPYEW RKLEPEGEGP PPCMYATASA RSDGLLLLCG
0301: GRDANSVPLA SAYGLAKHRD GRWEWAIAPG VSPSARYQHA AVFVNARLHV SGGALGGGRM VEDSSSVAVL DTAAGVWCDT KSVVTSPRTG RYSADAAGGD
0401: ASVELTRRCR HAAAAVGDLI FIYGGLRGGV LLDDLLVAED LAAAETTSAA SHAAAAAAAT NTPPGRSPGR YGFSDERTGE LPESAPDAVV LGSPVAPPVN
0501: GDMYTDISTE NAMVPGIRRT SKGVEYLVEA SAAEAEAISA TLAAAKARQV NGEVELPDRD RGAEATPSGK PSLSLIKPDS AVPNSVIPAG VRLHHRAVVV
0601: AAETGGALGG MVRQLSIDQF ENEGRRVSYG TPESATAARK LLDRQMSINS VPKKVVAHLL KPRGWKPPVR RQFFLDCNEI ADLCDSAERI FSSEPTVLQL
0701: KAPIKIFGDL HGQFGDLMRL FDEYGSPSTA GDISYIDYLF LGDYVDRGQH SLETITLLLA LKVEYQHNVH LIRGNHEAAD INALFGFRIE CIERMGERDG
0801: IWVWHRINRL FNWLPLAALI EKKIICMHGG IGRSINHVEQ IENIQRPITM EAGSIVLMDL LWSDPTENDS VEGLRPNARG PGLVTFGPDR VMEFCNNNDL
0901: QLIVRAHECV MDGFERFAQG HLITLFSATN YCGTANNAGA ILVLGRDLVV VPKLIHPLPP AITSPETSPE RHIEDTWMQE LNVNRPPTPT RGRPQNPNDR
1001: GSLAWI
0101: AVPAVGEEGT SSYIGPRLIL FGGATALEGN SGGTGTPTSA GSAGIRLAGA TADVHCYDVL SNKWSRLTPY GEPPSPRAAH VATAVGTMVV IQGGIGPAGL
0201: SAEDLHVLDL TQQRPRWHRV VVQGPGPGPR YGHVMALVGQ RYLMAIGGND GKRPLADVWA LDTAAKPYEW RKLEPEGEGP PPCMYATASA RSDGLLLLCG
0301: GRDANSVPLA SAYGLAKHRD GRWEWAIAPG VSPSARYQHA AVFVNARLHV SGGALGGGRM VEDSSSVAVL DTAAGVWCDT KSVVTSPRTG RYSADAAGGD
0401: ASVELTRRCR HAAAAVGDLI FIYGGLRGGV LLDDLLVAED LAAAETTSAA SHAAAAAAAT NTPPGRSPGR YGFSDERTGE LPESAPDAVV LGSPVAPPVN
0501: GDMYTDISTE NAMVPGIRRT SKGVEYLVEA SAAEAEAISA TLAAAKARQV NGEVELPDRD RGAEATPSGK PSLSLIKPDS AVPNSVIPAG VRLHHRAVVV
0601: AAETGGALGG MVRQLSIDQF ENEGRRVSYG TPESATAARK LLDRQMSINS VPKKVVAHLL KPRGWKPPVR RQFFLDCNEI ADLCDSAERI FSSEPTVLQL
0701: KAPIKIFGDL HGQFGDLMRL FDEYGSPSTA GDISYIDYLF LGDYVDRGQH SLETITLLLA LKVEYQHNVH LIRGNHEAAD INALFGFRIE CIERMGERDG
0801: IWVWHRINRL FNWLPLAALI EKKIICMHGG IGRSINHVEQ IENIQRPITM EAGSIVLMDL LWSDPTENDS VEGLRPNARG PGLVTFGPDR VMEFCNNNDL
0901: QLIVRAHECV MDGFERFAQG HLITLFSATN YCGTANNAGA ILVLGRDLVV VPKLIHPLPP AITSPETSPE RHIEDTWMQE LNVNRPPTPT RGRPQNPNDR
1001: GSLAWI
Arabidopsis Description
BSL3Serine/threonine-protein phosphatase BSL3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHS7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.