Factsheet for VIT_04s0044g01770.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra037756.1-P	Field mustard	cytosol	73.63	76.17
CDX81202	Canola	cytosol	73.63	76.17
CDY60048	Canola	cytosol	73.63	76.17
AT5G63870.1	Thale cress	cytosol	73.16	74.58
GSMUA_Achr3P03680_001	Banana	cytosol	69.83	69.5
Solyc02g082230.2.1	Tomato	cytosol, plastid	73.87	67.76
PGSC0003DMT400035531	Potato	cytosol, plastid	73.87	67.76
KRH39390	Soybean	cytosol, plastid	73.4	67.32
OQU80907	Sorghum	cytosol	64.37	67.08
KRH07839	Soybean	cytosol	72.92	66.88
Zm00001d031486_P001	Maize	cytosol	65.56	62.3
Bra024243.1-P	Field mustard	cytosol, plastid	26.6	62.22
Os08t0513000-01	Rice	cytosol	25.18	60.23
PGSC0003DMT400020399	Potato	cytosol	48.69	59.77
TraesCS7B01G142300.1	Wheat	cytosol	62.95	58.5
TraesCS7A01G249000.1	Wheat	cytosol	62.71	58.28
HORVU7Hr1G051280.1	Barley	cytosol	63.18	52.57
VIT_12s0142g00720.t01	Wine grape	cytosol, golgi, mitochondrion, plastid	22.09	39.08
VIT_15s0046g00910.t01	Wine grape	cytosol	3.8	23.88
VIT_15s0046g00810.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular	10.93	20.91
VIT_13s0073g00490.t01	Wine grape	cytosol, mitochondrion	22.8	17.98
VIT_15s0045g00270.t01	Wine grape	cytosol	11.88	13.19
VIT_07s0104g01030.t01	Wine grape	cytosol	27.79	13.18
VIT_06s0009g00260.t01	Wine grape	cytosol	27.32	11.43
VIT_00s1197g00010.t01	Wine grape	cytosol	0.95	2.05
VIT_00s1427g00010.t01	Wine grape	cytosol	0.95	2.05
VIT_13s0073g00440.t01	Wine grape	plastid	0.0	0.0

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	EntrezGene:100251768	wikigene:100251768	MapMan:18.4.24.1.6	Gene3D:3.60.21.10
ProteinID:CCB60385	ProteinID:CCB60385.1	InterPro:Calcineurin-like_PHP_ApaH	UniProt:F6I0B9	EMBL:FN596506	GO:GO:0003674
GO:GO:0003824	GO:GO:0004721	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	InterPro:IPR029052	EntrezGene:LOC100251768	wikigene:LOC100251768
InterPro:Metallo-depent_PP-like	PFAM:PF00149	PRINTS:PR00114	ScanProsite:PS00125	PANTHER:PTHR11668	PANTHER:PTHR11668:SF241
SMART:SM00156	SUPFAM:SSF56300	InterPro:Ser/Thr-sp_prot-phosphatase	UniParc:UPI00015CC6BD	ArrayExpress:VIT_04s0044g01770	EnsemblPlantsGene:VIT_04s0044g01770
EnsemblPlants:VIT_04s0044g01770.t01	unigene:Vvi.18039	RefSeq:XP_002263740	RefSeq:XP_002263740.1	SEG:seg	:

Description

Serine/threonine-protein phosphatase [Source:UniProtKB/TrEMBL;Acc:F6I0B9]

Coordinates

chr4:+:23610732..23617964

Molecular Weight (calculated)

47397.4 Da

IEP (calculated)

5.451

GRAVY (calculated)

-0.296

Length

421 amino acids

Sequence
(BLAST)

001: MSDAEIPEAV TWPTNGSLTL EWVDHLMTAF EWCSGNLPPT DFPSLMPVAV FDSLVLTASK ILHKEANCVR IDPSPLDSTV VVVGDVHGQL HDVIFLLRDS
101: GFPSQNRFYV FNGDYVDRGA WGLETFLLLL AWKVFMPDRV FLLRGNHESK YCTSVYGFEK EVMTKYGDKG KHVYRKCLGC FEGLPLASII AERVYTAHGG
201: LFRSVAVNLP KRSKGKKNRR ISFNPEMKSL SLGSLEELSK ARRSVLDPPW EGLNLIPGDV LWSDPSMSPG LSPNKERGIG LLWGPDCTED FLKKLHLKLI
301: IRSHEGPDAR EKRPGLAGMK EGYTIDHVVE SGKLITLFSA PDYPQFQATE ERYQNKGAYI VLEPPDFDNP VFHTFEAITP RPKVNPYYDY EDVIDSDEEL
401: DFSRNDVHSA DEGQSVPVFH I

Best Arabidopsis Sequence Match ( AT5G63870.1 )
(BLAST)

001: METVPPSPIT WPDGGALTND WVHGLMSCFE WSSWNLPPSQ LPSLLPVNVF DSLVLTAHKI LHKERNCVHI DDLDSVSNVV VVGDIHGQLH DLLFLLKDTG
101: FPCQNRCYVF NGDYVDRGAW GLETFLVLLS WKVLMPDRVY LLRGNHESKY CTSMYGFEKE VLTKYGDKGK HVYRKCLGCF EGLPLASIIS GRVYTAHGGL
201: FRSPVLPKRT TRGKKNRRVV LLEPEPSSMK LGTLDELMQA RRSVLDPPWE GSNLIPGDVL WSDPSMTPGL SPNEQRGIGL LWGPDCTEDF LKKYELKLII
301: RSHEGPDARE KRTGLGGMDN GYTIDHNVES GKLITIFSAP DYPQFQATEE RYKNKGAYII LQAPDFSDPQ FHSFEAVKPR PKAHPYYDFE NVIDSDDEMD
401: KSAMDTNNEQ PNS

Arabidopsis Description

PP7Serine/threonine-protein phosphatase 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9FN02]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.