Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 1
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_15s0046g00810.t01 | Wine grape | cytosol, endoplasmic reticulum, extracellular | 98.51 | 30.0 |
| KRH49745 | Soybean | cytosol | 31.34 | 11.54 |
| VIT_12s0142g00720.t01 | Wine grape | cytosol, golgi, mitochondrion, plastid | 26.87 | 7.56 |
| VIT_04s0044g01770.t01 | Wine grape | cytosol | 23.88 | 3.8 |
| VIT_15s0045g00270.t01 | Wine grape | cytosol | 16.42 | 2.9 |
| VIT_07s0104g01030.t01 | Wine grape | cytosol | 34.33 | 2.59 |
| VIT_13s0073g00490.t01 | Wine grape | cytosol, mitochondrion | 17.91 | 2.25 |
| VIT_06s0009g00260.t01 | Wine grape | cytosol | 32.84 | 2.19 |
| VIT_00s1197g00010.t01 | Wine grape | cytosol | 1.49 | 0.51 |
| VIT_00s1427g00010.t01 | Wine grape | cytosol | 1.49 | 0.51 |
| VIT_13s0073g00440.t01 | Wine grape | plastid | 0.0 | 0.0 |
Protein Annotations
| ArrayExpress:VIT_15s0046g00910 | EMBL:FN596755 | EnsemblPlants:VIT_15s0046g00910.t01 | EnsemblPlantsGene:VIT_15s0046g00910 | Gene3D:3.60.21.10 | InterPro:IPR029052 |
| InterPro:Metallo-depent_PP-like | PANTHER:PTHR11668 | PANTHER:PTHR11668:SF405 | ProteinID:CBI40515 | ProteinID:CBI40515.3 | SUPFAM:SSF56300 |
| UniParc:UPI0001BE5607 | UniProt:D7UCQ0 | MapMan:50.3.1 | : | : | : |
Description
No Description!
Coordinates
chr15:-:17979747..17980244
Molecular Weight (calculated)
7759.3 Da
IEP (calculated)
6.499
GRAVY (calculated)
-0.106
Length
67 amino acids
Sequence
(BLAST)
(BLAST)
1: MNDRGVSRTF GPDKVSGSLK KHDMDLICHL HQVVGDGDEF FADKHLVTIF SHLSELLNFY YCHFLYL
001: MAQQGQGSMD PAALDDIIRR LLDYRNPKPG TKQAMLNESE IRQLCIVSRE IFLQQPNLLE LEAPIKICGD IHGQYSDLLR LFEYGGFPPT ANYLFLGDYV
101: DRGKQSLETI CLLLAYKIKY PENFFLLRGN HECASINRIY GFYDECKRRF SVRLWKVFTD SFNCLPVAAV IDDKILCMHG GLSPDLTNVE QIKNIKRPTD
201: VPDSGLLCDL LWSDPSKDVK GWGMNDRGVS YTFGPDKVAE FLIKNDMDLI CRAHQVVEDG YEFFADRQLV TIFSAPNYCG EFDNAGAMMS VDESLMCSFQ
301: ILKPADRKPR FL
101: DRGKQSLETI CLLLAYKIKY PENFFLLRGN HECASINRIY GFYDECKRRF SVRLWKVFTD SFNCLPVAAV IDDKILCMHG GLSPDLTNVE QIKNIKRPTD
201: VPDSGLLCDL LWSDPSKDVK GWGMNDRGVS YTFGPDKVAE FLIKNDMDLI CRAHQVVEDG YEFFADRQLV TIFSAPNYCG EFDNAGAMMS VDESLMCSFQ
301: ILKPADRKPR FL
Arabidopsis Description
TOPP2Serine/threonine-protein phosphatase [Source:UniProtKB/TrEMBL;Acc:A0A178UGI0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.