Factsheet for VIT_15s0046g00810.t01

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular, cytosol

Predictor Summary:

nucleus 1
vacuole 2
plastid 1
cytosol 2
extracellular 2
endoplasmic reticulum 2
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, endoplasmic reticulum, extracellular
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	vacuole
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	secretory
WoLF PSORT:	extracellular
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_15s0046g00910.t01	Wine grape	cytosol	30.0	98.51
KRH49745	Soybean	cytosol	33.18	40.11
VIT_12s0142g00720.t01	Wine grape	cytosol, golgi, mitochondrion, plastid	21.82	20.17
VIT_04s0044g01770.t01	Wine grape	cytosol	20.91	10.93
VIT_13s0073g00490.t01	Wine grape	cytosol, mitochondrion	22.27	9.18
VIT_15s0045g00270.t01	Wine grape	cytosol	13.64	7.92
VIT_07s0104g01030.t01	Wine grape	cytosol	29.55	7.32
VIT_06s0009g00260.t01	Wine grape	cytosol	28.18	6.16
VIT_00s1197g00010.t01	Wine grape	cytosol	1.82	2.05
VIT_00s1427g00010.t01	Wine grape	cytosol	1.82	2.05
VIT_13s0073g00440.t01	Wine grape	plastid	0.45	0.25

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	Gene3D:3.60.21.10	MapMan:50.3.1	ProteinID:CCB62522	ProteinID:CCB62522.1
InterPro:Calcineurin-like_PHP_ApaH	UniProt:F6I6C6	EMBL:FN596755	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	InterPro:IPR029052	InterPro:Metallo-depent_PP-like	PFAM:PF00149
PRINTS:PR00114	PANTHER:PTHR11668	PANTHER:PTHR11668:SF405	SMART:SM00156	SUPFAM:SSF56300	InterPro:Ser/Thr-sp_prot-phosphatase
TMHMM:TMhelix	UniParc:UPI0002109C13	ArrayExpress:VIT_15s0046g00810	EnsemblPlantsGene:VIT_15s0046g00810	EnsemblPlants:VIT_15s0046g00810.t01	SEG:seg

Description

No Description!

Coordinates

chr15:-:17800046..17802179

Molecular Weight (calculated)

25363.1 Da

IEP (calculated)

7.936

GRAVY (calculated)

0.220

Length

220 amino acids

Sequence
(BLAST)

001: MNCTATIGTA SGDTLLLLVK HAELIINKVT EFAASLFFLR FKSFWCHFSF SFCLFSFLCH LKLIKIMLLE VKNLFSHYTY LLLWKPSYYT DCFNCLLVAA
101: LIDKILCMHG GLSPELTNLD QIRKFSRPTD VPDSSLLCDL LWPRPGRDSK GWRMNDRGVS RTFGPDKVSG SLKKHDMDLI CHLHQVVGDG DEFFADKHLV
201: TIFSHLSQLL NFYYCHFLYL

Best Arabidopsis Sequence Match ( AT2G39840.1 )
(BLAST)

001: MATTTTTQGQ QTAIDSAVLD DIIRRLTEVR LARPGKQVQL SEAEIKQLCT TARDIFLQQP NLLELEAPIK ICGDIHGQYS DLLRLFEYGG FPPSANYLFL
101: GDYVDRGKQS LETICLLLAY KIKYPGNFFL LRGNHECASI NRIYGFYDEC KRRFNVRVWK VFTDCFNCLP VAALIDDKIL CMHGGLSPDL DHLDEIRNLP
201: RPTMIPDTGL LCDLLWSDPG KDVKGWGMND RGVSYTFGPD KVSEFLTKHD LDLVCRAHQV VEDGYEFFAD RQLVTVFSAP NYCGEFDNAG AMMSVDENLM
301: CSFQILKPAE KKTKFMMSTK I

Arabidopsis Description

TOPP4Serine/threonine-protein phosphatase [Source:UniProtKB/TrEMBL;Acc:A0A178VUA1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.