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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, cytosol

Predictor Summary:
  • extracellular 4
  • endoplasmic reticulum 5
  • vacuole 4
  • plasma membrane 4
  • golgi 4
  • cytosol 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
VIT_12s0142g00720.t01 Wine grape cytosol, golgi, mitochondrion, plastid 34.57 39.08
CDY25481 Canola cytosol 28.25 33.78
HORVU3Hr1G026470.1 Barley cytosol 44.61 25.97
CDY50823 Canola cytosol 46.1 25.78
CDX79854 Canola cytosol 46.1 25.62
GSMUA_Achr6P05530_001 Banana cytosol 46.47 25.25
TraesCS3D01G139500.1 Wheat cytosol 44.61 24.84
TraesCS3B01G156800.1 Wheat cytosol 44.61 24.84
TraesCS3A01G139200.1 Wheat golgi 44.61 24.84
EES17868 Sorghum cytosol 44.24 24.69
Os05t0204900-01 Rice cytosol, plasma membrane 43.49 24.22
KRH46082 Soybean cytosol 47.58 23.7
Solyc07g055860.2.1 Tomato cytosol 46.84 23.68
CDY47990 Canola cytosol 47.21 23.52
KRG98883 Soybean cytosol 46.84 23.33
Zm00001d037734_P011 Maize endoplasmic reticulum 44.24 23.11
PGSC0003DMT400044699 Potato cytosol 46.84 22.78
CDY14856 Canola cytosol, endoplasmic reticulum 47.21 22.05
CDX71467 Canola cytosol 26.39 21.91
Bra006495.1-P Field mustard cytosol 68.4 19.19
CDX81202 Canola cytosol 29.0 19.16
CDY60048 Canola cytosol 29.0 19.16
CDX93563 Canola endoplasmic reticulum 12.64 17.44
CDY07313 Canola cytosol 16.73 16.98
CDY17966 Canola cytosol 11.52 13.84
CDX85736 Canola cytosol 26.77 11.54
CDY40129 Canola plastid 26.39 10.73
CDY29598 Canola cytosol 23.05 8.73
CDX90906 Canola cytosol 28.62 8.69
CDY17964 Canola cytosol 28.62 8.69
CDY31148 Canola cytosol 28.62 7.78
CDX97481 Canola cytosol 28.62 7.76
CDY57791 Canola cytosol 28.62 7.72
CDY57485 Canola cytosol 28.62 7.72
CDY06313 Canola cytosol 27.88 7.56
CDY22684 Canola cytosol 27.88 7.54
CDY62088 Canola cytosol 23.79 7.3
CDX97296 Canola cytosol 23.42 7.21
CDX93646 Canola nucleus 26.77 6.45
CDY43305 Canola extracellular 26.39 6.36
CDX71469 Canola cytosol 1.12 0.72
Protein Annotations
KEGG:04658+3.1.3.16KEGG:04660+3.1.3.16MapMan:18.4.24.1.4Gene3D:3.60.21.10GO:A0A078J4T6UniProt:A0A078J4T6
EnsemblPlants:CDY59015ProteinID:CDY59015ProteinID:CDY59015.1InterPro:Calcineurin-like_PHP_ApaHGO:GO:0003674GO:GO:0003824
GO:GO:0004721GO:GO:0006464GO:GO:0006470GO:GO:0008150GO:GO:0008152GO:GO:0009987
GO:GO:0016787GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00025450001InterPro:IPR029052InterPro:Metallo-depent_PP-likePFAM:PF00149
PRINTS:PR00114PANTHER:PTHR11668PANTHER:PTHR11668:SF391SMART:SM00156SUPFAM:SSF56300InterPro:Ser/Thr-sp_prot-phosphatase
InterPro:Ser/Thr_PPase_5UniParc:UPI0004EEF62F::::
Description
BnaCnng34050DBnaCnng34050D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J4T6]
Coordinates
chrLK033718:+:20388..22043
Molecular Weight (calculated)
30446.5 Da
IEP (calculated)
7.607
GRAVY (calculated)
-0.164
Length
269 amino acids
Sequence
(BLAST)
001: MLIYELAFSC KPLTFWSLCQ TLVDIHVDNG QCVIVCGDIH GQFYDLCNIF DKKGFPSQDK QYLFNSDFVD RGSFSVETIF TLFALKCACP LWIHLARGNH
101: ESRSLNKKEV LAKLNETVMD MFSDTFCCLP LAHALNRKII VLHGGLFSRD GVTLSDIKSI QRFCQPPKRG LMRDLLWSDP QDSPGRSEST RGEGIIFFGE
201: DVTVIFERQQ SRSFVNSSLC SQHLTTATGR ITNESSSFSK LHKWSQIFRR SQLCDTRTGC GSNGLLQTE
Best Arabidopsis Sequence Match ( AT2G42810.1 )
(BLAST)
001: METKNENSDV SRAEEFKSQA NEAFKGHKYS SAIDLYTKAI ELNSNNAVYW ANRAFAHTKL EEYGSAIQDA SKAIEVDSRY SKGYYRRGAA YLAMGKFKDA
101: LKDFQQVKRL SPNDPDATRK LKECEKAVMK LKFEEAISVP VSERRSVAES IDFHTIEVEP QYSGARIEGE EVTLDFVKTM MEDFKNQKTL HKRYAYQIVL
201: QTRQILLALP SLVDISVPHG KHITVCGDVH GQFYDLLNIF ELNGLPSEEN PYLFNGDFVD RGSFSVEIIL TLFAFKCMCP SSIYLARGNH ESKSMNKIYG
301: FEGEVRSKLS EKFVDLFAEV FCYLPLAHVI NGKVFVVHGG LFSVDGVKLS DIRAIDRFCE PPEEGLMCEL LWSDPQPLPG RGPSKRGVGL SFGGDVTKRF
401: LQDNNLDLLV RSHEVKDEGY EVEHDGKLIT VFSAPNYCDQ MGNKGAFIRF EAPDMKPNIV TFSAVPHPDV KPMAYANNFL RMFN
Arabidopsis Description
PAPP5Serine/threonine-protein phosphatase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q84XU2]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.