CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX79854	Canola	cytosol	85.93	95.87
CDY50823	Canola	cytosol	84.63	95.01
AT2G42810.2	Thale cress	cytosol	93.33	93.68
CDY14856	Canola	cytosol, endoplasmic reticulum	99.26	93.06
VIT_12s0142g00720.t01	Wine grape	cytosol, golgi, mitochondrion, plastid	39.26	89.08
HORVU3Hr1G026470.1	Barley	cytosol	70.93	82.9
GSMUA_Achr6P05530_001	Banana	cytosol	75.19	82.02
TraesCS3D01G139500.1	Wheat	cytosol	73.33	81.99
TraesCS3A01G139200.1	Wheat	golgi	73.33	81.99
TraesCS3B01G156800.1	Wheat	cytosol	73.15	81.78
EES17868	Sorghum	cytosol	72.41	81.12
KRH46082	Soybean	cytosol	80.37	80.37
KRG98883	Soybean	cytosol	80.0	80.0
Solyc07g055860.2.1	Tomato	cytosol	78.7	79.89
PGSC0003DMT400044699	Potato	cytosol	81.67	79.75
Os05t0204900-01	Rice	cytosol, plasma membrane	70.56	78.88
Bra016856.1-P	Field mustard	endoplasmic reticulum, golgi	98.7	75.82
Zm00001d037734_P011	Maize	endoplasmic reticulum	71.48	74.95
CDY25481	Canola	cytosol	25.74	61.78
CDY59015	Canola	cytosol, endoplasmic reticulum	23.52	47.21
CDX81202	Canola	cytosol	21.48	28.5
CDY60048	Canola	cytosol	21.3	28.26
CDY07313	Canola	cytosol	13.52	27.55
CDX71467	Canola	cytosol	15.19	25.31
CDY17966	Canola	cytosol	9.44	22.77
CDX93563	Canola	endoplasmic reticulum	7.59	21.03
CDX85736	Canola	cytosol	18.33	15.87
CDY29598	Canola	cytosol	19.81	15.07
CDY40129	Canola	plastid	17.96	14.65
CDY17964	Canola	cytosol	23.89	14.56
CDX90906	Canola	cytosol	23.89	14.56
CDY62088	Canola	cytosol	22.04	13.57
CDX97296	Canola	cytosol	21.85	13.5
CDY57791	Canola	cytosol	24.63	13.34
CDY57485	Canola	cytosol	24.63	13.33
CDY06313	Canola	cytosol	24.07	13.1
CDY22684	Canola	cytosol	24.07	13.07
CDY31148	Canola	cytosol	23.89	13.03
CDX97481	Canola	cytosol	23.89	13.0
CDX93646	Canola	nucleus	22.59	10.93
CDY43305	Canola	extracellular	22.41	10.83
CDX71469	Canola	cytosol	5.56	7.25

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	Gene3D:1.25.40.10	MapMan:18.4.24.1.4	Gene3D:3.60.21.10	GO:A0A078IAT0
UniProt:A0A078IAT0	EnsemblPlants:CDY47990	ProteinID:CDY47990	ProteinID:CDY47990.1	InterPro:Calcineurin-like_PHP_ApaH	GO:GO:0003674
GO:GO:0003824	GO:GO:0004721	GO:GO:0005488	GO:GO:0005515	GO:GO:0006464	GO:GO:0006470
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00088619001
InterPro:IPR011990	InterPro:IPR013026	InterPro:IPR019734	InterPro:IPR029052	InterPro:Metallo-depent_PP-like	PFAM:PF00149
PFAM:PF00515	PFAM:PF08321	PFAM:PF13181	PIRSF:PIRSF033096	InterPro:PPP_dom	PRINTS:PR00114
PFscan:PS50005	PFscan:PS50293	PANTHER:PTHR11668	PANTHER:PTHR11668:SF391	SMART:SM00028	SMART:SM00156
SUPFAM:SSF48452	SUPFAM:SSF56300	InterPro:Ser/Thr-sp_prot-phosphatase	InterPro:Ser/Thr_PPase_5	InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf
InterPro:TPR_1	InterPro:TPR_repeat	UniParc:UPI0004EE1895	SEG:seg	:	:

Description

BnaA04g24680DBnaA04g24680D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IAT0]

Coordinates

chrLK032747:-:127364..131294

Molecular Weight (calculated)

60534.4 Da

IEP (calculated)

6.389

GRAVY (calculated)

-0.251

Length

540 amino acids

Sequence
(BLAST)

001: METKNENSDV SRAEEMKNQA NEAFKGHKFS NAIDLYTKAI ELNGNNAVYW ANRAFAHTKL EEYGSAIQDA SKAIEIDPKY SKGYYRRGAA YLAMGKFKDA
101: LKDFQQVKRI CPSDPDAARK LKECEKAVMK LKFEEAISAP VSERRSVAES IDYHTIGNKP RSSSFLPTKT ALAAVVAAVM VVAVRGFATT EILMVLVSVV
201: LGTYWWGSFS GSEVEPQYSG ARIEGEEVTL EFVKQMMDDF KNQKTLHKRY AYQIVLKTRQ ILQALPSLVD ISVPNGKHFT VCGDVHGQFY DLLNIFELNG
301: LPSEENPYLF NGDFVDRGSF SVEIILTLFA IKCMSPSSIY LARGNHESKS MNKIYGFEGE VRSKLSEKFV DLFAEVFCYL PLAHVINEKI FVVHGGLFSV
401: DGVKLSDIRA IDRFCEPPEE GLMCELLWSD PQPLPGRGPS KRGVGLSFGG DVTKRFLEDN NLDLVVRSHE VKDEGYEVDH DGKLITVFSA PNYCDQMGNK
501: GAFIRFEAPD MKPNIVTFSA VPHPDVKPMA YANNFMRMFN

Best Arabidopsis Sequence Match ( AT2G42810.2 )
(BLAST)

001: METKNENSDV SRAEEFKSQA NEAFKGHKYS SAIDLYTKAI ELNSNNAVYW ANRAFAHTKL EEYGSAIQDA SKAIEVDSRY SKGYYRRGAA YLAMGKFKDA
101: LKDFQQVKRL SPNDPDATRK LKECEKAVMK LKFEEAISVP VSERRSVAES IDFHTIGNKP RSSSMPTKTA LAAVVAAVMV VAVRGFATTE ILMVLVSVVL
201: GTFWWGSFSG KVEPQYSGAR IEGEEVTLDF VKTMMEDFKN QKTLHKRYAY QIVLQTRQIL LALPSLVDIS VPHGKHITVC GDVHGQFYDL LNIFELNGLP
301: SEENPYLFNG DFVDRGSFSV EIILTLFAFK CMCPSSIYLA RGNHESKSMN KIYGFEGEVR SKLSEKFVDL FAEVFCYLPL AHVINGKVFV VHGGLFSVDG
401: VKLSDIRAID RFCEPPEEGL MCELLWSDPQ PLPGRGPSKR GVGLSFGGDV TKRFLQDNNL DLLVRSHEVK DEGYEVEHDG KLITVFSAPN YCDQMGNKGA
501: FIRFEAPDMK PNIVTFSAVP HPDVKPMAYA NNFLRMFN

Arabidopsis Description

PAPP5Serine/threonine-protein phosphatase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q84XU2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.