CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

nucleus: 21132161

msms PMID: 21132161 doi

B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick

Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH26699	Soybean	cytosol	98.58	96.72
KRH25329	Soybean	cytosol	93.32	91.74
KRG88879	Soybean	cytosol	93.22	90.83
PGSC0003DMT400034167	Potato	mitochondrion	67.0	90.31
Solyc06g073960.2.1	Tomato	extracellular	89.27	88.55
PGSC0003DMT400015099	Potato	cytosol	88.77	87.79
PGSC0003DMT400007762	Potato	cytosol	88.06	87.53
Solyc11g071920.1.1	Tomato	extracellular	87.85	87.24
AT2G27210.1	Thale cress	cytosol	88.66	87.08
Solyc01g009280.2.1	Tomato	cytosol	86.54	86.71
AT1G08420.1	Thale cress	cytosol	88.26	85.66
KRH30592	Soybean	cytosol, extracellular	5.16	79.69
VIT_00s1427g00010.t01	Wine grape	cytosol	15.28	77.44
VIT_00s1197g00010.t01	Wine grape	cytosol	15.28	77.44
CDX93563	Canola	endoplasmic reticulum	13.46	68.21
Bra018626.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	13.26	67.18
KRH71506	Soybean	cytosol	59.72	66.97
KRH31949	Soybean	nucleus	59.62	66.86
Zm00001d045786_P002	Maize	cytosol	11.13	48.89
Zm00001d036998_P002	Maize	cytosol	5.87	42.65
KRH49745	Soybean	cytosol	5.67	30.77
KRH07839	Soybean	cytosol	12.25	26.36
KRH39390	Soybean	cytosol, plastid	12.15	26.14
KRG98883	Soybean	cytosol	13.97	25.56
KRH46082	Soybean	cytosol	13.77	25.19
KRH10039	Soybean	cytosol, plastid	5.26	22.71
KRH23278	Soybean	nucleus	12.75	18.31

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	EntrezGene:100776048	MapMan:11.3.2.2	MapMan:18.4.24.1.7	Gene3D:2.120.10.80
Gene3D:3.60.21.10	UniProt:A0A0R0H3J2	EMBL:ACUP02008423	InterPro:Calcineurin-like_PHP_ApaH	EnsemblPlantsGene:GLYMA_13G312300	GO:GO:0003674
GO:GO:0003824	GO:GO:0004721	GO:GO:0004722	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006464	GO:GO:0006470	GO:GO:0007154
GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009719	GO:GO:0009742	GO:GO:0009987
GO:GO:0016787	GO:GO:0019538	GO:GO:0046872	InterPro:IPR015915	InterPro:IPR029052	EnsemblPlants:KRH22626
ProteinID:KRH22626	ProteinID:KRH22626.1	InterPro:Kelch-typ_b-propeller	InterPro:Kelch_2	InterPro:Metallo-depent_PP-like	PFAM:PF00149
PFAM:PF07646	PFAM:PF13418	PIRSF:PIRSF036363	PRINTS:PR00114	ScanProsite:PS00125	PANTHER:PTHR11668
PANTHER:PTHR11668:SF399	SMART:SM00156	SUPFAM:SSF117281	SUPFAM:SSF56300	InterPro:Ser/Thr-sp_prot-phosphatase	InterPro:Ser/Thr_prot_Pase_BSU1
UniParc:UPI0001B09212	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr13:+:40744377..40756946

Molecular Weight (calculated)

105242.0 Da

IEP (calculated)

5.383

GRAVY (calculated)

-0.213

Length

988 amino acids

Sequence
(BLAST)

001: MDVDSSMVPE TDHDPAAQNH AAAAPAPDAA EGEQLAEPPS SGDGSPEQAA ASAPQSPVVG PRLAPTYTVV NAILEKKEDG PGPRCGHTLT AVAAVGEEGT
101: PGYIGPRLIL FGGATALEGN SAASGTPSSA GNAGIRLAGA TADVHCYDVL TNKWSRITPF GEPPTPRAAH VATAVGTMVV IQGGIGPAGL SAEDLHVLDL
201: TQQWPRWHRV SVQGPGPGPR YGHVMALVGQ RYLMAIGGND GKRPLADVWA LDTAAKPYEW RKLEPEGEGP PPCMYATASA RSDGLLLLCG GRDANSVPLS
301: SAYGLAKHRD GRWEWAIAPG VSPSPRYQHA AVFVNARLHV SGGALGGGRM VEDSSSVAVL DTAAGVWCDT KSVVTSPRTG RYSADAAGGD AAVELTRRCR
401: HAAAAVGDLI FIYGGLRGGV LLDDLLVAED LAAAETTAAS NVQAGRLPER YGFADDRTRE TMPEAAADGS VVLGNPVAPP MNGDIYTDIS TENAMLQGPR
501: RTARGVEYLV EASAAEAEAI SAALAAAKAR QENGEVELPD RDRGAEATPS GKETSSLIKP DSAGSNNITP GGVRLHHRAV VVAAETGGAL GGMVRQLSID
601: QFENEGRRVG YGTPENATAA RKLLDRQMSI NSVPKKVIAH LLKPRGWKPP VRRQFFLDCN EIADLCDSAE RIFSSEPSVL QLRAPIKIFG DLHGQFGDLM
701: RLFDEYGAPS TAGDIAYIDY LFLGDYVDRG QHSLETITLL LALKVEYPNN VHLIRGNHEA ADINALFGFR IECIERMGER DGIWTWHRIN KLFNWLPLAA
801: LIEKKIICMH GGIGRSINHV EQIENIQRPI PMEAGSIVLM DLLWSDPTEN DSVEGLRPNA RGPGLVTFGP DRVMEFCNNN DLQLIVRAHE CVMDGFERFA
901: QGHLITLFSA TNYCGTANNA GAILVLGRDL VVVPKLIHPL PPAISSPETS PERHIEDTWM QELNANRPPT PTRGRPPVTN DRGSLAWI

Best Arabidopsis Sequence Match ( AT4G03080.1 )
(BLAST)

001: MGSKPWLHPA PQYKTLETFW DDEDDAPGPR CAHTLTAVAA TKTHGPRLIL FGGATAIEGG SSSVPGIRLA GVTNTVHSYD ILTRKWTRLK PAGEPPSPRA
101: AHAAAAVGTM VVFQGGIGPA GHSTDDLYVL DMTNDKFKWH RVVVQGDGPG PRYGHVMDLV SQRYLVTVTG NDGKRALSDA WALDTAQKPY VWQRLNPDGD
201: RPSARMYASG SARSDGMFLL CGGRDTLGAP LGDAYGLLMH RNGQWEWTLA PGVAPSPRYQ HAAVFVGARL HVSGGVLRGG RVIDAEASVA VLDTAAGVWL
301: DRNGQVTSAR GSKGQIDQDP SFELMRRCRH GAASVGIRIY VHGGLRGDVL LDDFLVAENS TFQSDISSPL LASDRTQQSS TPRFSYAARP PSGSEPSFSM
401: SEGLSLDENS LEKLTEASAA EAEVASSVWR AAQLGAGTLD EEPSTSDASS PIVESTTDGT ANEGDVRLHP RAVVVAKETV GSLGGMVRQL SLDQFQNESR
501: RMVPMNNSDV PQPTKKFTRQ KSPQGLHKKV IAALLRPRNW KPPGNRKFFL DSYEVGELCY AAEQIFMHEQ TVLQLKAPIK VFGDLHGQFG DLMRLFDEYG
601: FPSTAGDITY IDYLFLGDYV DRGQHSLETI TLLLALKIEY PENVHLIRGN HEAADINALF GFRLECIERM GENDGIWAWT RFNQLFNYLP LAALIENKII
701: CMHGGIGRSI STVEQIEKIE RPITMDAGSL VLMDLLWSDP TENDSIEGLR PNARGPGLVT FGPDRVTEFC KRNKLQLIIR AHECVMDGFE RFAQGQLITL
801: FSATNYCGTA NNAGAILVVG RGLVIVPKLI HPLPPPILSP ENSPEHSGDD AWMQELNIQR PPTPTRGRPQ PDFDRSSLAY I

Arabidopsis Description

BSL1Serine/threonine-protein phosphatase BSL1 [Source:UniProtKB/Swiss-Prot;Acc:Q8L7U5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.