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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 3
  • cytosol 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
nucleus: 21132161
msms PMID: 21132161 doi
B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick
Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH10039 Soybean cytosol, plastid 21.66 65.07
KRH39390 Soybean cytosol, plastid 31.98 47.93
KRH07839 Soybean cytosol 31.69 47.49
AT5G10900.2 Thale cress cytosol 35.47 38.92
CDX85736 Canola cytosol 34.74 38.3
Bra028558.1-P Field mustard cytosol 34.45 37.98
CDY40129 Canola plastid 34.16 35.5
KRH30592 Soybean cytosol, extracellular 2.33 25.0
KRH49745 Soybean cytosol 6.4 24.18
KRH46082 Soybean cytosol 17.59 22.41
KRG98883 Soybean cytosol 17.44 22.22
KRH31949 Soybean nucleus 18.9 14.76
KRH71506 Soybean cytosol 18.6 14.53
KRH22626 Soybean nucleus 18.31 12.75
KRH25329 Soybean cytosol 18.46 12.64
KRG88879 Soybean cytosol 18.46 12.52
KRH26699 Soybean cytosol 18.17 12.41
Protein Annotations
KEGG:04658+3.1.3.16KEGG:04660+3.1.3.16EntrezGene:100779241MapMan:18.4.24.1.6Gene3D:3.60.21.10EMBL:ACUP02008459
InterPro:Calcineurin-like_PHP_ApaHEnsemblPlantsGene:GLYMA_13G348300GO:GO:0003674GO:GO:0003824GO:GO:0004721GO:GO:0006464
GO:GO:0006470GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016787GO:GO:0019538
InterPro:IPR029052UniProt:K7M3M0EnsemblPlants:KRH23278ProteinID:KRH23278ProteinID:KRH23278.1InterPro:Metallo-depent_PP-like
PFAM:PF00149PRINTS:PR00114ScanProsite:PS00125SMART:SM00156SUPFAM:SSF56300InterPro:Ser/Thr-sp_prot-phosphatase
UniParc:UPI00023CEDEFSEG:seg::::
Description
hypothetical protein
Coordinates
chr13:+:43842173..43849038
Molecular Weight (calculated)
77356.4 Da
IEP (calculated)
6.033
GRAVY (calculated)
-0.344
Length
688 amino acids
Sequence
(BLAST)
001: MDPRKERIKN GCLKILEGIN SMSLVNLDDQ QVHSLVMMRE IARGVVDDRD RKVTKSDVIT ALRHSIEKMV CASRDIIQIL SRMSFEGLDD QSMHLVMRMK
101: EIANGVIDKQ PRVAITRPDL LAEQVGFVDE GMRDSPVVES TKISNGYVPI GGAQSMTNED EMLDVEHVLR FENGIDEVHE SLLPCFQQFL LWPPDDCVTL
201: EWVQDMMVIL EQASQKMLPS EFCHIVPAIL VDKLADAACS ILCKEPNCVE INCQGEDSKV IVVGDVHGQF HDLMFLFKHA GVPSENRIYV FNGNYVDKGA
301: WGIEVFLFLL AWKVLMPHRV YLLRGNHESR YCTARYGFKK EVWAKYGDQG EDVYNKFLAC FKELPLASVI ANCVYTTHGG LFRSIHAAPS QKPKRNKTHR
401: VDLGSLAELS EVKRSFVDCP YEGPNILLSD VLWSRPSNRD GLRDNTGQKL GLLWGPDCTE AFLKQYNLKL IIRSHEGPDA RAGRDDDFGD MLSGYSIDHD
501: GESGRLYTLF SAPDYPQFGK RRYNNKGAYA VLKSPDFASP SFHSFKAAER PMVDPYFDFD ANYMESSKLD SSQSASTSTL SAPQRFYSDG MRPEFDFGAL
601: GIYNAPGWRV ELPDGSGGTQ AVEVPRAPLA EGLPLPPNIQ EPHKAAYEYL FELVAGLKHM IVTRETENRA PVSALRSRTR KREGKGNS
Best Arabidopsis Sequence Match ( AT5G10900.2 )
(BLAST)
001: MPPPEISKRV LDSKLEACKF AFLKLSAVKT TRMKNYKQLR TLLMLKEISR RGADRDFLKD PENSVTRILC SVLKQVVSNS DRSLKSLRGF QYETLDDQEK
101: QQVTRMIASV QGMGSRKYEP ETVDHLEDMT EPIEMEIYLG NGDGGDFGDI VLEPISWPLE SQLTLEWVET LMGLLNQSTW KNSVSEFSLI LPHSVAVSLV
201: DCASQILEKE ANCVKINGCS EDSRVIVVGD LHGQLHDLLK IFDQSGRPSQ NQCFVFNGNY IGRGSWSLEV FLVLLAWKIM MPENVILLRG SSETRVSAEE
301: LDFLKDICDR YGEHGPMLYS KCIDCFKMLP LASVISNSVY TTHGGLFQSC GVHEESPNPS LLLGSLEELD KIERRQAGEN DDENITLNHV LWSCPWMADG
401: LSESNYKGLL WGADCTETFL QQSNLKMIIR SHEGPDARAD REDMGNMLSG YSIDHEVESG KLCTVFSASM FSQGSRNYEN EGAYAVLEPP NFTEPVFVSY
501: TVENVPRLQH QIISDGSSTQ QQQMWENRTG HGFASMGISN PPSWTVPLPN DPSQILQLRE PPQVFEGLPL PDNIQEPHKS NYDYLFRLIS ALKQEIQTRD
601: NREKELMDHL TKTKATLEVI SQMSSSL
Arabidopsis Description
Calcineurin-like metallo-phosphoesterase superfamily protein [Source:TAIR;Acc:AT5G10900]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.