CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX92357	Canola	cytosol	100.0	100.0
CDX98576	Canola	cytosol	100.0	100.0
CDX99943	Canola	cytosol	100.0	100.0
ATCG00500.1	Thale cress	cytosol	91.62	91.8
GSMUA_Achr10P...	Banana	cytosol	11.25	78.57
CDX81526	Canola	cytosol	10.22	52.08

Protein Annotations

KEGG:00061+6.4.1.2	KEGG:00253+6.4.1.2	KEGG:00254+6.4.1.2	KEGG:00620+6.4.1.2	KEGG:00640+6.4.1.2	KEGG:00720+6.4.1.2
Gene3D:3.90.226.10	MapMan:5.1.3.2.2	ProteinID:ACY66222.1	ProteinID:AEQ19133.1	ProteinID:AKD00098.1	ProteinID:ASY95024.1
InterPro:AcCoA_carboxyl	InterPro:Acetyl_CoA_COase_Trfase_b_su	EnsemblPlants:CDX99936	ProteinID:CDX99936	ProteinID:CDX99936.1	InterPro:COA_CT_N
InterPro:ClpP/crotonase-like_dom_sf	GO:D1L8P7	UniProt:D1L8P7	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0003989	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006629	GO:GO:0006631	GO:GO:0006633	GO:GO:0008150	GO:GO:0008152
GO:GO:0008270	GO:GO:0009058	GO:GO:0009317	GO:GO:0009507	GO:GO:0009536	GO:GO:0009570
GO:GO:0009987	GO:GO:0016740	GO:GO:0016743	GO:GO:0016874	GO:GO:0046872	GO:GO:2001295
EnsemblPlantsGene:GSBRNA2T00108784001	InterPro:IPR011762	HAMAP:MF_01395	PFAM:PF01039	PRINTS:PR01070	PFscan:PS50980
PANTHER:PTHR42995	PANTHER:PTHR42995:SF3	MetaCyc:PWY-4381	MetaCyc:PWY-5743	MetaCyc:PWY-5744	MetaCyc:PWY-5789
MetaCyc:PWY-6679	MetaCyc:PWY-6722	MetaCyc:PWY-7388	SUPFAM:SSF52096	TIGRFAMs:TIGR00515	UniPathway:UPA00655
UniParc:UPI0001BBFF99	:	:	:	:	:

Description

BnaC09g27690DAcetyl-coenzyme A carboxylase carboxyl transferase subunit beta [Source:UniProtKB/TrEMBL;Acc:D1L8P7]

Coordinates

chrLK031915:+:958407..959876

Molecular Weight (calculated)

55584.0 Da

IEP (calculated)

6.838

GRAVY (calculated)

-0.421

Length

489 amino acids

Sequence
(BLAST)

001: MEKSWFNLMF SKGELEYRGE LSKAMDSFAP IEKTTISKDR FIYDMDKNFY GWGERSSYYN NVDLLVNSKD IRNFISDDTF FVRDSNKNSY SIYFDIKKKK
101: FEINNDLSDL EIFFYSYCSS SYLNNRSKGD NDLHYDPYIK DTKYNCNNHI NSCIDSYFRS HICINSHFLS DSNNSNESYI YNFICSESGS GKIRESKNDK
201: IRTNSNRNNL MSSKDFDITK NYNQLWIQCD NCYGLMYKKV EMNVCEECGH YLKMTSSERI ELSIDPGTWN PMDEDMVSAD PIKFHSREEP YKKRIASAQK
301: KTGLTDAIQT GTGQLNGIPV ALGVMDFQFM GGSMGSVVGE KITRLIEYAT NQCLPLILVC SSGGARMQEG SLSLMQMAKI SSVLCDYQSS KKLFYISILT
401: SPTTGGVTAS FGMLGDIIIA EPYAYIAFAG KRVIEQTLKK AVPEGSQAAE SLLRKGLLDA IVPRNPLKGV VSELFQLHAF FPLNKNEIK

Best Arabidopsis Sequence Match ( ATCG00500.1 )
(BLAST)

001: MEKSWFNFMF SKGELEYRGE LSKAMDSFAP GEKTTISQDR FIYDMDKNFY GWDERSSYSS SYSNNVDLLV SSKDIRNFIS DDTFFVRDSN KNSYSIFFDK
101: KKKIFEIDND FSDLEKFFYS YCSSSYLNNR SKGDNDLHYD PYIKDTKYNC TNHINSCIDS YFRSYICIDN NFLIDSNNFN ESYIYNFICS ESGKIRESKN
201: YKIRTNRNRS NLISSKDFDI TQNYNQLWIQ CDNCYGLMYK KVKMNVCEQC GHYLKMSSSE RIELSIDPGT WNPMDEDMVS ADPIKFHSKE EPYKNRIDSA
301: QKTTGLTDAV QTGTGQLNGI PVALGVMDFR FMGGSMGSVV GEKITRLIEY ATNQCLPLIL VCSSGGARMQ EGSLSLMQMA KISSVLCDYQ SSKKLFYISI
401: LTSPTTGGVT ASFGMLGDII IAEPYAYIAF AGKRVIEQTL KKAVPEGSQA AESLLRKGLL DAIVPRNLLK GVLSELFQLH AFFPLNTN

Arabidopsis Description

ACCDAcetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [Source:UniProtKB/TrEMBL;Acc:A0A1B1W4V3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.