Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc01g017200.1.1 | Tomato | cytosol | 19.79 | 16.81 |
| CDX92357 | Canola | cytosol | 52.08 | 10.22 |
| CDX98576 | Canola | cytosol | 52.08 | 10.22 |
| CDX99936 | Canola | cytosol | 52.08 | 10.22 |
| CDX99943 | Canola | cytosol | 52.08 | 10.22 |
| Solyc04g039830.1.1 | Tomato | cytosol | 19.79 | 9.13 |
| Solyc04g039820.1.1 | Tomato | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 3.12 | 3.66 |
| GSMUA_Achr10P... | Banana | cytosol | 1.04 | 1.43 |
| Solyc09g091410.1.1 | Tomato | cytosol | 1.04 | 0.61 |
Protein Annotations
| EnsemblPlants:CDX81526 | EnsemblPlantsGene:GSBRNA2T00135190001 | Gene3D:3.90.226.10 | InterPro:ClpP/crotonase-like_dom_sf | PANTHER:PTHR42995 | PANTHER:PTHR42995:SF3 |
| ProteinID:CDX81526 | ProteinID:CDX81526.1 | SUPFAM:SSF52096 | UniParc:UPI0004EED7A8 | MapMan:35.1 | : |
Description
BnaC02g18300D
Coordinates
chrLK031825:+:973931..974221
Molecular Weight (calculated)
11354.3 Da
IEP (calculated)
4.437
GRAVY (calculated)
-0.975
Length
96 amino acids
Sequence
(BLAST)
(BLAST)
1: MYKKVEMNVC EECGHYLKMT SSERIELSID PGTWNPMDED RVTSSYDSVR HEDSQSRADL MMDNNVVEQL REEEHDTRTR FENMEGLFKA MIARQT
001: MEKSWFNFMF SKGELEYRGE LSKAMDSFAP GEKTTISQDR FIYDMDKNFY GWDERSSYSS SYSNNVDLLV SSKDIRNFIS DDTFFVRDSN KNSYSIFFDK
101: KKKIFEIDND FSDLEKFFYS YCSSSYLNNR SKGDNDLHYD PYIKDTKYNC TNHINSCIDS YFRSYICIDN NFLIDSNNFN ESYIYNFICS ESGKIRESKN
201: YKIRTNRNRS NLISSKDFDI TQNYNQLWIQ CDNCYGLMYK KVKMNVCEQC GHYLKMSSSE RIELSIDPGT WNPMDEDMVS ADPIKFHSKE EPYKNRIDSA
301: QKTTGLTDAV QTGTGQLNGI PVALGVMDFR FMGGSMGSVV GEKITRLIEY ATNQCLPLIL VCSSGGARMQ EGSLSLMQMA KISSVLCDYQ SSKKLFYISI
401: LTSPTTGGVT ASFGMLGDII IAEPYAYIAF AGKRVIEQTL KKAVPEGSQA AESLLRKGLL DAIVPRNLLK GVLSELFQLH AFFPLNTN
101: KKKIFEIDND FSDLEKFFYS YCSSSYLNNR SKGDNDLHYD PYIKDTKYNC TNHINSCIDS YFRSYICIDN NFLIDSNNFN ESYIYNFICS ESGKIRESKN
201: YKIRTNRNRS NLISSKDFDI TQNYNQLWIQ CDNCYGLMYK KVKMNVCEQC GHYLKMSSSE RIELSIDPGT WNPMDEDMVS ADPIKFHSKE EPYKNRIDSA
301: QKTTGLTDAV QTGTGQLNGI PVALGVMDFR FMGGSMGSVV GEKITRLIEY ATNQCLPLIL VCSSGGARMQ EGSLSLMQMA KISSVLCDYQ SSKKLFYISI
401: LTSPTTGGVT ASFGMLGDII IAEPYAYIAF AGKRVIEQTL KKAVPEGSQA AESLLRKGLL DAIVPRNLLK GVLSELFQLH AFFPLNTN
Arabidopsis Description
ACCDAcetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [Source:UniProtKB/TrEMBL;Acc:A0A1B1W4V3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.