CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 5
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY56386	Canola	mitochondrion	100.0	100.0
CDX74252	Canola	cytosol	55.84	42.15
CDY51543	Canola	cytosol	55.33	41.76
CDY28698	Canola	cytosol	55.33	41.76
CDX91996	Canola	cytosol	54.82	41.38
CDY71290	Canola	cytosol	51.78	39.69
CDX68022	Canola	cytosol	52.28	39.62
CDY14618	Canola	cytosol	52.28	39.62
CDX79255	Canola	cytosol	52.28	39.62
CDX67405	Canola	cytosol	51.78	39.53
CDY01659	Canola	cytosol	51.27	39.3
CDX74521	Canola	cytosol	51.27	39.3
CDX88436	Canola	cytosol	51.78	39.23
CDY12024	Canola	cytosol	50.76	38.31
CDY46646	Canola	cytosol	49.75	37.69
CDY28408	Canola	cytosol	50.25	37.64
CDY41483	Canola	cytosol	49.24	37.45
CDY00447	Canola	cytosol	49.24	37.31
CDX91676	Canola	cytosol	48.73	37.07
CDX73313	Canola	cytosol	49.75	36.98
CDX81287	Canola	cytosol	46.7	36.95
CDY54716	Canola	cytosol	46.19	36.55
CDY08794	Canola	cytosol	45.69	36.29
CDY14562	Canola	cytosol	45.69	36.29
CDX97016	Canola	cytosol	41.62	35.96
CDX81179	Canola	cytosol	44.67	35.2
CDX78381	Canola	cytosol	44.67	35.2
CDX85759	Canola	cytosol	44.16	35.08
CDY40098	Canola	cytosol	44.16	35.08
CDY69181	Canola	cytosol	44.16	34.39
CDX87455	Canola	cytosol	51.78	34.11
CDY38227	Canola	cytosol	43.65	33.99
CDY42826	Canola	cytosol	46.19	33.58
CDY16161	Canola	cytosol	45.69	33.46
CDX85023	Canola	cytosol	45.69	33.33
CDY61201	Canola	cytosol	45.69	33.09
CDY40251	Canola	cytosol	39.59	31.84
CDX87464	Canola	cytosol	33.5	31.13
CDX88428	Canola	cytosol	37.56	30.71
CDY48771	Canola	cytosol	27.41	29.67
CDY20560	Canola	cytosol	39.59	29.21
CDY61631	Canola	cytosol	45.18	27.13
CDY24128	Canola	cytosol	44.67	26.83
CDX91673	Canola	cytosol	36.04	26.39
CDY03135	Canola	cytosol	42.64	21.32
CDX97014	Canola	cytosol, plastid	6.09	10.91

Protein Annotations

Gene3D:1.20.190.20	InterPro:14-3-3	InterPro:14-3-3_dom_sf	InterPro:14-3-3_domain	MapMan:35.1	GO:A0A078IQM6
UniProt:A0A078IQM6	EnsemblPlants:CDY52206	ProteinID:CDY52206	ProteinID:CDY52206.1	ProteinID:CDY56386.1	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0019904	EnsemblPlantsGene:GSBRNA2T00005150001	InterPro:IPR036815	PFAM:PF00244
PRINTS:PR00305	PANTHER:PTHR18860	PANTHER:PTHR18860:SF26	SMART:SM00101	SUPFAM:SSF48445	UniParc:UPI0004EDF8C3
SEG:seg	:	:	:	:	:

Description

BnaC09g52760DBnaC09g52760D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IQM6]

Coordinates

chrLK033065:-:75918..76898

Molecular Weight (calculated)

22691.7 Da

IEP (calculated)

10.157

GRAVY (calculated)

-0.326

Length

197 amino acids

Sequence
(BLAST)

001: MIWLNSWTKL QRPLTLPSLL LKKNLLSIAY KNFIAGRRAS LKRIRSIEKK ETKKGNTDNV SFIKDHRVKI ETEINNICDR IFNLIDSHLL PNASTDDSKV
101: FYLKMKGDYH RYLFYSKTGA ARVQAVKDTL EIYKSAQVIA LNLPSTDIPR LGLALNLSLF YYETLMSTKV ACLTAKEKYD CDDAGRLTMR QSLNYTQ

Best Arabidopsis Sequence Match ( AT3G02520.1 )
(BLAST)

001: MSSSREENVY LAKLAEQAER YEEMVEFMEK VAKTVDTDEL TVEERNLLSV AYKNVIGARR ASWRIISSIE QKEESRGNDD HVSIIKDYRG KIETELSKIC
101: DGILNLLDSH LVPTASLAES KVFYLKMKGD YHRYLAEFKT GAERKEAAES TLVAYKSAQD IALADLAPTH PIRLGLALNF SVFYYEILNS PDRACSLAKQ
201: AFDEAISELD TLGEESYKDS TLIMQLLRDN LTLWNSDIND EAGGDEIKEA SKHEPEEGKP AETGQ

Arabidopsis Description

GRF714-3-3-like protein GF14 nu [Source:UniProtKB/Swiss-Prot;Acc:Q96300]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.