Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX78381 | Canola | cytosol | 98.8 | 98.8 |
| Bra006061.1-P | Field mustard | cytosol | 98.0 | 97.61 |
| CDY40098 | Canola | cytosol | 94.4 | 95.16 |
| CDX85759 | Canola | cytosol | 94.4 | 95.16 |
| CDX97016 | Canola | cytosol | 83.2 | 91.23 |
| CDY54716 | Canola | cytosol | 90.0 | 90.36 |
| CDX81287 | Canola | cytosol | 90.0 | 90.36 |
| CDY14562 | Canola | cytosol | 89.2 | 89.92 |
| CDY08794 | Canola | cytosol | 88.8 | 89.52 |
| VIT_18s0001g07240.t01 | Wine grape | cytosol | 85.2 | 84.52 |
| PGSC0003DMT400041634 | Potato | cytosol | 83.2 | 83.53 |
| Solyc11g010470.1.1 | Tomato | extracellular, nucleus | 83.2 | 83.53 |
| AT5G10450.4 | Thale cress | cytosol | 91.2 | 83.52 |
| VIT_00s0199g00190.t01 | Wine grape | cytosol | 80.8 | 79.84 |
| GSMUA_Achr3P06740_001 | Banana | cytosol | 68.0 | 76.58 |
| CDX74521 | Canola | cytosol | 74.0 | 71.98 |
| CDY01659 | Canola | cytosol | 74.0 | 71.98 |
| CDX79255 | Canola | cytosol | 74.4 | 71.54 |
| CDX68022 | Canola | cytosol | 74.4 | 71.54 |
| CDX88436 | Canola | cytosol | 73.6 | 70.77 |
| EES14338 | Sorghum | cytosol | 73.2 | 70.66 |
| CDY51543 | Canola | cytosol | 73.6 | 70.5 |
| CDY71290 | Canola | cytosol | 72.4 | 70.43 |
| CDY28408 | Canola | cytosol | 74.0 | 70.34 |
| CDX67405 | Canola | cytosol | 72.4 | 70.16 |
| CDY28698 | Canola | cytosol | 73.2 | 70.11 |
| CDX91996 | Canola | cytosol | 73.2 | 70.11 |
| CDY14618 | Canola | cytosol | 72.8 | 70.0 |
| CDX73313 | Canola | cytosol | 74.0 | 69.81 |
| CDY12024 | Canola | cytosol | 72.8 | 69.73 |
| CDX74252 | Canola | cytosol | 72.8 | 69.73 |
| TraesCS7B01G183800.1 | Wheat | plastid | 72.0 | 68.97 |
| Os08t0480800-01 | Rice | plasma membrane | 72.8 | 68.94 |
| TraesCS7A01G295500.1 | Wheat | golgi | 71.2 | 68.73 |
| TraesCS7D01G292400.1 | Wheat | cytosol | 71.6 | 68.58 |
| CDX91676 | Canola | cytosol | 70.4 | 67.95 |
| CDY41483 | Canola | cytosol | 70.4 | 67.95 |
| CDY00447 | Canola | cytosol | 70.0 | 67.31 |
| CDY46646 | Canola | cytosol | 69.2 | 66.54 |
| Zm00001d052796_P003 | Maize | cytosol | 70.8 | 65.8 |
| CDY69181 | Canola | cytosol | 62.8 | 62.06 |
| CDY38227 | Canola | cytosol | 62.4 | 61.66 |
| CDX87455 | Canola | cytosol | 73.6 | 61.54 |
| Zm00001d006462_P001 | Maize | cytosol | 34.8 | 58.39 |
| CDY16161 | Canola | cytosol | 62.0 | 57.62 |
| CDX85023 | Canola | cytosol | 62.0 | 57.41 |
| CDY61201 | Canola | cytosol | 62.0 | 56.99 |
| CDY40251 | Canola | cytosol | 55.6 | 56.73 |
| CDY42826 | Canola | cytosol | 61.2 | 56.46 |
| CDY48771 | Canola | cytosol | 40.8 | 56.04 |
| CDY20560 | Canola | cytosol | 55.6 | 52.06 |
| CDY24128 | Canola | cytosol | 62.8 | 47.87 |
| CDY61631 | Canola | cytosol | 62.8 | 47.87 |
| CDX97014 | Canola | cytosol, plastid | 20.4 | 46.36 |
| CDX91673 | Canola | cytosol | 48.8 | 45.35 |
| CDX88428 | Canola | cytosol | 43.2 | 44.81 |
| CDY56386 | Canola | mitochondrion | 35.2 | 44.67 |
| CDY52206 | Canola | mitochondrion | 35.2 | 44.67 |
| CDX87464 | Canola | cytosol | 36.4 | 42.92 |
| CDY03135 | Canola | cytosol | 58.4 | 37.06 |
Protein Annotations
| Gene3D:1.20.190.20 | InterPro:14-3-3 | InterPro:14-3-3_CS | InterPro:14-3-3_dom_sf | InterPro:14-3-3_domain | MapMan:35.1 |
| GO:A0A078CYW7 | EnsemblPlants:CDX81179 | ProteinID:CDX81179 | ProteinID:CDX81179.1 | ncoils:Coil | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0019904 | EnsemblPlantsGene:GSBRNA2T00134637001 | InterPro:IPR036815 | PFAM:PF00244 |
| PIRSF:PIRSF000868 | PRINTS:PR00305 | ScanProsite:PS00796 | ScanProsite:PS00797 | PANTHER:PTHR18860 | PANTHER:PTHR18860:SF26 |
| SMART:SM00101 | SUPFAM:SSF48445 | UniParc:UPI00019D3449 | SEG:seg | : | : |
Description
BnaC03g04330D
Coordinates
chrLK031823:-:2069216..2071013
Molecular Weight (calculated)
27954.1 Da
IEP (calculated)
4.541
GRAVY (calculated)
-0.340
Length
250 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAATLGRDQ YVYMAKLAEQ AERYEEMVNF MESLVTGGAT SSSELTVEER NLLSVAYKNV IGSLRAAWRI VSSIEQKEES RKNEEHATLV KGYRSKVETE
101: LSSVCEGILK LLDSHLIPSA AASESKVFYL KMKGDYHRYM AEFKSGEERK AAAEDTMGAY KAAQDIAAAD MAPTHPIRLG LALNFSVFYY EILNSSDKAC
201: NMAKQAFEEA IAELDTLGEE SYKDSTLIMQ LLRDNLTLWT SDMQEQMDEA
101: LSSVCEGILK LLDSHLIPSA AASESKVFYL KMKGDYHRYM AEFKSGEERK AAAEDTMGAY KAAQDIAAAD MAPTHPIRLG LALNFSVFYY EILNSSDKAC
201: NMAKQAFEEA IAELDTLGEE SYKDSTLIMQ LLRDNLTLWT SDMQEQMDEA
001: MAATLGRDQY VYMAKLAEQA ERYEEMVQFM EQLVTGATPA EELTVEERNL LSVAYKNVIG SLRAAWRIVS SIEQKEESRK NDEHVSLVKD YRSKVESELS
101: SVCSGILKLL DSHLIPSAGA SESKVFYLKM KGDYHRYMAE FKSGDERKTA AEDTMLAYKA AQDIAAADMA PTHPIRLGLA LNFSVFYYEI LNSSDKACNM
201: AKQAFEEAIA ELDTLGEESY KDSTLIMQLL RDNLTLWTSD MQEQMDEA
101: SVCSGILKLL DSHLIPSAGA SESKVFYLKM KGDYHRYMAE FKSGDERKTA AEDTMLAYKA AQDIAAADMA PTHPIRLGLA LNFSVFYYEI LNSSDKACNM
201: AKQAFEEAIA ELDTLGEESY KDSTLIMQLL RDNLTLWTSD MQEQMDEA
Arabidopsis Description
GRF6G-box regulating factor 6 [Source:TAIR;Acc:AT5G10450]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.