Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra024384.1-P | Field mustard | cytosol | 99.6 | 99.6 |
| CDY14562 | Canola | cytosol | 99.6 | 99.6 |
| CDY54716 | Canola | cytosol | 97.18 | 96.79 |
| CDX81287 | Canola | cytosol | 96.77 | 96.39 |
| AT5G65430.3 | Thale cress | cytosol | 94.35 | 90.0 |
| CDY40098 | Canola | cytosol | 89.52 | 89.52 |
| CDX85759 | Canola | cytosol | 89.52 | 89.52 |
| CDX78381 | Canola | cytosol | 89.92 | 89.2 |
| CDX81179 | Canola | cytosol | 89.52 | 88.8 |
| CDX97016 | Canola | cytosol | 80.24 | 87.28 |
| PGSC0003DMT400041634 | Potato | cytosol | 84.27 | 83.94 |
| Solyc11g010470.1.1 | Tomato | extracellular, nucleus | 84.27 | 83.94 |
| VIT_18s0001g07240.t01 | Wine grape | cytosol | 84.27 | 82.94 |
| VIT_00s0199g00190.t01 | Wine grape | cytosol | 83.47 | 81.82 |
| GSMUA_Achr3P06740_001 | Banana | cytosol | 68.15 | 76.13 |
| CDX67405 | Canola | cytosol | 75.0 | 72.09 |
| CDY71290 | Canola | cytosol | 74.6 | 71.98 |
| CDX74521 | Canola | cytosol | 74.19 | 71.6 |
| CDY01659 | Canola | cytosol | 74.19 | 71.6 |
| CDX88436 | Canola | cytosol | 74.6 | 71.15 |
| CDX91996 | Canola | cytosol | 74.6 | 70.88 |
| CDX79255 | Canola | cytosol | 74.19 | 70.77 |
| CDX68022 | Canola | cytosol | 74.19 | 70.77 |
| CDY28408 | Canola | cytosol | 75.0 | 70.72 |
| CDX73313 | Canola | cytosol | 75.4 | 70.57 |
| CDY12024 | Canola | cytosol | 74.19 | 70.5 |
| CDY28698 | Canola | cytosol | 73.39 | 69.73 |
| CDY51543 | Canola | cytosol | 73.39 | 69.73 |
| CDX74252 | Canola | cytosol | 73.39 | 69.73 |
| CDY14618 | Canola | cytosol | 72.98 | 69.62 |
| EES14338 | Sorghum | cytosol | 71.77 | 68.73 |
| CDY41483 | Canola | cytosol | 71.77 | 68.73 |
| CDX91676 | Canola | cytosol | 71.37 | 68.34 |
| TraesCS7B01G183800.1 | Wheat | plastid | 71.77 | 68.2 |
| TraesCS7D01G292400.1 | Wheat | cytosol | 71.77 | 68.2 |
| Os08t0480800-01 | Rice | plasma membrane | 72.18 | 67.8 |
| CDY00447 | Canola | cytosol | 70.97 | 67.69 |
| TraesCS7A01G295500.1 | Wheat | golgi | 70.56 | 67.57 |
| CDY46646 | Canola | cytosol | 70.56 | 67.31 |
| Zm00001d052796_P003 | Maize | cytosol | 70.56 | 65.06 |
| CDY69181 | Canola | cytosol | 64.92 | 63.64 |
| CDY38227 | Canola | cytosol | 64.52 | 63.24 |
| CDX87455 | Canola | cytosol | 74.6 | 61.87 |
| CDY16161 | Canola | cytosol | 64.11 | 59.11 |
| Zm00001d006462_P001 | Maize | cytosol | 35.48 | 59.06 |
| CDX85023 | Canola | cytosol | 64.11 | 58.89 |
| CDY61201 | Canola | cytosol | 64.11 | 58.46 |
| CDY40251 | Canola | cytosol | 57.66 | 58.37 |
| CDY48771 | Canola | cytosol | 42.74 | 58.24 |
| CDY42826 | Canola | cytosol | 63.31 | 57.93 |
| CDY20560 | Canola | cytosol | 57.66 | 53.56 |
| CDY24128 | Canola | cytosol | 64.92 | 49.09 |
| CDY61631 | Canola | cytosol | 64.92 | 49.09 |
| CDX97014 | Canola | cytosol, plastid | 21.37 | 48.18 |
| CDX91673 | Canola | cytosol | 50.81 | 46.84 |
| CDY56386 | Canola | mitochondrion | 36.29 | 45.69 |
| CDY52206 | Canola | mitochondrion | 36.29 | 45.69 |
| CDX88428 | Canola | cytosol | 44.35 | 45.64 |
| CDX87464 | Canola | cytosol | 38.31 | 44.81 |
| CDY03135 | Canola | cytosol | 60.48 | 38.07 |
Protein Annotations
| Gene3D:1.20.190.20 | InterPro:14-3-3 | InterPro:14-3-3_CS | InterPro:14-3-3_dom_sf | InterPro:14-3-3_domain | MapMan:35.1 |
| GO:A0A078F6Y1 | UniProt:A0A078F6Y1 | EnsemblPlants:CDY08794 | ProteinID:CDY08794 | ProteinID:CDY08794.1 | ncoils:Coil |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0019904 | EnsemblPlantsGene:GSBRNA2T00000736001 | InterPro:IPR036815 |
| PFAM:PF00244 | PIRSF:PIRSF000868 | PRINTS:PR00305 | ScanProsite:PS00796 | ScanProsite:PS00797 | PANTHER:PTHR18860 |
| PANTHER:PTHR18860:SF27 | SMART:SM00101 | SUPFAM:SSF48445 | UniParc:UPI00018C704F | : | : |
Description
BnaA06g24300DBnaA06g24300D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F6Y1]
Coordinates
chrLK031989:+:460776..462794
Molecular Weight (calculated)
27993.2 Da
IEP (calculated)
4.537
GRAVY (calculated)
-0.316
Length
248 amino acids
Sequence
(BLAST)
(BLAST)
001: MAATLSRDQY VYMAKLAEQA ERYEEMVQFM ESLVSSATPA GELTVEERNL LSVAYKNVIG SLRAAWRIVS SIEQKEESRK NEEHVSLVKD YRSKVEGELS
101: TICSGILKLL DTHLIPSATA SESKVFYLKM KGDYHRYMAE FKSGDERKTA AEDTMIAYKA AQDVAVTDLA PTHPIRLGLA LNFSVFYYEI LNSSEKACSM
201: AKQAFEEAIA ELDTLGEESY KDSTLIMQLL RDNLTLWTSD MQEQMDEA
101: TICSGILKLL DTHLIPSATA SESKVFYLKM KGDYHRYMAE FKSGDERKTA AEDTMIAYKA AQDVAVTDLA PTHPIRLGLA LNFSVFYYEI LNSSEKACSM
201: AKQAFEEAIA ELDTLGEESY KDSTLIMQLL RDNLTLWTSD MQEQMDEA
001: MATTLSRDQY VYMAKLAEQA ERYEEMVQFM EQLVSGATPA GELTVEERNL LSVAYKNVIG SLRAAWRIVS SIEQKEESRK NEEHVSLVKD YRSKVETELS
101: SICSGILRLL DSHLIPSATA SESKVFYLKM KGDYHRYLAE FKSGDERKTA AEDTMIAYKA AQDVAVADLA PTHPIRLGLA LNFSVFYYEI LNSSEKACSM
201: AKQAFEEAIA ELDTLGEESY KDSTLIMQLL RDNLTLWTSD MQEQMDEA
101: SICSGILRLL DSHLIPSATA SESKVFYLKM KGDYHRYLAE FKSGDERKTA AEDTMIAYKA AQDVAVADLA PTHPIRLGLA LNFSVFYYEI LNSSEKACSM
201: AKQAFEEAIA ELDTLGEESY KDSTLIMQLL RDNLTLWTSD MQEQMDEA
Arabidopsis Description
GRF8General regulatory factor 8 [Source:UniProtKB/TrEMBL;Acc:F4KHY7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.