Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY40098 | Canola | cytosol | 91.67 | 84.27 |
| CDX85759 | Canola | cytosol | 91.67 | 84.27 |
| CDX78381 | Canola | cytosol | 92.11 | 84.0 |
| CDX81179 | Canola | cytosol | 91.23 | 83.2 |
| CDY14562 | Canola | cytosol | 87.72 | 80.65 |
| CDY54716 | Canola | cytosol | 87.72 | 80.32 |
| CDY08794 | Canola | cytosol | 87.28 | 80.24 |
| CDX81287 | Canola | cytosol | 87.28 | 79.92 |
| VIT_18s0001g07240.t01 | Wine grape | cytosol | 82.89 | 75.0 |
| AT5G10450.4 | Thale cress | cytosol | 89.47 | 74.73 |
| PGSC0003DMT400041634 | Potato | cytosol | 80.7 | 73.9 |
| Solyc11g010470.1.1 | Tomato | extracellular, nucleus | 80.7 | 73.9 |
| VIT_00s0199g00190.t01 | Wine grape | cytosol | 78.51 | 70.75 |
| GSMUA_Achr3P06740_001 | Banana | cytosol | 65.35 | 67.12 |
| CDY51543 | Canola | cytosol | 72.37 | 63.22 |
| CDX67405 | Canola | cytosol | 71.49 | 63.18 |
| CDY71290 | Canola | cytosol | 71.05 | 63.03 |
| CDY01659 | Canola | cytosol | 71.05 | 63.03 |
| CDX74521 | Canola | cytosol | 71.05 | 63.03 |
| CDX91996 | Canola | cytosol | 71.93 | 62.84 |
| CDY28698 | Canola | cytosol | 71.93 | 62.84 |
| CDY28408 | Canola | cytosol | 71.93 | 62.36 |
| CDX68022 | Canola | cytosol | 71.05 | 62.31 |
| CDX79255 | Canola | cytosol | 71.05 | 62.31 |
| CDX88436 | Canola | cytosol | 71.05 | 62.31 |
| CDX73313 | Canola | cytosol | 72.37 | 62.26 |
| CDX74252 | Canola | cytosol | 71.05 | 62.07 |
| CDY12024 | Canola | cytosol | 70.61 | 61.69 |
| CDY14618 | Canola | cytosol | 70.18 | 61.54 |
| EES14338 | Sorghum | cytosol | 69.3 | 61.0 |
| Os08t0480800-01 | Rice | plasma membrane | 70.61 | 60.98 |
| TraesCS7A01G295500.1 | Wheat | golgi | 68.86 | 60.62 |
| TraesCS7B01G183800.1 | Wheat | plastid | 69.3 | 60.54 |
| TraesCS7D01G292400.1 | Wheat | cytosol | 68.86 | 60.15 |
| CDY41483 | Canola | cytosol | 67.54 | 59.46 |
| CDX91676 | Canola | cytosol | 67.11 | 59.07 |
| Zm00001d052796_P003 | Maize | cytosol | 68.86 | 58.36 |
| CDY00447 | Canola | cytosol | 66.23 | 58.08 |
| CDY46646 | Canola | cytosol | 65.35 | 57.31 |
| Zm00001d006462_P001 | Maize | cytosol | 37.28 | 57.05 |
| CDX87455 | Canola | cytosol | 71.05 | 54.18 |
| CDY69181 | Canola | cytosol | 60.09 | 54.15 |
| CDY48771 | Canola | cytosol | 42.98 | 53.85 |
| CDY38227 | Canola | cytosol | 59.65 | 53.75 |
| CDY61201 | Canola | cytosol | 60.53 | 50.74 |
| CDY16161 | Canola | cytosol | 59.21 | 50.19 |
| CDY42826 | Canola | cytosol | 59.65 | 50.18 |
| CDX85023 | Canola | cytosol | 59.21 | 50.0 |
| CDY40251 | Canola | cytosol | 52.63 | 48.98 |
| CDY20560 | Canola | cytosol | 52.63 | 44.94 |
| CDX97014 | Canola | cytosol, plastid | 21.49 | 44.55 |
| CDY24128 | Canola | cytosol | 60.09 | 41.77 |
| CDY61631 | Canola | cytosol | 60.09 | 41.77 |
| CDY56386 | Canola | mitochondrion | 35.96 | 41.62 |
| CDY52206 | Canola | mitochondrion | 35.96 | 41.62 |
| CDX88428 | Canola | cytosol | 42.98 | 40.66 |
| CDX91673 | Canola | cytosol | 46.93 | 39.78 |
| CDX87464 | Canola | cytosol | 36.4 | 39.15 |
| CDY03135 | Canola | cytosol | 57.46 | 33.25 |
Protein Annotations
| Gene3D:1.20.190.20 | InterPro:14-3-3 | InterPro:14-3-3_CS | InterPro:14-3-3_dom_sf | InterPro:14-3-3_domain | MapMan:35.1 |
| GO:A0A078E750 | EnsemblPlants:CDX97016 | ProteinID:CDX97016 | ProteinID:CDX97016.1 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0019904 | EnsemblPlantsGene:GSBRNA2T00103974001 | InterPro:IPR036815 | PFAM:PF00244 | PIRSF:PIRSF000868 |
| PRINTS:PR00305 | ScanProsite:PS00796 | ScanProsite:PS00797 | PANTHER:PTHR18860 | PANTHER:PTHR18860:SF26 | SMART:SM00101 |
| SUPFAM:SSF48445 | UniParc:UPI0004EECA3C | SEG:seg | : | : | : |
Description
BnaC09g46090D
Coordinates
chrLK031897:-:202765..208931
Molecular Weight (calculated)
25373.2 Da
IEP (calculated)
4.532
GRAVY (calculated)
-0.214
Length
228 amino acids
Sequence
(BLAST)
(BLAST)
001: MAATLGRDQY FMEQLVTSAA PSLIVEERNL LSVAYKNVIG SLRAALRIVS SIEQKEESRK NEEHAALVKD YRSKVEAELS SVCSGILKLL DEHLIPAAAG
101: SESKVFYMKM KGDYHRYMAE FKSGEEMKGA AEDTMVAYKA AQDIAAADMA PTHPIRLGLA LNFSVFYYEI LSSSDKACNV AKQAFEEAIA ELDTLGEESY
201: KDSTLIMQLL RDNLTLWTSD MQEQMDEA
101: SESKVFYMKM KGDYHRYMAE FKSGEEMKGA AEDTMVAYKA AQDIAAADMA PTHPIRLGLA LNFSVFYYEI LSSSDKACNV AKQAFEEAIA ELDTLGEESY
201: KDSTLIMQLL RDNLTLWTSD MQEQMDEA
001: MAATLGRDQY VYMAKLAEQA ERYEEMVQFM EQLVTGATPA EELTVEERNL LSVAYKNVIG SLRAAWRIVS SIEQKEESRK NDEHVSLVKD YRSKVESELS
101: SVCSGILKLL DSHLIPSAGA SESKVFYLKM KGDYHRYMAE FKSGDERKTA AEDTMLAYKA AQDIAAADMA PTHPIRLGLA LNFSVFYYEI LNSSDKACNM
201: AKQAFEEAIA ELDTLGEESY KDSTLIMQLL RDNLTLWTSD MQEQMDEA
101: SVCSGILKLL DSHLIPSAGA SESKVFYLKM KGDYHRYMAE FKSGDERKTA AEDTMLAYKA AQDIAAADMA PTHPIRLGLA LNFSVFYYEI LNSSDKACNM
201: AKQAFEEAIA ELDTLGEESY KDSTLIMQLL RDNLTLWTSD MQEQMDEA
Arabidopsis Description
GRF6G-box regulating factor 6 [Source:TAIR;Acc:AT5G10450]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.