Factsheet for VIT_18s0001g07240.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc11g010470.1.1	Tomato	extracellular, nucleus	86.11	87.15
PGSC0003DMT400041634	Potato	cytosol	86.11	87.15
CDX85759	Canola	cytosol	84.92	86.29
CDY40098	Canola	cytosol	84.92	86.29
CDX81179	Canola	cytosol	84.52	85.2
CDX78381	Canola	cytosol	84.13	84.8
Bra024384.1-P	Field mustard	cytosol	83.33	84.68
CDY14562	Canola	cytosol	83.33	84.68
VIT_00s0199g00190.t01	Wine grape	cytosol	84.92	84.58
Bra006061.1-P	Field mustard	cytosol	84.13	84.46
CDX81287	Canola	cytosol	83.33	84.34
CDY08794	Canola	cytosol	82.94	84.27
CDY54716	Canola	cytosol	82.94	83.94
Bra037818.1-P	Field mustard	cytosol	82.54	83.53
CDX97016	Canola	cytosol	75.0	82.89
AT5G65430.3	Thale cress	cytosol	84.13	81.54
Bra028586.1-P	Field mustard	cytosol	84.52	77.45
AT5G10450.4	Thale cress	cytosol	83.73	77.29
GSMUA_Achr3P06740_001	Banana	cytosol	67.86	77.03
VIT_18s0001g06330.t01	Wine grape	extracellular	76.19	73.85
VIT_07s0191g00090.t01	Wine grape	cytosol	74.6	73.73
VIT_14s0006g03230.t01	Wine grape	cytosol	76.19	73.28
EES14338	Sorghum	cytosol	70.63	68.73
TraesCS7A01G295500.1	Wheat	golgi	70.24	68.34
TraesCS7B01G183800.1	Wheat	plastid	70.24	67.82
TraesCS7D01G292400.1	Wheat	cytosol	70.24	67.82
Os08t0480800-01	Rice	plasma membrane	70.63	67.42
VIT_18s0001g05720.t01	Wine grape	cytosol	65.08	65.08
Zm00001d052796_P003	Maize	cytosol	69.05	64.68
VIT_01s0011g00620.t01	Wine grape	cytosol	64.68	61.51
VIT_19s0014g01420.t01	Wine grape	cytosol	63.1	60.23
Zm00001d006462_P001	Maize	cytosol	35.32	59.73
VIT_10s0003g01240.t01	Wine grape	cytosol	64.68	56.99
VIT_00s0199g00140.t01	Wine grape	cytosol	62.3	27.02

Protein Annotations

Gene3D:1.20.190.20	EntrezGene:100854545	wikigene:100854545	InterPro:14-3-3	InterPro:14-3-3_CS	InterPro:14-3-3_dom_sf
InterPro:14-3-3_domain	MapMan:35.1	UniProt:A5AX75	ProteinID:ACO40494	ProteinID:ACO40494.1	EMBL:AM438961
ProteinID:CAN80525	ProteinID:CAN80525.1	ProteinID:CCB45635	ProteinID:CCB45635.1	ncoils:Coil	EMBL:FJ824802
EMBL:FN595227	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0019904	InterPro:IPR036815
EntrezGene:LOC100854545	wikigene:LOC100854545	PFAM:PF00244	PIRSF:PIRSF000868	PRINTS:PR00305	ScanProsite:PS00796
ScanProsite:PS00797	PANTHER:PTHR18860	PANTHER:PTHR18860:SF27	SMART:SM00101	SUPFAM:SSF48445	TIGR:TC54584
UniParc:UPI0001523E17	ArrayExpress:VIT_18s0001g07240	EnsemblPlantsGene:VIT_18s0001g07240	EnsemblPlants:VIT_18s0001g07240.t01	RefSeq:XP_003634483	RefSeq:XP_003634483.1

Description

No Description!

Coordinates

chr18:-:5477686..5481158

Molecular Weight (calculated)

28651.1 Da

IEP (calculated)

4.512

GRAVY (calculated)

-0.322

Length

252 amino acids

Sequence
(BLAST)

001: MASTLPENLT REQYVYLAKL AEQAERYEEM VKFMEKLVIG WTSMSELTVE ERNLLSVAYK NVIGSLRAAW RIVSSIEQKE ESRKNEEHVA LVKDYRSTVE
101: TELSEVCAGI LKLLDSHLIP SASTSESKVF YMKMKGDYHR YLAEFKVGNE KKDAAEETML AYKSAQDIAL ADLAPTHPIR LGLALNFSVF YYEILNSSDK
201: ACSMAKQAFE EAIAELDTLG EESYKDSTLI MQLLRDNLTL WTSDAQDQLD EP

Best Arabidopsis Sequence Match ( AT5G65430.1 )
(BLAST)

001: MATTLSRDQY VYMAKLAEQA ERYEEMVQFM EQLVSGATPA GELTVEERNL LSVAYKNVIG SLRAAWRIVS SIEQKEESRK NEEHVSLVKD YRSKVETELS
101: SICSGILRLL DSHLIPSATA SESKVFYLKM KGDYHRYLAE FKSGDERKTA AEDTMIAYKA AQDVAVADLA PTHPIRLGLA LNFSVFYYEI LNSSEKACSM
201: AKQAFEEAIA ELDTLGEESY KDSTLIMQLL RDNLTLWTSD MQEQMDEA

Arabidopsis Description

GRF8General regulatory factor 8 [Source:UniProtKB/TrEMBL;Acc:F4KHY7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.