Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX67405 | Canola | cytosol | 99.22 | 98.84 |
| Bra028409.1-P | Field mustard | cytosol | 98.83 | 98.45 |
| CDX74521 | Canola | cytosol | 95.33 | 95.33 |
| CDY01659 | Canola | cytosol | 94.94 | 94.94 |
| AT5G38480.1 | Thale cress | cytosol | 94.16 | 94.9 |
| KRH01783 | Soybean | nucleus | 88.33 | 88.33 |
| Solyc03g034180.2.1 | Tomato | cytosol | 87.55 | 87.21 |
| VIT_14s0006g03230.t01 | Wine grape | cytosol | 88.33 | 86.64 |
| CDY51543 | Canola | cytosol | 87.55 | 86.21 |
| CDY28698 | Canola | cytosol | 87.16 | 85.82 |
| CDX91996 | Canola | cytosol | 87.16 | 85.82 |
| GSMUA_Achr5P23090_001 | Banana | cytosol | 43.97 | 85.61 |
| GSMUA_AchrUn_... | Banana | cytosol | 43.58 | 85.5 |
| PGSC0003DMT400062153 | Potato | cytosol | 86.38 | 85.38 |
| CDX74252 | Canola | cytosol | 86.38 | 85.06 |
| Solyc02g063070.2.1 | Tomato | plastid | 85.99 | 85.0 |
| GSMUA_AchrUn_... | Banana | cytosol | 43.58 | 84.85 |
| PGSC0003DMT400050389 | Potato | cytosol | 84.05 | 83.08 |
| KRH46909 | Soybean | cytosol | 84.05 | 83.08 |
| CDY14618 | Canola | cytosol | 82.49 | 81.54 |
| TraesCS4A01G268700.1 | Wheat | cytosol | 82.49 | 81.23 |
| HORVU4Hr1G007370.1 | Barley | plasma membrane | 82.49 | 81.23 |
| TraesCS4D01G046400.2 | Wheat | golgi | 82.49 | 81.23 |
| TraesCS4B01G045500.2 | Wheat | cytosol | 82.49 | 81.23 |
| CDX79255 | Canola | cytosol | 82.1 | 81.15 |
| Os03t0710800-01 | Rice | nucleus, plasma membrane | 82.1 | 81.15 |
| CDX68022 | Canola | cytosol | 82.1 | 81.15 |
| CDX88436 | Canola | cytosol | 81.71 | 80.77 |
| CDY12024 | Canola | cytosol | 81.32 | 80.08 |
| CDY28408 | Canola | cytosol | 80.93 | 79.09 |
| CDX73313 | Canola | cytosol | 80.54 | 78.11 |
| OQU83613 | Sorghum | cytosol | 80.54 | 77.82 |
| CDY41483 | Canola | cytosol | 78.21 | 77.61 |
| Zm00001d053090_P001 | Maize | plastid | 80.54 | 77.24 |
| CDX91676 | Canola | cytosol | 77.43 | 76.83 |
| Os11t0546900-01 | Rice | plasma membrane | 78.99 | 76.6 |
| TraesCS4D01G155900.1 | Wheat | plastid | 78.6 | 75.94 |
| CDX81287 | Canola | cytosol | 73.15 | 75.5 |
| CDY54716 | Canola | cytosol | 73.15 | 75.5 |
| CDY40098 | Canola | cytosol | 72.76 | 75.4 |
| CDX85759 | Canola | cytosol | 72.76 | 75.4 |
| CDY46646 | Canola | cytosol | 76.26 | 75.38 |
| CDY00447 | Canola | cytosol | 75.88 | 75.0 |
| CDY14562 | Canola | cytosol | 72.37 | 75.0 |
| TraesCS4A01G151000.2 | Wheat | cytosol | 78.6 | 74.81 |
| Zm00001d007446_P003 | Maize | cytosol | 80.16 | 74.64 |
| CDY08794 | Canola | cytosol | 71.98 | 74.6 |
| TraesCS4B01G159900.1 | Wheat | cytosol | 78.99 | 74.36 |
| CDX78381 | Canola | cytosol | 70.43 | 72.4 |
| CDX81179 | Canola | cytosol | 70.43 | 72.4 |
| CDX97016 | Canola | cytosol | 63.03 | 71.05 |
| CDX87455 | Canola | cytosol | 81.71 | 70.23 |
| Zm00001d048554_P001 | Maize | cytosol | 52.92 | 69.04 |
| HORVU4Hr1G043300.1 | Barley | cytosol | 79.38 | 68.0 |
| CDY69181 | Canola | cytosol | 66.93 | 67.98 |
| CDY38227 | Canola | cytosol | 66.54 | 67.59 |
| CDY16161 | Canola | cytosol | 68.48 | 65.43 |
| CDX85023 | Canola | cytosol | 68.48 | 65.19 |
| Zm00001d021885_P001 | Maize | mitochondrion | 41.63 | 64.85 |
| Zm00001d033357_P001 | Maize | cytosol | 52.53 | 64.59 |
| Zm00001d017434_P001 | Maize | cytosol | 51.75 | 63.64 |
| Zm00001d007968_P001 | Maize | cytosol | 51.75 | 63.64 |
| CDY40251 | Canola | cytosol | 60.31 | 63.27 |
| CDY61201 | Canola | cytosol | 66.15 | 62.5 |
| CDY42826 | Canola | cytosol | 65.37 | 61.99 |
| CDY48771 | Canola | cytosol | 42.02 | 59.34 |
| CDY20560 | Canola | cytosol | 60.31 | 58.05 |
| CDY61631 | Canola | cytosol | 68.09 | 53.35 |
| CDY24128 | Canola | cytosol | 67.7 | 53.05 |
| CDY52206 | Canola | mitochondrion | 39.69 | 51.78 |
| CDY56386 | Canola | mitochondrion | 39.69 | 51.78 |
| HORVU4Hr1G031770.1 | Barley | cytosol, plastid | 34.24 | 51.46 |
| CDX91673 | Canola | cytosol | 52.53 | 50.19 |
| Zm00001d018856_P001 | Maize | cytosol, plastid | 57.2 | 48.68 |
| CDX87464 | Canola | cytosol | 38.13 | 46.23 |
| CDX88428 | Canola | cytosol | 42.8 | 45.64 |
| CDX97014 | Canola | cytosol, plastid | 18.68 | 43.64 |
| CDY03135 | Canola | cytosol | 61.48 | 40.1 |
| Zm00001d039042_P001 | Maize | cytosol, nucleus, plasma membrane, plastid | 57.98 | 36.61 |
Protein Annotations
| Gene3D:1.20.190.20 | InterPro:14-3-3 | InterPro:14-3-3_CS | InterPro:14-3-3_dom_sf | InterPro:14-3-3_domain | MapMan:35.1 |
| GO:A0A078JY23 | UniProt:A0A078JY23 | EnsemblPlants:CDY71290 | ProteinID:CDY71290 | ProteinID:CDY71290.1 | ncoils:Coil |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0019904 | EnsemblPlantsGene:GSBRNA2T00013874001 | InterPro:IPR036815 |
| PFAM:PF00244 | PIRSF:PIRSF000868 | PRINTS:PR00305 | ScanProsite:PS00796 | ScanProsite:PS00797 | PANTHER:PTHR18860 |
| PANTHER:PTHR18860:SF26 | SMART:SM00101 | SUPFAM:SSF48445 | UniParc:UPI00018C7072 | : | : |
Description
BnaCnng72220DBnaCnng72220D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JY23]
Coordinates
chrLK045252:-:728..2431
Molecular Weight (calculated)
28893.0 Da
IEP (calculated)
4.445
GRAVY (calculated)
-0.445
Length
257 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSSREENVY MAKLAEQAER YEEMVEFMEK VAKSVDNEEL TVEERNLLSV AYKNVIGARR ASWRIISSIE QKEESKGNED HVAIIKDYRA KIEAELSKIC
101: DGILNVLEAH LIPSASPAES KVFYLKMKGD YHRYLAEFKA GNERKDAAES TLVAYKSAQD IATAELAPTH PIRLGLALNF SVFYYEILNS PDRACSLAKQ
201: AFDEAIAELD TLGEESYKDS TLIMQLLRDN LTLWTSDMTD EAGDEIKETS KPEGAAE
101: DGILNVLEAH LIPSASPAES KVFYLKMKGD YHRYLAEFKA GNERKDAAES TLVAYKSAQD IATAELAPTH PIRLGLALNF SVFYYEILNS PDRACSLAKQ
201: AFDEAIAELD TLGEESYKDS TLIMQLLRDN LTLWTSDMTD EAGDEIKETS KPEGAAE
001: MSTREENVYM AKLAEQAERY EEMVEFMEKV AKTVDVEELS VEERNLLSVA YKNVIGARRA SWRIISSIEQ KEESKGNEDH VAIIKDYRGK IESELSKICD
101: GILNVLEAHL IPSASPAESK VFYLKMKGDY HRYLAEFKAG AERKEAAEST LVAYKSASDI ATAELAPTHP IRLGLALNFS VFYYEILNSP DRACSLAKQA
201: FDDAIAELDT LGEESYKDST LIMQLLRDNL TLWTSDMTDE AGDEIKEASK PDGAE
101: GILNVLEAHL IPSASPAESK VFYLKMKGDY HRYLAEFKAG AERKEAAEST LVAYKSASDI ATAELAPTHP IRLGLALNFS VFYYEILNSP DRACSLAKQA
201: FDDAIAELDT LGEESYKDST LIMQLLRDNL TLWTSDMTDE AGDEIKEASK PDGAE
Arabidopsis Description
GRF3RCI1 [Source:UniProtKB/TrEMBL;Acc:A0A178UA42]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.