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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 2
  • cytosol 3
  • mitochondrion 1
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:nucleus
EpiLoc:cytosol
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:cytosol
plasma membrane: 18260611
nucleus: 23777608
plasma membrane: 27800704
plastid: 27992503
plasma membrane: 28056797
extracellular: 28232208
msms PMID: 23777608 doi
H Mujahid, F Tan, J Zhang, BR Nallamilli, K Pendarvis, Z Peng
Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, MS 39762, USA.
msms PMID: 27800704 doi
J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
msms PMID: 28056797 doi
N Yang, T Wang
Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.
msms PMID: 27992503 doi
S Xing, X Meng, L Zhou, H Mujahid, C Zhao, Y Zhang, C Wang, Z Peng
Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.
msms PMID: 18260611 doi
SH Natera, KL Ford, AM Cassin, JH Patterson, EJ Newbigin, A Bacic
Plant Cell Biology Research Centre, VIC, Australia. s.natera@unimelb.edu.au
msms PMID: 28232208 doi
Y Wang, R Gupta, W Song, HH Huh, SE Lee, J Wu, GK Agrawal, R Rakwal, KY Kang, SR Park, ST Kim
Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang 627-707, South Korea., Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang 627-707, South Korea. Electronic address: stkim71@pusan.ac.kr., Department of Plant Microbe Interactions, Max Planck Institute for Plant Breeding Research, Carl-von-Linneweg 10, Cologne 50829, Germany., Division of Applied Life Science (BK21 Program), Gyeongsang National University, Jinju, South Korea., National Academy of Agricultural Science, Rural Development Administration, Suwon 441-707, South Korea. Electronic address: srpark@korea.kr., Plant Proteomics Group, Max Planck Institute for Plant Breeding Research, Carl-von-Linneweg 10, Cologne 50829, Germany., Research Laboratory for Biotechnology and Biochemistry (RLABB), GPO 13265, Kathmandu 44600, Nepal; GRADE (Global Research Arch for Developing Education) Academy, Pvt. Ltd, Adarsh Nagar-13, Birgunj 44300, Nepal., Research Laboratory for Biotechnology and Biochemistry (RLABB), GPO 13265, Kathmandu 44600, Nepal; GRADE (Global Research Arch for Developing Education) Academy, Pvt. Ltd, Adarsh Nagar-13, Birgunj 44300, Nepal; Faculty of Health and Sport Sciences, Tsukuba International Academy for Sport Studies (TIAS), University of Tsukuba, 1-1-1 Tennodai, Tsukuba, 305-8574, Ibaraki, Japan.
PPI

Inferred distinct locusB in Crop

locusBlocations
Os08t0242900-01

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G38480.1 Os08t0242900-01 AT2G18876.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
OQU83613 Sorghum cytosol 93.21 92.86
TraesCS4D01G155900.1 Wheat plastid 92.08 91.73
Zm00001d053090_P001 Maize plastid 92.08 91.04
TraesCS4A01G151000.2 Wheat cytosol 92.08 90.37
TraesCS4B01G159900.1 Wheat cytosol 92.83 90.11
Zm00001d007446_P003 Maize cytosol 92.08 88.41
GSMUA_Achr9P28460_001 Banana cytosol 43.02 86.36
Os08t0430500-02 Rice plasma membrane 80.75 83.59
Os03t0710800-01 Rice nucleus, plasma membrane 81.13 82.69
CDX74252 Canola cytosol 81.13 82.38
KRH01783 Soybean nucleus 79.62 82.1
Bra040592.1-P Field mustard cytosol 80.75 81.99
CDY51543 Canola cytosol 80.75 81.99
Bra001049.1-P Field mustard cytosol 80.75 81.99
HORVU4Hr1G043300.1 Barley cytosol 92.45 81.67
CDY28698 Canola cytosol 80.38 81.61
Solyc03g034180.2.1 Tomato cytosol 79.25 81.4
CDX91996 Canola cytosol 80.0 81.23
Solyc02g063070.2.1 Tomato plastid 79.25 80.77
PGSC0003DMT400062153 Potato cytosol 79.25 80.77
VIT_14s0006g03230.t01 Wine grape cytosol 79.62 80.53
AT3G02520.2 Thale cress cytosol 80.38 80.38
Bra028409.1-P Field mustard cytosol 78.11 80.23
CDX74521 Canola cytosol 77.74 80.16
Os02t0580300-02 Rice plasma membrane 79.25 80.15
CDX67405 Canola cytosol 77.74 79.84
Bra028187.1-P Field mustard cytosol 77.36 79.77
CDY01659 Canola cytosol 77.36 79.77
Zm00001d048554_P001 Maize cytosol 59.25 79.7
CDY71290 Canola cytosol 76.6 78.99
AT5G38480.1 Thale cress cytosol 75.47 78.43
Os04t0462500-02 Rice cytosol 76.98 77.86
KRH46909 Soybean cytosol 76.23 77.69
PGSC0003DMT400050389 Potato cytosol 75.09 76.54
Os08t0480800-01 Rice plasma membrane 76.23 76.52
AT5G16050.2 Thale cress cytosol 77.36 76.49
Zm00001d021885_P001 Maize mitochondrion 47.55 76.36
Zm00001d033357_P001 Maize cytosol 58.11 73.68
Zm00001d007968_P001 Maize cytosol 57.36 72.73
Zm00001d017434_P001 Maize cytosol 57.36 72.73
HORVU4Hr1G031770.1 Barley cytosol, plastid 38.87 60.23
Os01t0209200-01 Rice cytosol, extracellular, nucleus 57.36 59.14
Zm00001d018856_P001 Maize cytosol, plastid 62.26 54.64
Zm00001d039042_P001 Maize cytosol, nucleus, plasma membrane, plastid 62.64 40.79
Os11t0609600-01 Rice cytosol 26.42 35.0
Protein Annotations
Gene3D:1.20.190.20InterPro:14-3-3InterPro:14-3-3_CSInterPro:14-3-3_dom_sfInterPro:14-3-3_domainMapMan:35.1
EntrezGene:4350697ProteinID:ABA94230.1EMBL:AK070548EMBL:AK101580ProteinID:BAF28430.2ProteinID:BAT14388.1
ncoils:CoilProteinID:EAZ18679.1GO:GO:0003674GO:GO:0005488GO:GO:0005515GO:GO:0019904
InterPro:IPR036815EnsemblPlantsGene:Os11g0546900EnsemblPlants:Os11t0546900-01PFAM:PF00244PIRSF:PIRSF000868PRINTS:PR00305
ScanProsite:PS00796ScanProsite:PS00797PANTHER:PTHR18860PANTHER:PTHR18860:SF34UniProt:Q2R2W2SMART:SM00101
SUPFAM:SSF48445EMBL:U65958UniParc:UPI00000AB4C9RefSeq:XP_015617058.1SEG:seg:
Description
G-BOX FACTOR 14-3-3D PROTEINSimilar to TaWIN1. (Os11t0546900-01)
Coordinates
chr11:+:20178469..20181426
Molecular Weight (calculated)
29263.2 Da
IEP (calculated)
4.551
GRAVY (calculated)
-0.499
Length
265 amino acids
Sequence
(BLAST)
001: MSPAEPTREE SVYKAKLAEQ AERYEEMVEY MERVARAAGG ASGGEELTVE ERNLLSVAYK NVIGARRASW RIISSIEQKE EGRGNDAHAA TIRSYRGKIE
101: AELARICDGI LALLDSHLVP SAGAAESKVF YLKMKGDYHR YLAEFKSGDE RKQAAESTMN AYKAAQDIAL ADLAPTHPIR LGLALNFSVF YYEILNSPDR
201: ACNLAKQAFD EAISELDSLG EESYKDSTLI MQLLRDNLTL WTSDANDDGG DEIKEAAAPK EPGDQ
Best Arabidopsis Sequence Match ( AT1G35160.1 )
(BLAST)
001: MAAPPASSSA REEFVYLAKL AEQAERYEEM VEFMEKVAEA VDKDELTVEE RNLLSVAYKN VIGARRASWR IISSIEQKEE SRGNDDHVTT IRDYRSKIES
101: ELSKICDGIL KLLDTRLVPA SANGDSKVFY LKMKGDYHRY LAEFKTGQER KDAAEHTLTA YKAAQDIANA ELAPTHPIRL GLALNFSVFY YEILNSPDRA
201: CNLAKQAFDE AIAELDTLGE ESYKDSTLIM QLLRDNLTLW TSDMQDESPE EIKEAAAPKP AEEQKEI
Arabidopsis Description
GF14 PHIGF14 protein phi chain [Source:UniProtKB/TrEMBL;Acc:F4HWQ5]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.