Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
- plasma membrane 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
plasma membrane:
18260611
nucleus: 23777608 plasma membrane: 27800704 plastid: 27992503 plasma membrane: 28056797 extracellular: 28232208 |
msms PMID:
23777608
doi
Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, MS 39762, USA.
msms PMID:
27800704
doi
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
msms PMID:
28056797
doi
Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.
msms PMID:
27992503
doi
Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.
msms PMID:
28232208
doi
Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang 627-707, South Korea., Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang 627-707, South Korea. Electronic address: stkim71@pusan.ac.kr., Department of Plant Microbe Interactions, Max Planck Institute for Plant Breeding Research, Carl-von-Linneweg 10, Cologne 50829, Germany., Division of Applied Life Science (BK21 Program), Gyeongsang National University, Jinju, South Korea., National Academy of Agricultural Science, Rural Development Administration, Suwon 441-707, South Korea. Electronic address: srpark@korea.kr., Plant Proteomics Group, Max Planck Institute for Plant Breeding Research, Carl-von-Linneweg 10, Cologne 50829, Germany., Research Laboratory for Biotechnology and Biochemistry (RLABB), GPO 13265, Kathmandu 44600, Nepal; GRADE (Global Research Arch for Developing Education) Academy, Pvt. Ltd, Adarsh Nagar-13, Birgunj 44300, Nepal., Research Laboratory for Biotechnology and Biochemistry (RLABB), GPO 13265, Kathmandu 44600, Nepal; GRADE (Global Research Arch for Developing Education) Academy, Pvt. Ltd, Adarsh Nagar-13, Birgunj 44300, Nepal; Faculty of Health and Sport Sciences, Tsukuba International Academy for Sport Studies (TIAS), University of Tsukuba, 1-1-1 Tennodai, Tsukuba, 305-8574, Ibaraki, Japan.
|
PPI
Inferred distinct locusB in Crop
locusB | locations |
---|---|
Os08t0242900-01 |
Inferred from Arabidopsis experimental PPI
Ath locusA | locusB | Ath locusB | Paper |
---|---|---|---|
AT5G38480.1 | Os08t0242900-01 | AT2G18876.1 | 21798944 |
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
OQU83613 | Sorghum | cytosol | 93.21 | 92.86 |
TraesCS4D01G155900.1 | Wheat | plastid | 92.08 | 91.73 |
Zm00001d053090_P001 | Maize | plastid | 92.08 | 91.04 |
TraesCS4A01G151000.2 | Wheat | cytosol | 92.08 | 90.37 |
TraesCS4B01G159900.1 | Wheat | cytosol | 92.83 | 90.11 |
Zm00001d007446_P003 | Maize | cytosol | 92.08 | 88.41 |
GSMUA_Achr9P28460_001 | Banana | cytosol | 43.02 | 86.36 |
Os08t0430500-02 | Rice | plasma membrane | 80.75 | 83.59 |
Os03t0710800-01 | Rice | nucleus, plasma membrane | 81.13 | 82.69 |
CDX74252 | Canola | cytosol | 81.13 | 82.38 |
KRH01783 | Soybean | nucleus | 79.62 | 82.1 |
Bra040592.1-P | Field mustard | cytosol | 80.75 | 81.99 |
CDY51543 | Canola | cytosol | 80.75 | 81.99 |
Bra001049.1-P | Field mustard | cytosol | 80.75 | 81.99 |
HORVU4Hr1G043300.1 | Barley | cytosol | 92.45 | 81.67 |
CDY28698 | Canola | cytosol | 80.38 | 81.61 |
Solyc03g034180.2.1 | Tomato | cytosol | 79.25 | 81.4 |
CDX91996 | Canola | cytosol | 80.0 | 81.23 |
Solyc02g063070.2.1 | Tomato | plastid | 79.25 | 80.77 |
PGSC0003DMT400062153 | Potato | cytosol | 79.25 | 80.77 |
VIT_14s0006g03230.t01 | Wine grape | cytosol | 79.62 | 80.53 |
AT3G02520.2 | Thale cress | cytosol | 80.38 | 80.38 |
Bra028409.1-P | Field mustard | cytosol | 78.11 | 80.23 |
CDX74521 | Canola | cytosol | 77.74 | 80.16 |
Os02t0580300-02 | Rice | plasma membrane | 79.25 | 80.15 |
CDX67405 | Canola | cytosol | 77.74 | 79.84 |
Bra028187.1-P | Field mustard | cytosol | 77.36 | 79.77 |
CDY01659 | Canola | cytosol | 77.36 | 79.77 |
Zm00001d048554_P001 | Maize | cytosol | 59.25 | 79.7 |
CDY71290 | Canola | cytosol | 76.6 | 78.99 |
AT5G38480.1 | Thale cress | cytosol | 75.47 | 78.43 |
Os04t0462500-02 | Rice | cytosol | 76.98 | 77.86 |
KRH46909 | Soybean | cytosol | 76.23 | 77.69 |
PGSC0003DMT400050389 | Potato | cytosol | 75.09 | 76.54 |
Os08t0480800-01 | Rice | plasma membrane | 76.23 | 76.52 |
AT5G16050.2 | Thale cress | cytosol | 77.36 | 76.49 |
Zm00001d021885_P001 | Maize | mitochondrion | 47.55 | 76.36 |
Zm00001d033357_P001 | Maize | cytosol | 58.11 | 73.68 |
Zm00001d007968_P001 | Maize | cytosol | 57.36 | 72.73 |
Zm00001d017434_P001 | Maize | cytosol | 57.36 | 72.73 |
HORVU4Hr1G031770.1 | Barley | cytosol, plastid | 38.87 | 60.23 |
Os01t0209200-01 | Rice | cytosol, extracellular, nucleus | 57.36 | 59.14 |
Zm00001d018856_P001 | Maize | cytosol, plastid | 62.26 | 54.64 |
Zm00001d039042_P001 | Maize | cytosol, nucleus, plasma membrane, plastid | 62.64 | 40.79 |
Os11t0609600-01 | Rice | cytosol | 26.42 | 35.0 |
Protein Annotations
Gene3D:1.20.190.20 | InterPro:14-3-3 | InterPro:14-3-3_CS | InterPro:14-3-3_dom_sf | InterPro:14-3-3_domain | MapMan:35.1 |
EntrezGene:4350697 | ProteinID:ABA94230.1 | EMBL:AK070548 | EMBL:AK101580 | ProteinID:BAF28430.2 | ProteinID:BAT14388.1 |
ncoils:Coil | ProteinID:EAZ18679.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0019904 |
InterPro:IPR036815 | EnsemblPlantsGene:Os11g0546900 | EnsemblPlants:Os11t0546900-01 | PFAM:PF00244 | PIRSF:PIRSF000868 | PRINTS:PR00305 |
ScanProsite:PS00796 | ScanProsite:PS00797 | PANTHER:PTHR18860 | PANTHER:PTHR18860:SF34 | UniProt:Q2R2W2 | SMART:SM00101 |
SUPFAM:SSF48445 | EMBL:U65958 | UniParc:UPI00000AB4C9 | RefSeq:XP_015617058.1 | SEG:seg | : |
Description
G-BOX FACTOR 14-3-3D PROTEINSimilar to TaWIN1. (Os11t0546900-01)
Coordinates
chr11:+:20178469..20181426
Molecular Weight (calculated)
29263.2 Da
IEP (calculated)
4.551
GRAVY (calculated)
-0.499
Length
265 amino acids
Sequence
(BLAST)
(BLAST)
001: MSPAEPTREE SVYKAKLAEQ AERYEEMVEY MERVARAAGG ASGGEELTVE ERNLLSVAYK NVIGARRASW RIISSIEQKE EGRGNDAHAA TIRSYRGKIE
101: AELARICDGI LALLDSHLVP SAGAAESKVF YLKMKGDYHR YLAEFKSGDE RKQAAESTMN AYKAAQDIAL ADLAPTHPIR LGLALNFSVF YYEILNSPDR
201: ACNLAKQAFD EAISELDSLG EESYKDSTLI MQLLRDNLTL WTSDANDDGG DEIKEAAAPK EPGDQ
101: AELARICDGI LALLDSHLVP SAGAAESKVF YLKMKGDYHR YLAEFKSGDE RKQAAESTMN AYKAAQDIAL ADLAPTHPIR LGLALNFSVF YYEILNSPDR
201: ACNLAKQAFD EAISELDSLG EESYKDSTLI MQLLRDNLTL WTSDANDDGG DEIKEAAAPK EPGDQ
001: MAAPPASSSA REEFVYLAKL AEQAERYEEM VEFMEKVAEA VDKDELTVEE RNLLSVAYKN VIGARRASWR IISSIEQKEE SRGNDDHVTT IRDYRSKIES
101: ELSKICDGIL KLLDTRLVPA SANGDSKVFY LKMKGDYHRY LAEFKTGQER KDAAEHTLTA YKAAQDIANA ELAPTHPIRL GLALNFSVFY YEILNSPDRA
201: CNLAKQAFDE AIAELDTLGE ESYKDSTLIM QLLRDNLTLW TSDMQDESPE EIKEAAAPKP AEEQKEI
101: ELSKICDGIL KLLDTRLVPA SANGDSKVFY LKMKGDYHRY LAEFKTGQER KDAAEHTLTA YKAAQDIANA ELAPTHPIRL GLALNFSVFY YEILNSPDRA
201: CNLAKQAFDE AIAELDTLGE ESYKDSTLIM QLLRDNLTLW TSDMQDESPE EIKEAAAPKP AEEQKEI
Arabidopsis Description
GF14 PHIGF14 protein phi chain [Source:UniProtKB/TrEMBL;Acc:F4HWQ5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.