Factsheet for Os08t0430500-02

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

plastid: 17189339
plasma membrane: 18260611
extracellular: 18986194
nucleus: 19621931
nucleus: 23777608
nucleus: 26035336
extracellular: 26072143
plasma membrane: 27800704
plastid: 27992503
plasma membrane: 28056797

msms PMID: 26072143 doi

B Du, Z Wei, Z Wang, X Wang, X Peng, B Du, R Chen, L Zhu, G He

State Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan, 430072, China., State Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan, 430072, China. Electronic address: gche@whu.edu.cn.

msms PMID: 23777608 doi

H Mujahid, F Tan, J Zhang, BR Nallamilli, K Pendarvis, Z Peng

Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, MS 39762, USA.

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 26035336 doi

M Li, X Yin, K Sakata, P Yang, S Komatsu

§Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan., †Key Laboratory of Plant Germplasm Enhancement and Specialty Agriculture, Wuhan Botanical Garden, Chinese Academy of Sciences, Wuhan 430074, China., ‡National Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan.

msms PMID: 28056797 doi

N Yang, T Wang

Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.

msms PMID: 27992503 doi

S Xing, X Meng, L Zhou, H Mujahid, C Zhao, Y Zhang, C Wang, Z Peng

Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.

msms PMID: 18260611 doi

SH Natera, KL Ford, AM Cassin, JH Patterson, EJ Newbigin, A Bacic

Plant Cell Biology Research Centre, VIC, Australia. s.natera@unimelb.edu.au

msms PMID: 17189339 doi

T Kleffmann, A von Zychlinski, D Russenberger, M Hirsch-Hoffmann, P Gehrig, W Gruissem, S Baginsky

Institute of Plant Sciences, Eidgenössische Technische Hochschule Zurich, 8092 Zurich, Switzerland.

msms PMID: 19621931 doi

T Aki, S Yanagisawa

Department of Applied Biological Chemistry, The University of Tokyo, Japan.

msms PMID: 18986194 doi

YH Jung, SH Jeong, SH Kim, R Singh, JE Lee, YS Cho, GK Agrawal, R Rakwal, NS Jwa

Department of Molecular Biology, Sejong University, Gunja-dong, Seoul 143-747, South Korea.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU80487	Sorghum	cytosol	96.48	96.48
Zm00001d050375_P001	Maize	cytosol	95.31	95.31
EES15274	Sorghum	cytosol	93.75	94.86
Zm00001d032231_P001	Maize	cytosol	93.36	93.36
Zm00001d031688_P001	Maize	cytosol, extracellular, mitochondrion	91.41	91.05
Zm00001d038649_P002	Maize	cytosol	90.23	89.88
Zm00001d036226_P001	Maize	cytosol	89.06	88.72
Zm00001d052698_P001	Maize	plasma membrane	85.94	87.3
Os02t0580300-02	Rice	plasma membrane	89.06	87.02
Os04t0462500-02	Rice	cytosol	88.28	86.26
Os03t0710800-01	Rice	nucleus, plasma membrane	87.11	85.77
Os11t0546900-01	Rice	plasma membrane	83.59	80.75
Os08t0480800-01	Rice	plasma membrane	76.56	74.24
Os01t0209200-01	Rice	cytosol, extracellular, nucleus	60.94	60.7
Zm00001d034593_P001	Maize	cytosol	72.27	57.63
Os11t0609600-01	Rice	cytosol	26.56	34.0

Protein Annotations

Gene3D:1.20.190.20	InterPro:14-3-3	InterPro:14-3-3_CS	InterPro:14-3-3_dom_sf	InterPro:14-3-3_domain	MapMan:35.1
PDB:3AXY	EntrezGene:4345634	EMBL:AF451190	EMBL:AK065266	EMBL:AK122149	EMBL:AK243044
ProteinID:BAD01170.1	ProteinID:BAF23770.1	ProteinID:BAT05544.1	ncoils:Coil	ProteinID:EAZ42820.1	EMBL:EU847025
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0005737	GO:GO:0019904	InterPro:IPR036815	EnsemblPlantsGene:Os08g0430500	EnsemblPlants:Os08t0430500-02
PFAM:PF00244	PIRSF:PIRSF000868	PRINTS:PR00305	ScanProsite:PS00796	ScanProsite:PS00797	PANTHER:PTHR18860
PANTHER:PTHR18860:SF36	UniProt:Q0J5J5	UniProt:Q6ZKC0	SMART:SM00101	SUPFAM:SSF48445	EMBL:U65957
UniParc:UPI00000A1E4B	RefSeq:XP_015650299.1	:	:	:	:

Description

G-BOX FACTOR 14-3-3C PROTEIN14-3-3 protein, Florigen receptor, Flowering (Os08t0430500-01);Similar to 14-3-3-like protein S94. (Os08t0430500-02);Similar to 14-3-3-like protein GF14-C. (Os08t0430500-03)

Coordinates

chr8:-:20812607..20815511

Molecular Weight (calculated)

28828.0 Da

IEP (calculated)

4.489

GRAVY (calculated)

-0.446

Length

256 amino acids

Sequence
(BLAST)

001: MSREENVYMA KLAEQAERYE EMVEYMEKVA KTVDVEELTV EERNLLSVAY KNVIGARRAS WRIVSSIEQK EEGRGNEEHV TLIKEYRGKI EAELSKICDG
101: ILKLLDSHLV PSSTAAESKV FYLKMKGDYH RYLAEFKTGA ERKEAAESTM VAYKAAQDIA LADLAPTHPI RLGLALNFSV FYYEILNSPD KACNLAKQAF
201: DEAISELDTL GEESYKDSTL IMQLLRDNLT LWTSDLTEDG GDEVKEASKG DACEGQ

Best Arabidopsis Sequence Match ( AT3G02520.2 )
(BLAST)

001: MSSSREENVY LAKLAEQAER YEEMVEFMEK VAKTVDTDEL TVEERNLLSV AYKNVIGARR ASWRIISSIE QKEESRGNDD HVSIIKDYRG KIETELSKIC
101: DGILNLLDSH LVPTASLAES KVFYLKMKGD YHRYLAEFKT GAERKEAAES TLVAYKSAQD IALADLAPTH PIRLGLALNF SVFYYEILNS PDRACSLAKQ
201: AFDEAISELD TLGEESYKDS TLIMQLLRDN LTLWNSDIND EAGGDEIKEA SKHEPEEGKP AETGQ

Arabidopsis Description

GRF714-3-3-like protein GF14 nu [Source:UniProtKB/Swiss-Prot;Acc:Q96300]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.