Factsheet for Zm00001d053090_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

extracellular: 20408568
plastid: 23198870
plasma membrane: 23353019
mitochondrion: 27297264

msms PMID: 23353019 doi

D Hopff, S Wienkoop, S Lüthje

University of Hamburg, Biocenter Klein Flottbek and Botanical Garden, Plant Physiology, Ohnhorststraße 18, D-22609 Hamburg, Germany.

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

msms PMID: 23198870 doi

M Huang, G Friso, K Nishimura, X Qu, PD Olinares, W Majeran, Q Sun, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, United States.

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d050216_P003

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G38480.1	Zm00001d050216_P003	AT2G18876.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU83613	Sorghum	cytosol	97.39	98.12
Zm00001d007446_P003	Maize	cytosol	97.39	94.57
TraesCS4D01G155900.1	Wheat	plastid	91.42	92.11
Os11t0546900-01	Rice	plasma membrane	91.04	92.08
TraesCS4A01G151000.2	Wheat	cytosol	91.42	90.74
TraesCS4B01G159900.1	Wheat	cytosol	92.16	90.48
GSMUA_Achr9P28460_001	Banana	cytosol	44.03	89.39
Solyc03g034180.2.1	Tomato	cytosol	79.85	82.95
Bra040592.1-P	Field mustard	cytosol	80.6	82.76
CDY51543	Canola	cytosol	80.6	82.76
Bra001049.1-P	Field mustard	cytosol	80.6	82.76
Zm00001d048554_P001	Maize	cytosol	60.82	82.74
HORVU4Hr1G043300.1	Barley	cytosol	92.54	82.67
KRH01783	Soybean	nucleus	79.1	82.49
CDX74252	Canola	cytosol	80.22	82.38
CDY28698	Canola	cytosol	80.22	82.38
VIT_14s0006g03230.t01	Wine grape	cytosol	80.22	82.06
Zm00001d050375_P001	Maize	cytosol	78.36	82.03
CDX91996	Canola	cytosol	79.48	81.61
PGSC0003DMT400062153	Potato	cytosol	79.1	81.54
Bra028409.1-P	Field mustard	cytosol	78.36	81.4
Zm00001d032231_P001	Maize	cytosol	77.61	81.25
Zm00001d021885_P001	Maize	mitochondrion	50.0	81.21
Solyc02g063070.2.1	Tomato	plastid	78.73	81.15
CDX67405	Canola	cytosol	77.99	81.01
Zm00001d025617_P006	Maize	cytosol	78.73	80.84
AT3G02520.2	Thale cress	cytosol	79.85	80.75
CDY71290	Canola	cytosol	77.24	80.54
AT5G38480.1	Thale cress	cytosol	76.49	80.39
CDX74521	Canola	cytosol	76.87	80.16
CDY01659	Canola	cytosol	76.49	79.77
Bra028187.1-P	Field mustard	cytosol	76.12	79.38
Zm00001d031688_P001	Maize	cytosol, extracellular, mitochondrion	75.37	78.6
KRH46909	Soybean	cytosol	76.12	78.46
PGSC0003DMT400050389	Potato	cytosol	75.75	78.08
Zm00001d033357_P001	Maize	cytosol	60.82	77.99
Zm00001d038649_P002	Maize	cytosol	74.25	77.43
Zm00001d003401_P003	Maize	cytosol	78.36	77.21
Zm00001d007968_P001	Maize	cytosol	60.07	77.03
Zm00001d017434_P001	Maize	cytosol	60.07	77.03
Zm00001d052698_P001	Maize	plasma membrane	72.39	76.98
Zm00001d036226_P001	Maize	cytosol	73.51	76.65
AT5G16050.2	Thale cress	cytosol	76.12	76.12
Zm00001d052796_P003	Maize	cytosol	73.13	72.86
Zm00001d006462_P001	Maize	cytosol	37.69	67.79
HORVU4Hr1G031770.1	Barley	cytosol, plastid	39.18	61.4
Zm00001d013429_P001	Maize	extracellular	25.0	57.76
Zm00001d018856_P001	Maize	cytosol, plastid	64.55	57.28
Zm00001d034593_P001	Maize	cytosol	64.93	54.21
Zm00001d028091_P001	Maize	cytosol	32.46	49.43
Zm00001d039042_P001	Maize	cytosol, nucleus, plasma membrane, plastid	64.93	42.75
Zm00001d015779_P001	Maize	nucleus	24.63	37.08
Zm00001d035316_P001	Maize	cytosol	18.28	32.89
Zm00001d048868_P002	Maize	extracellular	48.88	30.54

Protein Annotations

Gene3D:1.20.190.20	EntrezGene:100273134	InterPro:14-3-3	InterPro:14-3-3_CS	InterPro:14-3-3_dom_sf	InterPro:14-3-3_domain
MapMan:35.1	ProteinID:AQK58688.1	ncoils:Coil	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0019904	InterPro:IPR036815	UniProt:K7U5A5	PFAM:PF00244	PIRSF:PIRSF000868	PRINTS:PR00305
ScanProsite:PS00796	ScanProsite:PS00797	PANTHER:PTHR18860	PANTHER:PTHR18860:SF34	SMART:SM00101	SUPFAM:SSF48445
UniParc:UPI00018C70A6	EnsemblPlantsGene:Zm00001d053090	EnsemblPlants:Zm00001d053090_P001	EnsemblPlants:Zm00001d053090_T001	SEG:seg	:

Description

14-3-3-like protein

Coordinates

chr4:+:213265064..213268433

Molecular Weight (calculated)

29544.6 Da

IEP (calculated)

4.509

GRAVY (calculated)

-0.448

Length

268 amino acids

Sequence
(BLAST)

001: MSPSEPTREE SVYMAKLAEQ AERYEEMVEF MERVARYAGG AGGGDELSVE ERNLLSVAYK NVIGARRASW RIISSIEQKE EGRGNEAHAA SIRAYRSKIE
101: AELARICDGI LALLDSHLVP SAGGAESKVF YLKMKGDYHR YLAEFKSGAE RKDAAESTMN AYKAAQDIAL ADLAPTHPIR LGLALNFSVF YYEILNSPDR
201: ACNLAKQAFD EAISELDSLG EESYKDSTLI MQLLRDNLTL WTSDTNEDAG DEIKEAAAAP KESAPEGQ

Best Arabidopsis Sequence Match ( AT1G35160.1 )
(BLAST)

001: MAAPPASSSA REEFVYLAKL AEQAERYEEM VEFMEKVAEA VDKDELTVEE RNLLSVAYKN VIGARRASWR IISSIEQKEE SRGNDDHVTT IRDYRSKIES
101: ELSKICDGIL KLLDTRLVPA SANGDSKVFY LKMKGDYHRY LAEFKTGQER KDAAEHTLTA YKAAQDIANA ELAPTHPIRL GLALNFSVFY YEILNSPDRA
201: CNLAKQAFDE AIAELDTLGE ESYKDSTLIM QLLRDNLTLW TSDMQDESPE EIKEAAAPKP AEEQKEI

Arabidopsis Description

GF14 PHIGF14 protein phi chain [Source:UniProtKB/TrEMBL;Acc:F4HWQ5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.