Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY46646 | Canola | cytosol | 98.08 | 98.08 |
| Bra012325.1-P | Field mustard | cytosol | 97.31 | 96.2 |
| CDY41483 | Canola | cytosol | 90.38 | 90.73 |
| CDX91676 | Canola | cytosol | 89.23 | 89.58 |
| AT1G78300.1 | Thale cress | cytosol | 82.31 | 82.63 |
| CDX68022 | Canola | cytosol | 81.92 | 81.92 |
| CDX79255 | Canola | cytosol | 81.92 | 81.92 |
| CDX88436 | Canola | cytosol | 81.15 | 81.15 |
| CDY14618 | Canola | cytosol | 80.38 | 80.38 |
| PGSC0003DMT400060654 | Potato | cytosol | 77.31 | 78.82 |
| Solyc04g012120.2.1 | Tomato | extracellular, nucleus | 76.92 | 78.43 |
| CDY12024 | Canola | cytosol | 78.08 | 77.78 |
| PGSC0003DMT400041810 | Potato | cytosol | 76.92 | 77.52 |
| CDY28408 | Canola | cytosol | 76.92 | 76.05 |
| CDY71290 | Canola | cytosol | 75.0 | 75.88 |
| CDX67405 | Canola | cytosol | 75.0 | 75.58 |
| CDX74521 | Canola | cytosol | 74.62 | 75.49 |
| CDY01659 | Canola | cytosol | 74.62 | 75.49 |
| CDY51543 | Canola | cytosol | 75.77 | 75.48 |
| CDY28698 | Canola | cytosol | 75.77 | 75.48 |
| CDX73313 | Canola | cytosol | 76.92 | 75.47 |
| CDX74252 | Canola | cytosol | 74.62 | 74.33 |
| CDX91996 | Canola | cytosol | 73.85 | 73.56 |
| Solyc11g010200.1.1 | Tomato | nucleus | 73.46 | 71.0 |
| CDY08794 | Canola | cytosol | 67.69 | 70.97 |
| CDY14562 | Canola | cytosol | 67.69 | 70.97 |
| CDX85759 | Canola | cytosol | 67.69 | 70.97 |
| CDY40098 | Canola | cytosol | 67.69 | 70.97 |
| CDX87455 | Canola | cytosol | 81.54 | 70.9 |
| CDY54716 | Canola | cytosol | 67.69 | 70.68 |
| CDX78381 | Canola | cytosol | 67.69 | 70.4 |
| CDX81287 | Canola | cytosol | 67.31 | 70.28 |
| CDX81179 | Canola | cytosol | 67.31 | 70.0 |
| CDX97016 | Canola | cytosol | 58.08 | 66.23 |
| CDY69181 | Canola | cytosol | 61.92 | 63.64 |
| CDY38227 | Canola | cytosol | 61.54 | 63.24 |
| CDY16161 | Canola | cytosol | 63.08 | 60.97 |
| CDX85023 | Canola | cytosol | 63.08 | 60.74 |
| CDY61201 | Canola | cytosol | 61.92 | 59.19 |
| CDY40251 | Canola | cytosol | 55.77 | 59.18 |
| CDY42826 | Canola | cytosol | 61.54 | 59.04 |
| Zm00001d013429_P001 | Maize | extracellular | 25.38 | 56.9 |
| CDY48771 | Canola | cytosol | 38.46 | 54.95 |
| CDY20560 | Canola | cytosol | 55.38 | 53.93 |
| KRH05108 | Soybean | cytosol | 31.54 | 51.57 |
| CDY61631 | Canola | cytosol | 63.08 | 50.0 |
| CDY24128 | Canola | cytosol | 62.69 | 49.7 |
| CDY56386 | Canola | mitochondrion | 37.31 | 49.24 |
| CDY52206 | Canola | mitochondrion | 37.31 | 49.24 |
| CDX91673 | Canola | cytosol | 48.85 | 47.21 |
| CDX87464 | Canola | cytosol | 38.46 | 47.17 |
| CDX88428 | Canola | cytosol | 43.08 | 46.47 |
| CDX97014 | Canola | cytosol, plastid | 19.23 | 45.45 |
| GSMUA_Achr3P17880_001 | Banana | cytosol | 28.85 | 42.61 |
| CDY03135 | Canola | cytosol | 58.85 | 38.83 |
| VIT_00s0199g00140.t01 | Wine grape | cytosol | 51.92 | 23.24 |
Protein Annotations
| Gene3D:1.20.190.20 | InterPro:14-3-3 | InterPro:14-3-3_CS | InterPro:14-3-3_dom_sf | InterPro:14-3-3_domain | MapMan:35.1 |
| GO:A0A078EH63 | EnsemblPlants:CDY00447 | ProteinID:CDY00447 | ProteinID:CDY00447.1 | ncoils:Coil | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0019904 | EnsemblPlantsGene:GSBRNA2T00110103001 | InterPro:IPR036815 | PFAM:PF00244 |
| PIRSF:PIRSF000868 | PRINTS:PR00305 | ScanProsite:PS00797 | PANTHER:PTHR18860 | PANTHER:PTHR18860:SF26 | SMART:SM00101 |
| SUPFAM:SSF48445 | UniParc:UPI00019D3448 | SEG:seg | : | : | : |
Description
BnaC07g13790D
Coordinates
chrLK031918:+:1169172..1170789
Molecular Weight (calculated)
29144.4 Da
IEP (calculated)
4.455
GRAVY (calculated)
-0.430
Length
260 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVPSREDLV YMAKLAEQAE RYEEMVQYME KVSAATDGSE LTIEERNLLS VAYKNLIGAR RASWRIISSI EQKEESRGNV ERVKTIRDYK AKIESELSGI
101: CDGILKLLDS TLVPSAASEE SKVFYLKMKG DYYRYLAEFK IGKERDAAAD NTLAAYESAQ DNAKGLASTH PIRLGLALNF SVFYYEILES PDRACNLAKT
201: AFDAAIAELD TLGEESYKDS TLIMQLLRDN LTLWTSDMQD ESADEIKEAA AAPKPTEEQK
101: CDGILKLLDS TLVPSAASEE SKVFYLKMKG DYYRYLAEFK IGKERDAAAD NTLAAYESAQ DNAKGLASTH PIRLGLALNF SVFYYEILES PDRACNLAKT
201: AFDAAIAELD TLGEESYKDS TLIMQLLRDN LTLWTSDMQD ESADEIKEAA AAPKPTEEQK
001: MAAPPASSSA REEFVYLAKL AEQAERYEEM VEFMEKVAEA VDKDELTVEE RNLLSVAYKN VIGARRASWR IISSIEQKEE SRGNDDHVTT IRDYRSKIES
101: ELSKICDGIL KLLDTRLVPA SANGDSKVFY LKMKGDYHRY LAEFKTGQER KDAAEHTLTA YKAAQDIANA ELAPTHPIRL GLALNFSVFY YEILNSPDRA
201: CNLAKQAFDE AIAELDTLGE ESYKDSTLIM QLLRDNLTLW TSDMQDESPE EIKEAAAPKP AEEQKEI
101: ELSKICDGIL KLLDTRLVPA SANGDSKVFY LKMKGDYHRY LAEFKTGQER KDAAEHTLTA YKAAQDIANA ELAPTHPIRL GLALNFSVFY YEILNSPDRA
201: CNLAKQAFDE AIAELDTLGE ESYKDSTLIM QLLRDNLTLW TSDMQDESPE EIKEAAAPKP AEEQKEI
Arabidopsis Description
GF14 PHIGF14 protein phi chain [Source:UniProtKB/TrEMBL;Acc:F4HWQ5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.