CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
CDY03902
CDY15726
CDY66858
CDY68583

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G24280.1	CDY03902	AT1G24280.1	21798944
AT1G24280.1	CDY15726	AT1G24280.1	21798944
AT1G24280.1	CDY66858	AT1G24280.1	21798944
AT1G24280.1	CDY68583	AT1G24280.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY15726	Canola	plastid	92.56	93.19
CDY66858	Canola	plastid	85.45	86.18
Bra030031.1-P	Field mustard	plastid	84.26	84.98
AT1G24280.1	Thale cress	plastid	83.42	82.3
CDY68583	Canola	plastid	61.08	82.23
CDY72674	Canola	endoplasmic reticulum	52.79	80.62
CDX69669	Canola	plastid	81.39	80.3
GSMUA_Achr6P16590_001	Banana	cytosol	71.91	79.74
VIT_01s0146g00060.t01	Wine grape	plastid	76.82	77.61
CDX97227	Canola	endoplasmic reticulum	81.73	77.28
CDX78507	Canola	endoplasmic reticulum	82.4	76.81
Solyc05g015950.2.1	Tomato	plastid	74.79	75.81
PGSC0003DMT400028015	Potato	plastid	73.94	75.09
KRH01562	Soybean	endoplasmic reticulum, nucleus, plastid	75.47	74.21
KRH70548	Soybean	nucleus, plastid	75.13	73.75
Os07t0406300-02	Rice	plastid	72.42	72.79
EES10513	Sorghum	plastid	73.27	72.65
TraesCS2A01G067800.1	Wheat	mitochondrion	72.25	72.62
GSMUA_Achr10P...	Banana	plastid	72.76	72.27
TraesCS2B01G080000.1	Wheat	plastid	71.74	71.26
TraesCS2D01G066100.1	Wheat	plastid	70.73	70.61
CDY65677	Canola	plastid	67.17	69.77
CDY69162	Canola	plastid	67.01	69.47
HORVU2Hr1G010520.37	Barley	cytosol, plasma membrane	70.56	64.06
CDY32178	Canola	plastid	46.7	46.86
CDY31093	Canola	plastid	46.7	44.3
CDX83677	Canola	cytosol	35.19	39.92
CDY00159	Canola	cytosol	35.19	39.77
CDY20053	Canola	cytosol	34.35	39.42
CDX67476	Canola	cytosol	34.86	39.31
CDY11711	Canola	cytosol	35.19	39.1
CDY13701	Canola	cytosol	34.69	38.68
Zm00001d017760_P001	Maize	cytosol	7.78	37.1
Zm00001d025288_P001	Maize	cytosol	7.45	36.97

Protein Annotations

KEGG:00030+1.1.1.49	KEGG:00480+1.1.1.49	Gene3D:3.30.360.10	Gene3D:3.40.50.720	MapMan:3.9.1.1	GO:A0A078ES77
EnsemblPlants:CDY03902	ProteinID:CDY03902	ProteinID:CDY03902.1	InterPro:G6P_DH	InterPro:G6P_DH_AS	InterPro:G6P_DH_C
InterPro:G6P_DH_NAD-bd	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004345	GO:GO:0005488
GO:GO:0005975	GO:GO:0006006	GO:GO:0008150	GO:GO:0008152	GO:GO:0050661	GO:GO:0055114
EnsemblPlantsGene:GSBRNA2T00117390001	HAMAP:MF_00966	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00479	PFAM:PF02781	PRINTS:PR00079
ScanProsite:PS00069	PANTHER:PTHR23429	PANTHER:PTHR23429:SF3	MetaCyc:PWY-7268	SUPFAM:SSF51735	SUPFAM:SSF55347
TIGRFAMs:TIGR00871	UniPathway:UPA00115	UniParc:UPI0004EBC55B	SEG:seg	:	:

Description

BnaC07g11270D

Coordinates

chrLK031947:-:699373..702391

Molecular Weight (calculated)

66360.0 Da

IEP (calculated)

7.665

GRAVY (calculated)

-0.374

Length

591 amino acids

Sequence
(BLAST)

001: MSSFSTSLSS RTSSSSPFLS NHSSLINSDP SRRSLSFPQG INLDDLCVRS KRKLVQSSVA VGDGAVITKS SSPELKGGPL SIPSQEAEDK LVIESNGGKE
101: HSTVSITVVG ASGDLAKKKI FPALFALYYE GCLPEHFTIY GYARSKMTDA ELRDMVSKTL TCRIDKRENC GEKMEEFLKR CFYHTGQYDS QEHFVALDKK
201: LKEHEGGRLS NRLFYLSIPP NIFVDAVKCA SSSASSSSGW TRVIVEKPFG RDSKTSAALT KSLKQYLEED QIFRIDHYLG KELVENLSVL RFSNLIFEPL
301: WSRQYIQNVQ FIFSEDFGTE GRGGYFDHYG IIRDIMQNHL LQILALFAME TPVSLDAEDI RNEKVKVLRS MRPIQLEDVV IGQYKSTTKG GVTYPGYTDD
401: KTVPKDSLTP TFAAAALFID NARWDGVPFL MKAGKALHTR SAEIRVQFRH VPGNLYNRNS GGTNLDRTTN ELVIRVQPDE GIYLKINNKV PGLGMRLDQS
501: HLNLLYSARY SKEIPDAYER LLLDAIEGER RLFIRSDELD AAWALFTPLL KEIEEKKTIP EFYPHGSRGP VGAHYLAAKH NVQWGDLSLD Q

Best Arabidopsis Sequence Match ( AT1G24280.1 )
(BLAST)

001: MSSLSCPTYR SRTSSSSPFL SNHHHSSLIN VVDPRRSLSF HYASPQGLNL AELCVVRSQR RSVQSSVVVQ DGSVATESSS SEEAKDVGVL TIPSLEADKV
101: VAESDGGEQL STVSITVVGA SGDLAKKKIF PALFALYYEG CLPEHFTIFG YARSKMTDAE LRVMVSKTLT CRIDKRANCG EKMEEFLKRC FYHSGQYDSQ
201: EHFVALDEKL KEHEGGRLSN RLFYLSIPPN IFVDAVKCAS SSASSVNGWT RVIVEKPFGR DSKTSAALTK SLKQYLEEDQ IFRIDHYLGK ELVENLSVLR
301: FSNLIFEPLW SRQYIRNVQF IFSEDFGTEG RGGYFDNYGI IRDIMQNHLL QILALFAMET PVSLDAEDIR NEKVKVLRSM RPIKLEDVVI GQYKSHSIGG
401: VTYPSYTDDK TVPKGSLTPT FAAAALFIDN ARWDGVPFLM KAGKALNTRS AEIRVQFRHV PGNLYNRNSG TDRDQTTNEL VIRVQPDEAI YLKINNKVPG
501: LGMRLDQSNL NLLYSARYSK EIPDAYERLL LDAIEGERRL FIRSDELDAA WALFTPLLKE IEEKKTTPEF YPYGSRGPVG AHYLAAKHKV QWGDLSLDQ

Arabidopsis Description

G6PD3Glucose-6-phosphate 1-dehydrogenase [Source:UniProtKB/TrEMBL;Acc:A0A178WP00]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.