Factsheet for PGSC0003DMT400028015

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 11

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
PGSC0003DMT400028015

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G24280.1	PGSC0003DMT400028015	AT1G24280.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc05g015950.2.1	Tomato	plastid	86.94	86.79
GSMUA_Achr6P16590_001	Banana	cytosol	73.2	79.92
VIT_01s0146g00060.t01	Wine grape	plastid	79.55	79.15
Bra010958.1-P	Field mustard	plastid	75.77	75.26
AT5G13110.1	Thale cress	plastid	76.98	75.17
CDY66858	Canola	plastid	75.6	75.09
CDY15726	Canola	plastid	75.26	74.62
GSMUA_Achr10P...	Banana	plastid	76.12	74.45
Bra030031.1-P	Field mustard	plastid	74.91	74.4
CDX69669	Canola	plastid	76.29	74.12
CDY03902	Canola	plastid	75.09	73.94
Bra008855.1-P	Field mustard	plastid	75.94	73.91
Os07t0406300-02	Rice	plastid	74.23	73.47
KRH01562	Soybean	endoplasmic reticulum, nucleus, plastid	74.57	72.21
AT1G24280.1	Thale cress	plastid	73.88	71.79
KRH70548	Soybean	nucleus, plastid	74.23	71.76
EES10513	Sorghum	plastid	73.37	71.64
CDY68583	Canola	plastid	53.78	71.3
TraesCS2D01G066100.1	Wheat	plastid	72.51	71.28
TraesCS2A01G067800.1	Wheat	mitochondrion	71.82	71.09
PGSC0003DMT400044818	Potato	plastid	70.45	71.06
CDX97227	Canola	endoplasmic reticulum	75.94	70.72
CDX78507	Canola	endoplasmic reticulum	76.63	70.35
TraesCS2B01G080000.1	Wheat	plastid	71.65	70.08
HORVU2Hr1G010520.37	Barley	cytosol, plasma membrane	70.96	63.44
PGSC0003DMT400007105	Potato	plastid	42.61	41.61
PGSC0003DMT400052250	Potato	cytosol	35.57	40.51
Zm00001d017760_P001	Maize	cytosol	8.08	37.9
Zm00001d025288_P001	Maize	cytosol	7.56	36.97

Protein Annotations

KEGG:00030+1.1.1.49	KEGG:00480+1.1.1.49	Gene3D:3.30.360.10	Gene3D:3.40.50.720	MapMan:3.9.1.1	EMBL:AB061255
EMBL:AJ010712	ProteinID:BAC23041	ProteinID:BAC23041.1	ProteinID:CAB52708	ProteinID:CAB52708.1	InterPro:G6P_DH
InterPro:G6P_DH_AS	InterPro:G6P_DH_C	InterPro:G6P_DH_NAD-bd	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004345	GO:GO:0005488	GO:GO:0005975	GO:GO:0006006	GO:GO:0006098	GO:GO:0006139
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016491	GO:GO:0050661	GO:GO:0055114
UniProt:M1AQJ3	HAMAP:MF_00966	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00479	PFAM:PF02781	EnsemblPlantsGene:PGSC0003DMG400010802
PGSC:PGSC0003DMG400010802	EnsemblPlants:PGSC0003DMT400028015	PIRSF:PIRSF000110	PRINTS:PR00079	ScanProsite:PS00069	PANTHER:PTHR23429
PANTHER:PTHR23429:SF3	SUPFAM:SSF51735	SUPFAM:SSF55347	TIGRFAMs:TIGR00871	UniParc:UPI0002967BD2	:

Description

Glucose-6-phosphate 1-dehydrogenase [Source:PGSC_GENE;Acc:PGSC0003DMG400010802]

Coordinates

chr5:+:15763422..15768243

Molecular Weight (calculated)

66216.9 Da

IEP (calculated)

8.629

GRAVY (calculated)

-0.400

Length

582 amino acids

Sequence
(BLAST)

001: MVTLYSSPST NCSGVFSSYS NSSIGFYNYH NNFPISSRKF GSHKISLQIN AIRMQDGAVV AQPSKTQDET PLKKLKDGIL SKEQKHTFDF DSNKDKSTVS
101: ITVVGASGDL AKKKIFPALF ALYYEGCLPE HFTIFGYARS KMTDDELRNM VSKTLTCRID KRENCGEKME QFLERCFYHS GQYDSQENFA ELDKKLKEHE
201: AGRFSNRLFY LSIPPNIFIN AVRCASLSAS SAHGWTRVIV EKPFGRDSES SAALTGALKQ YLKEDQIFRI DHYLGKELVE NLSVLRFSNL IFEPLWSRQY
301: IRNVQFIFSE DFGTEGRGGY FDHYGIIRDI MQNHLLQILA LFAMETPVSL DAEDIRNEKV KVLRSMRPLQ LDDVIVGQYK SHTKGGVNYP GYTDDKTVPK
401: DSLTPTFAAA ALFIDNARWD GVPFLMKAGK ALHTRSAEIR VQFRHVPGNL YNKNFGSDLD QATNELVIRV QPDEAIYLKI NNKVPGLGMR LDRSNLNLLY
501: SARYSKEIPD AYERLLLDAI EGERRLFIRS DELDAAWSLF TPVLKDLEHK KIVPESYPYG SRGPIGAHYL AARYKVRWGD LA

Best Arabidopsis Sequence Match ( AT5G13110.1 )
(BLAST)

001: MAALSSSVTT RSYHSGYLAS FSPVNGDRHR SLSFLSASPQ GLNPLDLCVR FQRKSGRASV FMQDGAIVTN SNSSESKTSL KGLKDEVLSA LSQEAAKVGV
101: ESDGQSQSTV SITVVGASGD LAKKKIFPAL FALYYEGCLP EHFTIFGYSR SKMTDVELRN MVSKTLTCRI DKRANCGEKM EEFLKRCFYH SGQYDSQEHF
201: TELDKKLKEH EAGRISNRLF YLSIPPNIFV DAVKCASTSA SSVNGWTRVI VEKPFGRDSE TSAALTKSLK QYLEEDQIFR IDHYLGKELV ENLSVLRFSN
301: LIFEPLWSRQ YIRNVQFIFS EDFGTEGRGG YFDNYGIIRD IMQNHLLQIL ALFAMETPVS LDAEDIRNEK VKVLRSMRPI RVEDVVIGQY KSHTKGGVTY
401: PAYTDDKTVP KGSLTPTFAA AALFIDNARW DGVPFLMKAG KALHTRSAEI RVQFRHVPGN LYNRNTGSDL DQATNELVIR VQPDEAIYLK INNKVPGLGM
501: RLDRSNLNLL YSARYSKEIP DAYERLLLDA IEGERRLFIR SDELDAAWSL FTPLLKEIEE KKRIPEYYPY GSRGPVGAHY LAAKHKVQWG DVSIDQ

Arabidopsis Description

G6PD2Glucose-6-phosphate 1-dehydrogenase 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9FY99]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.