Factsheet for Zm00001d017760_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 3
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d017760_P001
Zm00001d025288_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G24280.1	Zm00001d017760_P001	AT1G24280.1	21798944
AT1G24280.1	Zm00001d025288_P001	AT1G24280.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d025288_P001	Maize	cytosol	37.1	38.66
Zm00001d003252_P003	Maize	cytosol	35.48	8.68
Zm00001d017119_P003	Maize	peroxisome	35.48	8.51
CDY68583	Canola	plastid	29.03	8.2
PGSC0003DMT400028015	Potato	plastid	37.9	8.08
Solyc05g015950.2.1	Tomato	plastid	37.9	8.06
VIT_01s0146g00060.t01	Wine grape	plastid	37.9	8.03
KRH01562	Soybean	endoplasmic reticulum, nucleus, plastid	38.71	7.99
KRH70548	Soybean	nucleus, plastid	38.71	7.97
AT5G13110.1	Thale cress	plastid	37.9	7.89
CDY66858	Canola	plastid	37.1	7.85
Bra010958.1-P	Field mustard	plastid	37.1	7.85
AT1G24280.1	Thale cress	plastid	37.9	7.85
CDY15726	Canola	plastid	37.1	7.84
CDY03902	Canola	plastid	37.1	7.78
Bra030031.1-P	Field mustard	plastid	36.29	7.68
Zm00001d029502_P001	Maize	plastid	39.52	7.64
CDX69669	Canola	plastid	36.29	7.51
Bra008855.1-P	Field mustard	plastid	35.48	7.36
CDX97227	Canola	endoplasmic reticulum	36.29	7.2
CDX78507	Canola	endoplasmic reticulum	35.48	6.94
Zm00001d015288_P001	Maize	plastid	10.48	6.47
Zm00001d025015_P002	Maize	plastid	32.26	6.14
Zm00001d047587_P005	Maize	nucleus	43.55	5.91

Protein Annotations

KEGG:00030+1.1.1.49	KEGG:00480+1.1.1.49	Gene3D:3.30.360.10	MapMan:35.2	UniProt:A0A1D6HHG6	ProteinID:AQK73976.1
InterPro:G6P_DH	InterPro:G6P_DH_C	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004345
GO:GO:0005488	GO:GO:0005975	GO:GO:0006006	GO:GO:0008150	GO:GO:0008152	GO:GO:0050661
GO:GO:0055114	PFAM:PF02781	PRINTS:PR00079	PANTHER:PTHR23429	PANTHER:PTHR23429:SF4	SUPFAM:SSF55347
UniParc:UPI00084388D3	EnsemblPlantsGene:Zm00001d017760	EnsemblPlants:Zm00001d017760_P001	EnsemblPlants:Zm00001d017760_T001	:	:

Description

Glucose-6-phosphate 1-dehydrogenase 4 chloroplastic

Coordinates

chr5:+:206033223..206034191

Molecular Weight (calculated)

14622.2 Da

IEP (calculated)

9.400

GRAVY (calculated)

-1.013

Length

124 amino acids

Sequence
(BLAST)

001: MGLMTNRYFG NYGIIRDIVH NHILQTIALF AMEPPVSLDG EDIRDEKGEG SQINSESDMN RVGQSRCARY PNMHRNRKRE GNVQFGKFGQ RDEYPNLIYR
101: DVPYHFLKDS KNHPSNRRAY RWCN

Best Arabidopsis Sequence Match ( AT1G09420.2 )
(BLAST)

001: MSLSSCLLPF SQSATAPSSS VCSCHLAASF SNFPVSSRDY SFSRSGSLVL NGGGSNLCRR FCGLKLWILK SLNRRQGNNR KHQPVNELTT HSKHTFLSDD
101: ERGFAEETRA EDLRPEENIL GTDLNDGFHN VGDLPPVSKQ LSDDLSDVRR RASLCIAVVG ATGELARGKI FPALFALYYS GYLPEDVAIF GVSRKNLTDE
201: DLRSIIASTL TCRVDHQENC GGKMDAFQSR TYYINGGYNN RDGMSRLAER MKQIEGESEA NRIFYLSVPQ EALVDVACTI GDNAQAPRGW TRIIVEKPFG
301: FNSHSSHQLT KSLLSKFEEK QIYRIDHMLG RNLIENLTVL RFSNLVFEPL WNRTYIRNIQ VIISESIAQT EKFSDGYGII RDIVHSHILQ TIALLAMEPP
401: ISLDGEDIRN EKVNLYCKEQ NRLMVLRSIR KIDPRDVILG QYKSSSRDKN GVILNGVDPT YCAAALYIDN ARWDGVPFLV RVGTGLIKHR VEIHVQFRHV
501: PGNLYRENIG INIDLGTNEL ILRDEPDEAI LVKINNKVPG LGLQLDASEL NLLYKDRYKT EVPDSYEHLI HDVIDGDNHL FMRSDEVAAA WNILSPVLEE
601: IDKHHTAPEL YEFGGRGPVA AYYLWAKHGV PWADD

Arabidopsis Description

G6PD4Glucose-6-phosphate 1-dehydrogenase [Source:UniProtKB/TrEMBL;Acc:F4I0Y8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.