CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 5
endoplasmic reticulum 7
vacuole 5
plasma membrane 5
golgi 5
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra008855.1-P	Field mustard	plastid	90.56	94.65
CDX69669	Canola	plastid	89.44	93.32
AT5G13110.1	Thale cress	plastid	86.24	90.44
CDX78507	Canola	endoplasmic reticulum	85.12	83.91
CDY15726	Canola	plastid	77.28	82.28
CDY03902	Canola	plastid	77.28	81.73
CDY72674	Canola	endoplasmic reticulum	50.4	81.4
CDY66858	Canola	plastid	76.0	81.06
GSMUA_Achr6P16590_001	Banana	cytosol	68.8	80.68
VIT_01s0146g00060.t01	Wine grape	plastid	73.6	78.63
CDY68583	Canola	plastid	54.72	77.9
Solyc05g015950.2.1	Tomato	plastid	71.36	76.5
PGSC0003DMT400028015	Potato	plastid	70.72	75.94
KRH70548	Soybean	nucleus, plastid	72.0	74.75
KRH01562	Soybean	endoplasmic reticulum, nucleus, plastid	71.84	74.71
EES10513	Sorghum	plastid	70.08	73.49
Os07t0406300-02	Rice	plastid	69.12	73.47
TraesCS2A01G067800.1	Wheat	mitochondrion	68.96	73.3
GSMUA_Achr10P...	Banana	plastid	69.6	73.11
TraesCS2B01G080000.1	Wheat	plastid	67.84	71.26
CDY65677	Canola	plastid	64.64	71.0
TraesCS2D01G066100.1	Wheat	plastid	67.04	70.78
CDY69162	Canola	plastid	64.48	70.7
HORVU2Hr1G010520.37	Barley	cytosol, plasma membrane	66.56	63.9
CDY32178	Canola	plastid	43.36	46.01
CDY31093	Canola	plastid	43.36	43.5
CDX83677	Canola	cytosol	33.6	40.31
CDX67476	Canola	cytosol	33.76	40.27
CDY00159	Canola	cytosol	33.6	40.15
CDY11711	Canola	cytosol	33.92	39.85
CDY20053	Canola	cytosol	32.8	39.81
CDY13701	Canola	cytosol	33.28	39.25
Zm00001d025288_P001	Maize	cytosol	7.04	36.97
Zm00001d017760_P001	Maize	cytosol	7.2	36.29

Protein Annotations

KEGG:00030+1.1.1.49	KEGG:00480+1.1.1.49	Gene3D:3.30.360.10	Gene3D:3.40.50.720	MapMan:3.9.1.1	GO:A0A078E854
EnsemblPlants:CDX97227	ProteinID:CDX97227	ProteinID:CDX97227.1	InterPro:G6P_DH	InterPro:G6P_DH_AS	InterPro:G6P_DH_C
InterPro:G6P_DH_NAD-bd	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004345	GO:GO:0005488
GO:GO:0005975	GO:GO:0006006	GO:GO:0008150	GO:GO:0008152	GO:GO:0050661	GO:GO:0055114
EnsemblPlantsGene:GSBRNA2T00104230001	HAMAP:MF_00966	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00479	PFAM:PF02781	PRINTS:PR00079
ScanProsite:PS00069	PANTHER:PTHR23429	PANTHER:PTHR23429:SF3	MetaCyc:PWY-7268	SUPFAM:SSF51735	SUPFAM:SSF55347
TIGRFAMs:TIGR00871	UniPathway:UPA00115	UniParc:UPI0004EEDAC7	SEG:seg	:	:

Description

BnaC09g43980D

Coordinates

chrLK031897:+:1281247..1283949

Molecular Weight (calculated)

70734.5 Da

IEP (calculated)

8.615

GRAVY (calculated)

-0.317

Length

625 amino acids

Sequence
(BLAST)

001: MFLMFCLLNQ NLLFLIAPYL VVRLNLTMAS LSSSVTSRSY RSGYLGSFSP LKGSNRQRPL SFLSASPRGL SSHELCVRFQ RNSTRSSVFM QDGAIVTNSN
101: STESASSLKG FKEEVLSVLS QEAAKVGEGS DGQSQSTVSI TVVGASGDLA KKKIFPALFA LYYEDCLPEH FTIFGYSRSK MTDAELRNMV SKTLTCRIDK
201: RANCGEKMEE FLKRCFYHSG QYDSQEHFTE LDKKLKEHEA GRMSNRLFYL SIPPNIFVDA VKCASSSASS VNGWTRVIVE KPFGRDSETS AALTNSLKQY
301: LEEDQIFRID HYLGKELVEN LSVLRFSNLI FEPLWSRQYI RNVQFIFSED FGTEGRGGYF DHYGIIRDIM QNHLLQILAL FAMETPVSLD AEDIRNEKVK
401: VLRSMRPIQV EDVVIGQYKS HTKGGVTYPG YTDDKTVPKG SLTPTFAAAA LFIDNARWDG VPFLMKAGKA LHTRRAEIRV QFRHVPGNLY NRNNTGCDLD
501: KATNELVIRV QPDEAIYLKV NNKVPGLGMR LDRSNLNLLY SARYSKEIPD AYERLLLDAI EGERRLFIRS DELDAAWSLF TPLLKEIEEK KRIPEYYPYG
601: SRGPVGAHYL AAKHKVQWGD ISLDQ

Best Arabidopsis Sequence Match ( AT5G13110.1 )
(BLAST)

001: MAALSSSVTT RSYHSGYLAS FSPVNGDRHR SLSFLSASPQ GLNPLDLCVR FQRKSGRASV FMQDGAIVTN SNSSESKTSL KGLKDEVLSA LSQEAAKVGV
101: ESDGQSQSTV SITVVGASGD LAKKKIFPAL FALYYEGCLP EHFTIFGYSR SKMTDVELRN MVSKTLTCRI DKRANCGEKM EEFLKRCFYH SGQYDSQEHF
201: TELDKKLKEH EAGRISNRLF YLSIPPNIFV DAVKCASTSA SSVNGWTRVI VEKPFGRDSE TSAALTKSLK QYLEEDQIFR IDHYLGKELV ENLSVLRFSN
301: LIFEPLWSRQ YIRNVQFIFS EDFGTEGRGG YFDNYGIIRD IMQNHLLQIL ALFAMETPVS LDAEDIRNEK VKVLRSMRPI RVEDVVIGQY KSHTKGGVTY
401: PAYTDDKTVP KGSLTPTFAA AALFIDNARW DGVPFLMKAG KALHTRSAEI RVQFRHVPGN LYNRNTGSDL DQATNELVIR VQPDEAIYLK INNKVPGLGM
501: RLDRSNLNLL YSARYSKEIP DAYERLLLDA IEGERRLFIR SDELDAAWSL FTPLLKEIEE KKRIPEYYPY GSRGPVGAHY LAAKHKVQWG DVSIDQ

Arabidopsis Description

G6PD2Glucose-6-phosphate 1-dehydrogenase 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9FY99]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.