Factsheet for Os07t0406300-02

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 4

Predictors

GFP

MS/MS

Papers

peroxisome: 21309870

plastid: 17189339
plasma membrane: 27800704

gfp PMID: 21309870 doi

T Meyer, C Hölscher, C Schwöppe, A von Schaewen

Institut für Biologie und Biotechnologie der Pflanzen, Westfälische Wilhelms-Universität Münster, Schlossgarten 3, 48149 Münster, Germany.

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 17189339 doi

T Kleffmann, A von Zychlinski, D Russenberger, M Hirsch-Hoffmann, P Gehrig, W Gruissem, S Baginsky

Institute of Plant Sciences, Eidgenössische Technische Hochschule Zurich, 8092 Zurich, Switzerland.

PPI

Inferred distinct locusB in Crop

locusB	locations
Os07t0406300-02

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G24280.1	Os07t0406300-02	AT1G24280.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P16590_001	Banana	cytosol	75.0	82.74
TraesCS2D01G066100.1	Wheat	plastid	82.31	81.76
EES10513	Sorghum	plastid	82.82	81.71
TraesCS2B01G080000.1	Wheat	plastid	81.12	80.17
TraesCS2A01G067800.1	Wheat	mitochondrion	79.42	79.42
Zm00001d025015_P002	Maize	plastid	85.88	77.57
GSMUA_Achr10P...	Banana	plastid	77.21	76.3
VIT_01s0146g00060.t01	Wine grape	plastid	75.85	76.24
PGSC0003DMT400028015	Potato	plastid	73.47	74.23
Solyc05g015950.2.1	Tomato	plastid	72.96	73.58
Bra030031.1-P	Field mustard	plastid	73.13	73.38
CDY15726	Canola	plastid	73.13	73.25
AT5G13110.1	Thale cress	plastid	73.98	72.99
KRH70548	Soybean	nucleus, plastid	74.32	72.59
CDX69669	Canola	plastid	73.81	72.45
CDY03902	Canola	plastid	72.79	72.42
Bra008855.1-P	Field mustard	plastid	73.47	72.24
KRH01562	Soybean	endoplasmic reticulum, nucleus, plastid	73.81	72.21
CDY66858	Canola	plastid	71.77	72.01
Bra010958.1-P	Field mustard	plastid	71.6	71.84
AT1G24280.1	Thale cress	plastid	72.62	71.29
HORVU2Hr1G010520.37	Barley	cytosol, plasma membrane	77.04	69.59
CDX78507	Canola	endoplasmic reticulum	75.0	69.56
Os03t0412800-01	Rice	plastid	67.86	69.15
CDX97227	Canola	endoplasmic reticulum	73.47	69.12
CDY68583	Canola	plastid	50.17	67.2
Os03t0318500-01	Rice	plastid	46.94	43.88
Os04t0485300-01	Rice	cytosol, mitochondrion, plastid	34.35	40.0
Os02t0600400-01	Rice	golgi, plasma membrane	34.52	39.27

Protein Annotations

KEGG:00030+1.1.1.49	KEGG:00480+1.1.1.49	Gene3D:3.30.360.10	Gene3D:3.40.50.720	MapMan:3.9.1.1	EntrezGene:4342988
EMBL:AK064867	ProteinID:BAC84352.1	ProteinID:BAF21344.1	ProteinID:BAT01091.1	InterPro:G6P_DH	InterPro:G6P_DH_AS
InterPro:G6P_DH_C	InterPro:G6P_DH_NAD-bd	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004345
GO:GO:0005488	GO:GO:0005975	GO:GO:0006006	GO:GO:0006098	GO:GO:0006139	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016491	GO:GO:0050661	GO:GO:0055114	HAMAP:MF_00966
InterPro:NAD(P)-bd_dom_sf	EnsemblPlantsGene:Os07g0406300	EnsemblPlants:Os07t0406300-02	PFAM:PF00479	PFAM:PF02781	PIRSF:PIRSF000110
PRINTS:PR00079	ScanProsite:PS00069	PANTHER:PTHR23429	PANTHER:PTHR23429:SF3	UniProt:Q7EYK9	SUPFAM:SSF51735
SUPFAM:SSF55347	TIGRFAMs:TIGR00871	UniParc:UPI00001BF673	RefSeq:XP_015647088.1	SEG:seg	:

Description

d-glucose 6-phosphate dehydrogenase 3, Glucose-6-phosphate dehydrogenase 2, plastidic G6PDHSimilar to Glucose-6-phosphate 1-dehydrogenase. (Os07t0406300-01);Similar to Glucose-6-phosphate 1-dehydrogenase precursor (EC 1.1.1.49). (Os07t0406300-02)

Coordinates

chr7:-:12544349..12550054

Molecular Weight (calculated)

66056.0 Da

IEP (calculated)

8.341

GRAVY (calculated)

-0.336

Length

588 amino acids

Sequence
(BLAST)

001: MALSCMRCSP AAGAVRRGLA SAAPPAALSF ARCGLRRAAA LGWRVAAVTT TGVQGAKDAG LEKAARSASQ SKVENGSPSE IILDDFEDLS PLSENDDSTV
101: SITVVGASGD LAKKKIFPAL FALYYEDCLP KHFTIFGYAR SKMTDAELRN MVSKTLTCRI DKRENCNEKM EEFLKRCFYH SGQYDSEEHF MDLDKKLKQH
201: EGSRVSNRLF YLSIPPNIFL DVVKCASKSA SSGNGWTRVI VEKPFGRDSD SSSALTRGLK QYLVEDQIFR IDHYLGKELV ENLSVLRFSN LVFEPLWSRQ
301: YIRNVQLIFS EDFGTEGRGG YFDRYGIIRD IMQNHLLQIL ALFAMETPVS LEAEDIRNEK VKVLRSMKPL QLEDVVIGQY KSHTKGGTTY PGYTEDKTVP
401: KDSVTPTFAA AALFINNARW DGVPFLMKAG KALHTKGAEI RVQFRHVPGN LYKRSFGTDL DTATNELVIR VQPDEAIYLK INNKIPGLGM RLDRSNLNLH
501: YAARYSKEIP DAYERLLLDA IEGERRLFIR SDELDAAWEL FTPLLKELEE KRIAPELYPY GSRGPVGAHY LAAKYNVRWG DLTTEQKA

Best Arabidopsis Sequence Match ( AT5G13110.1 )
(BLAST)

001: MAALSSSVTT RSYHSGYLAS FSPVNGDRHR SLSFLSASPQ GLNPLDLCVR FQRKSGRASV FMQDGAIVTN SNSSESKTSL KGLKDEVLSA LSQEAAKVGV
101: ESDGQSQSTV SITVVGASGD LAKKKIFPAL FALYYEGCLP EHFTIFGYSR SKMTDVELRN MVSKTLTCRI DKRANCGEKM EEFLKRCFYH SGQYDSQEHF
201: TELDKKLKEH EAGRISNRLF YLSIPPNIFV DAVKCASTSA SSVNGWTRVI VEKPFGRDSE TSAALTKSLK QYLEEDQIFR IDHYLGKELV ENLSVLRFSN
301: LIFEPLWSRQ YIRNVQFIFS EDFGTEGRGG YFDNYGIIRD IMQNHLLQIL ALFAMETPVS LDAEDIRNEK VKVLRSMRPI RVEDVVIGQY KSHTKGGVTY
401: PAYTDDKTVP KGSLTPTFAA AALFIDNARW DGVPFLMKAG KALHTRSAEI RVQFRHVPGN LYNRNTGSDL DQATNELVIR VQPDEAIYLK INNKVPGLGM
501: RLDRSNLNLL YSARYSKEIP DAYERLLLDA IEGERRLFIR SDELDAAWSL FTPLLKEIEE KKRIPEYYPY GSRGPVGAHY LAAKHKVQWG DVSIDQ

Arabidopsis Description

G6PD2Glucose-6-phosphate 1-dehydrogenase 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9FY99]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.