CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

nucleus 1
plastid 2
endoplasmic reticulum 3
mitochondrion 1
extracellular 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT5G13110.1	Thale cress	plastid	86.44	91.95
CDX69669	Canola	plastid	85.65	90.65
CDX97227	Canola	endoplasmic reticulum	83.91	85.12
CDY15726	Canola	plastid	77.44	83.65
CDY03902	Canola	plastid	76.81	82.4
CDY72674	Canola	endoplasmic reticulum	49.53	81.14
GSMUA_Achr6P16590_001	Banana	cytosol	67.67	80.49
CDY66858	Canola	plastid	74.29	80.38
VIT_01s0146g00060.t01	Wine grape	plastid	72.4	78.46
CDY68583	Canola	plastid	53.63	77.45
Solyc05g015950.2.1	Tomato	plastid	70.82	77.02
PGSC0003DMT400028015	Potato	plastid	70.35	76.63
Os07t0406300-02	Rice	plastid	69.56	75.0
KRH01562	Soybean	endoplasmic reticulum, nucleus, plastid	70.19	74.04
TraesCS2A01G067800.1	Wheat	mitochondrion	68.61	73.98
EES10513	Sorghum	plastid	69.4	73.83
KRH70548	Soybean	nucleus, plastid	70.03	73.75
GSMUA_Achr10P...	Banana	plastid	67.82	72.27
TraesCS2B01G080000.1	Wheat	plastid	66.88	71.26
TraesCS2D01G066100.1	Wheat	plastid	66.09	70.78
CDY65677	Canola	plastid	62.62	69.77
CDY69162	Canola	plastid	62.46	69.47
HORVU2Hr1G010520.37	Barley	cytosol, plasma membrane	65.46	63.75
CDY32178	Canola	plastid	42.43	45.67
CDY31093	Canola	plastid	42.74	43.5
CDX83677	Canola	cytosol	32.65	39.73
CDY00159	Canola	cytosol	32.65	39.58
CDX67476	Canola	cytosol	32.49	39.31
CDY20053	Canola	cytosol	31.86	39.22
CDY11711	Canola	cytosol	32.81	39.1
CDY13701	Canola	cytosol	32.33	38.68
Zm00001d025288_P001	Maize	cytosol	6.78	36.13
Zm00001d017760_P001	Maize	cytosol	6.94	35.48

Protein Annotations

KEGG:00030+1.1.1.49	KEGG:00480+1.1.1.49	Gene3D:3.30.360.10	Gene3D:3.40.50.720	MapMan:3.9.1.1	GO:A0A078CP42
EnsemblPlants:CDX78507	ProteinID:CDX78507	ProteinID:CDX78507.1	InterPro:G6P_DH	InterPro:G6P_DH_AS	InterPro:G6P_DH_C
InterPro:G6P_DH_NAD-bd	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004345	GO:GO:0005488
GO:GO:0005975	GO:GO:0006006	GO:GO:0008150	GO:GO:0008152	GO:GO:0050661	GO:GO:0055114
EnsemblPlantsGene:GSBRNA2T00129907001	HAMAP:MF_00966	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00479	PFAM:PF02781	PRINTS:PR00079
ScanProsite:PS00069	PANTHER:PTHR23429	PANTHER:PTHR23429:SF3	MetaCyc:PWY-7268	SUPFAM:SSF51735	SUPFAM:SSF55347
TIGRFAMs:TIGR00871	UniPathway:UPA00115	UniParc:UPI0004EE2906	SEG:seg	:	:

Description

BnaA03g04190D

Coordinates

chrLK031815:+:1049529..1052446

Molecular Weight (calculated)

71675.6 Da

IEP (calculated)

8.405

GRAVY (calculated)

-0.357

Length

634 amino acids

Sequence
(BLAST)

001: MEQTKRENGT PFTLPYPLTV VGGVNLWEIS KVVVLLMMAS LSSSVTSRSY RSGYSASLSP VNGIRHRSLS FLSASPQGLK VHELCVRFQR KSGRSSVFMQ
101: DGAIVANSDS TESTKSSLKG LKDEVLSVLS EEAAKVGSES DGQSQSTVSI TVVGASGDLA KKKIFPALFA LYYEDCLPEH FTIYGYSRSK MTDVELRNMV
201: SKTLTCRIDK RANCGEKMEE FLKRCFYHSG QYDSQEHFTE LDKKLKEHEA GRISNRLFYL SIPPNIFVDA VKCASSSASS VNGWTRVIVE KPFGRDSETS
301: AALTKSLKQY LEEDQIFRID HYLGKELVEN LSVLRFSNLI FEPLWSRQYI RNVQFIFSED FGTEGRGGYF DHYGIIRDIM QNHLLQILAL FAMETPVSLD
401: AEDIRNEKVK VLRSMRPIQM EDVVIGQYKS HTKGGVTHPG YTDDKTVPKD SLTPTFAAAA LFIDNARWDG VPFLMKAGKA LHTRRAEIRV QFRHVPGNLY
501: NRNTGCDLDK ATNELVIRVQ PDEAIYLKIN NKVPGLGMRL DRSNLNLLYS ARYSKEIPDA YERLLLDAIE GERRLFIRSD ELDAAWSLFT PLLKEIEEKR
601: RIPEYYPYGS RGPVGAHYLA AKHKVQWGDM SLDQ

Best Arabidopsis Sequence Match ( AT5G13110.1 )
(BLAST)

001: MAALSSSVTT RSYHSGYLAS FSPVNGDRHR SLSFLSASPQ GLNPLDLCVR FQRKSGRASV FMQDGAIVTN SNSSESKTSL KGLKDEVLSA LSQEAAKVGV
101: ESDGQSQSTV SITVVGASGD LAKKKIFPAL FALYYEGCLP EHFTIFGYSR SKMTDVELRN MVSKTLTCRI DKRANCGEKM EEFLKRCFYH SGQYDSQEHF
201: TELDKKLKEH EAGRISNRLF YLSIPPNIFV DAVKCASTSA SSVNGWTRVI VEKPFGRDSE TSAALTKSLK QYLEEDQIFR IDHYLGKELV ENLSVLRFSN
301: LIFEPLWSRQ YIRNVQFIFS EDFGTEGRGG YFDNYGIIRD IMQNHLLQIL ALFAMETPVS LDAEDIRNEK VKVLRSMRPI RVEDVVIGQY KSHTKGGVTY
401: PAYTDDKTVP KGSLTPTFAA AALFIDNARW DGVPFLMKAG KALHTRSAEI RVQFRHVPGN LYNRNTGSDL DQATNELVIR VQPDEAIYLK INNKVPGLGM
501: RLDRSNLNLL YSARYSKEIP DAYERLLLDA IEGERRLFIR SDELDAAWSL FTPLLKEIEE KKRIPEYYPY GSRGPVGAHY LAAKHKVQWG DVSIDQ

Arabidopsis Description

G6PD2Glucose-6-phosphate 1-dehydrogenase 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9FY99]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.