Factsheet for TraesCS2D01G066100.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS2A01G067800.1
TraesCS2B01G080000.1
TraesCS2D01G066100.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G24280.1	TraesCS2A01G067800.1	AT1G24280.1	21798944
AT1G24280.1	TraesCS2B01G080000.1	AT1G24280.1	21798944
AT1G24280.1	TraesCS2D01G066100.1	AT1G24280.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G067800.1	Wheat	mitochondrion	87.84	88.44
TraesCS2B01G080000.1	Wheat	plastid	88.85	88.4
Os07t0406300-02	Rice	plastid	81.76	82.31
GSMUA_Achr6P16590_001	Banana	cytosol	72.47	80.49
EES10513	Sorghum	plastid	79.73	79.19
HORVU2Hr1G010520.37	Barley	cytosol, plasma membrane	83.95	76.34
GSMUA_Achr10P...	Banana	plastid	76.18	75.8
Zm00001d025015_P002	Maize	plastid	81.08	73.73
VIT_01s0146g00060.t01	Wine grape	plastid	72.8	73.68
Bra030031.1-P	Field mustard	plastid	71.79	72.53
PGSC0003DMT400028015	Potato	plastid	71.28	72.51
CDY15726	Canola	plastid	71.28	71.89
Solyc05g015950.2.1	Tomato	plastid	70.44	71.53
KRH01562	Soybean	endoplasmic reticulum, nucleus, plastid	72.47	71.38
CDY66858	Canola	plastid	70.44	71.16
Bra010958.1-P	Field mustard	plastid	70.27	70.99
AT5G13110.1	Thale cress	plastid	71.45	70.97
KRH70548	Soybean	nucleus, plastid	72.13	70.93
CDY03902	Canola	plastid	70.61	70.73
Bra008855.1-P	Field mustard	plastid	70.61	69.9
CDX69669	Canola	plastid	70.61	69.78
AT1G24280.1	Thale cress	plastid	70.44	69.62
TraesCS6D01G135800.2	Wheat	plastid	66.72	68.82
CDX97227	Canola	endoplasmic reticulum	70.78	67.04
CDX78507	Canola	endoplasmic reticulum	70.78	66.09
CDY68583	Canola	plastid	48.82	65.83
TraesCS4D01G180300.2	Wheat	plastid	45.61	43.41
TraesCS6D01G195700.1	Wheat	peroxisome	33.78	38.68

Protein Annotations

KEGG:00030+1.1.1.49	KEGG:00480+1.1.1.49	Gene3D:3.30.360.10	Gene3D:3.40.50.720	MapMan:3.9.1.1	InterPro:G6P_DH
InterPro:G6P_DH_AS	InterPro:G6P_DH_C	InterPro:G6P_DH_NAD-bd	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004345	GO:GO:0005488	GO:GO:0005975	GO:GO:0006006	GO:GO:0008150	GO:GO:0008152
GO:GO:0050661	GO:GO:0055114	HAMAP:MF_00966	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00479	PFAM:PF02781
PRINTS:PR00079	ScanProsite:PS00069	PANTHER:PTHR23429	PANTHER:PTHR23429:SF3	SUPFAM:SSF51735	SUPFAM:SSF55347
TIGRFAMs:TIGR00871	EnsemblPlantsGene:TraesCS2D01G066100	EnsemblPlants:TraesCS2D01G066100.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr2D:-:27924984..27929560

Molecular Weight (calculated)

65795.9 Da

IEP (calculated)

8.345

GRAVY (calculated)

-0.277

Length

592 amino acids

Sequence
(BLAST)

001: MALSCMRCPA AVGGGHAAAR RPAATPPSSS LAFSLARCGG RSAAAASGWR IDAVAGKGVK APMDAAENAV APAAPSTVPN GTSSAIIMEE FEDFAALAKD
101: DEASVSITVV GASGDLAKKK IFPALFALYY EGCLPKHFSI FGYARSKMTD AELRDMVSKT LTCRIDKREN CSEKMEEFLK RCFYHSGQYD SEEDFKELGK
201: KIKQHEGPRV SNHLFYLSIP PNIFLDVVKC ASKSASSVSG WTRVIVEKPF GRDSESSAAL TKGLKQYLTE DQIFRIDHYL GKELVENLSV LRFSNLVFEP
301: LWSRQYIRNV QLIFSEDFGT EGRGGYFDSY GIIRDIMQNH LLQILALFAM ETPISLEAED IRNEKVKVLR SMKPLRLEDV VIGQYKSHTK GGITYPGYTE
401: DKTVPKGSLT PTFAAAALFI NNARWDGVPF LMKAGKALHT KQAEIRVQFR HVPGNLYKGS FGTDLDRATN ELVIRVQPDE GIYLKINNKI PGLGMRLDRS
501: NLNLHYAARY PKEIPDAYER LLLDAIEGER RLFIRSDELD AAWELFTPLL KELEQKRMAP ELYPYGSRGP VGAHYLAAKY NVRWGDLGGS EH

Best Arabidopsis Sequence Match ( AT5G13110.1 )
(BLAST)

001: MAALSSSVTT RSYHSGYLAS FSPVNGDRHR SLSFLSASPQ GLNPLDLCVR FQRKSGRASV FMQDGAIVTN SNSSESKTSL KGLKDEVLSA LSQEAAKVGV
101: ESDGQSQSTV SITVVGASGD LAKKKIFPAL FALYYEGCLP EHFTIFGYSR SKMTDVELRN MVSKTLTCRI DKRANCGEKM EEFLKRCFYH SGQYDSQEHF
201: TELDKKLKEH EAGRISNRLF YLSIPPNIFV DAVKCASTSA SSVNGWTRVI VEKPFGRDSE TSAALTKSLK QYLEEDQIFR IDHYLGKELV ENLSVLRFSN
301: LIFEPLWSRQ YIRNVQFIFS EDFGTEGRGG YFDNYGIIRD IMQNHLLQIL ALFAMETPVS LDAEDIRNEK VKVLRSMRPI RVEDVVIGQY KSHTKGGVTY
401: PAYTDDKTVP KGSLTPTFAA AALFIDNARW DGVPFLMKAG KALHTRSAEI RVQFRHVPGN LYNRNTGSDL DQATNELVIR VQPDEAIYLK INNKVPGLGM
501: RLDRSNLNLL YSARYSKEIP DAYERLLLDA IEGERRLFIR SDELDAAWSL FTPLLKEIEE KKRIPEYYPY GSRGPVGAHY LAAKHKVQWG DVSIDQ

Arabidopsis Description

G6PD2Glucose-6-phosphate 1-dehydrogenase 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9FY99]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.