CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
CDY03902
CDY15726
CDY66858
CDY68583

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G24280.1	CDY03902	AT1G24280.1	21798944
AT1G24280.1	CDY15726	AT1G24280.1	21798944
AT1G24280.1	CDY66858	AT1G24280.1	21798944
AT1G24280.1	CDY68583	AT1G24280.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra010958.1-P	Field mustard	plastid	99.32	99.32
CDY68583	Canola	plastid	72.35	96.58
CDY15726	Canola	plastid	85.67	85.52
CDY03902	Canola	plastid	86.18	85.45
CDY72674	Canola	endoplasmic reticulum	53.41	80.88
AT1G24280.1	Thale cress	plastid	81.4	79.63
CDX69669	Canola	plastid	81.06	79.3
GSMUA_Achr6P16590_001	Banana	cytosol	72.01	79.17
VIT_01s0146g00060.t01	Wine grape	plastid	76.96	77.09
CDX97227	Canola	endoplasmic reticulum	81.06	76.0
Solyc05g015950.2.1	Tomato	plastid	75.6	75.99
PGSC0003DMT400028015	Potato	plastid	75.09	75.6
CDX78507	Canola	endoplasmic reticulum	80.38	74.29
KRH01562	Soybean	endoplasmic reticulum, nucleus, plastid	75.77	73.88
KRH70548	Soybean	nucleus, plastid	75.6	73.59
TraesCS2A01G067800.1	Wheat	mitochondrion	72.18	71.94
GSMUA_Achr10P...	Banana	plastid	73.04	71.93
Os07t0406300-02	Rice	plastid	72.01	71.77
EES10513	Sorghum	plastid	72.53	71.31
TraesCS2B01G080000.1	Wheat	plastid	71.67	70.59
TraesCS2D01G066100.1	Wheat	plastid	71.16	70.44
CDY65677	Canola	plastid	67.58	69.6
CDY69162	Canola	plastid	67.41	69.3
HORVU2Hr1G010520.37	Barley	cytosol, plasma membrane	71.16	64.06
CDY32178	Canola	plastid	45.22	44.99
CDY31093	Canola	plastid	45.73	43.02
CDY00159	Canola	cytosol	35.15	39.39
CDX83677	Canola	cytosol	34.81	39.16
CDX67476	Canola	cytosol	34.98	39.12
CDY20053	Canola	cytosol	34.13	38.84
CDY11711	Canola	cytosol	35.15	38.72
CDY13701	Canola	cytosol	34.47	38.11
Zm00001d017760_P001	Maize	cytosol	7.85	37.1
Zm00001d025288_P001	Maize	cytosol	7.51	36.97

Protein Annotations

KEGG:00030+1.1.1.49	KEGG:00480+1.1.1.49	Gene3D:3.30.360.10	Gene3D:3.40.50.720	MapMan:3.9.1.1	GO:A0A078JGZ8
UniProt:A0A078JGZ8	EnsemblPlants:CDY66858	ProteinID:CDY66858	ProteinID:CDY66858.1	InterPro:G6P_DH	InterPro:G6P_DH_AS
InterPro:G6P_DH_C	InterPro:G6P_DH_NAD-bd	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004345
GO:GO:0005488	GO:GO:0005975	GO:GO:0006006	GO:GO:0006098	GO:GO:0006139	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016491	GO:GO:0050661	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00056717001
HAMAP:MF_00966	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00479	PFAM:PF02781	PIRSF:PIRSF000110	PRINTS:PR00079
ScanProsite:PS00069	PANTHER:PTHR23429	PANTHER:PTHR23429:SF3	MetaCyc:PWY-7268	SUPFAM:SSF51735	SUPFAM:SSF55347
TIGRFAMs:TIGR00871	UniPathway:UPA00115	UniParc:UPI0004EE6F8E	SEG:seg	:	:

Description

BnaA08g31100DGlucose-6-phosphate 1-dehydrogenase [Source:UniProtKB/TrEMBL;Acc:A0A078JGZ8]

Coordinates

chrLK035525:-:3128..5648

Molecular Weight (calculated)

65888.7 Da

IEP (calculated)

8.492

GRAVY (calculated)

-0.327

Length

586 amino acids

Sequence
(BLAST)

001: MSSSLSRPSY SSSSRTSSPF FPNHSSLING GTRRSLSFLS ASPQELCLRS KRKSVQSSVV LQDGAVVVTN SSPIEKLKDG LLSVPSQEVV AELGGGEHES
101: TVSITVVGAS GDLAKKKIFP ALFALYYEGC LPEHFTIYGY ARSKMTDGEL RHMVSKTLTC RIDKRANCGE KMEEFLKRCF YHTGQYDSQE HFVALNKKLK
201: EHEGGRLSNR LFYLSIPPNI FVDAVKCASS SASSLSGWTR VIVEKPFGRD SKTSAALTNS LKHYLEEDQI FRIDHYLGKE LVENLSVLRF SNLIFEPLWS
301: RQYIQNVQFI FSEDFGTEGR GGYFDHYGII RDIMQNHLLQ ILALFAMETP VSLDAEDIRN EKVKVLRSMR PIQLEDVVIG QYKGTTTKGG VTYPSYTDDK
401: TVPKDSLTPT FAAAALFIDN ARWDGVPFLM KAGKALHTRS AEIRVQFRHV PGNLYNRNSG GTNLDRTTNE LVIRVQPDEG IYLKINNKVP GLGMRLDQSH
501: LNLLYSARYS KEIPDAYERL LLDAIEGERR LFIRSDELDA AWALFTPLLK EIEEKKMIPE LYPYGSRGPV GAHYLAAKHN VQWGDF

Best Arabidopsis Sequence Match ( AT1G09420.1 )
(BLAST)

001: MSLSSCLLPF SQSATAPSSS VCSCHLAASF SNFPVSSRDY SFSRSGSLVL NGGGSNLCRR FCGLKLWILK SLNRRQGNNR KHQPVNELTT HSKHTFLSDD
101: ERGFAEETRA EDLRPEENIL GTDLNDGFHN VGDLPPVSKQ LSDDLSDVRR RASLCIAVVG ATGELARGKI FPALFALYYS GYLPEDVAIF GVSRKNLTDE
201: DLRSIIASTL TCRVDHQENC GGKMDAFQSR TYYINGGYNN RDGMSRLAER MKQIEGESEA NRIFYLSVPQ EALVDVACTI GDNAQAPRGW TRIIVEKPFG
301: FNSHSSHQLT KSLLSKFEEK QIYRIDHMLG RNLIENLTVL RFSNLVFEPL WNRTYIRNIQ VIISESIAQT EKFSDGYGII RDIVHSHILQ TIALLAMEPP
401: ISLDGEDIRN EKVKVLRSIR KIDPRDVILG QYKSSSRDKN GVILNGVDPT YCAAALYIDN ARWDGVPFLV RVGTGLIKHR VEIHVQFRHV PGNLYRENIG
501: INIDLGTNEL ILRDEPDEAI LVKINNKVPG LGLQLDASEL NLLYKDRYKT EVPDSYEHLI HDVIDGDNHL FMRSDEVAAA WNILSPVLEE IDKHHTAPEL
601: YEFGGRGPVA AYYLWAKHGV PWADD

Arabidopsis Description

G6PD4Glucose-6-phosphate 1-dehydrogenase [Source:UniProtKB/TrEMBL;Acc:F4I0Y8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.