CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
CDY03902
CDY15726
CDY66858
CDY68583

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G24280.1	CDY03902	AT1G24280.1	21798944
AT1G24280.1	CDY15726	AT1G24280.1	21798944
AT1G24280.1	CDY66858	AT1G24280.1	21798944
AT1G24280.1	CDY68583	AT1G24280.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY03902	Canola	plastid	93.19	92.56
Bra030031.1-P	Field mustard	plastid	85.69	85.84
CDY66858	Canola	plastid	85.52	85.67
AT1G24280.1	Thale cress	plastid	85.01	83.31
CDY68583	Canola	plastid	60.65	81.09
CDY72674	Canola	endoplasmic reticulum	53.32	80.88
CDX69669	Canola	plastid	81.6	79.97
GSMUA_Achr6P16590_001	Banana	cytosol	72.57	79.92
VIT_01s0146g00060.t01	Wine grape	plastid	77.34	77.61
CDX78507	Canola	endoplasmic reticulum	83.65	77.44
CDX97227	Canola	endoplasmic reticulum	82.28	77.28
Solyc05g015950.2.1	Tomato	plastid	75.47	75.99
PGSC0003DMT400028015	Potato	plastid	74.62	75.26
KRH01562	Soybean	endoplasmic reticulum, nucleus, plastid	75.64	73.88
KRH70548	Soybean	nucleus, plastid	75.47	73.59
EES10513	Sorghum	plastid	74.45	73.32
Os07t0406300-02	Rice	plastid	73.25	73.13
GSMUA_Achr10P...	Banana	plastid	73.76	72.77
TraesCS2A01G067800.1	Wheat	mitochondrion	72.57	72.45
TraesCS2B01G080000.1	Wheat	plastid	73.08	72.1
TraesCS2D01G066100.1	Wheat	plastid	71.89	71.28
CDY65677	Canola	plastid	68.14	70.3
CDY69162	Canola	plastid	67.97	70.0
HORVU2Hr1G010520.37	Barley	cytosol, plasma membrane	71.38	64.36
CDY32178	Canola	plastid	46.85	46.69
CDY31093	Canola	plastid	46.51	43.82
CDX83677	Canola	cytosol	35.43	39.92
CDY00159	Canola	cytosol	35.43	39.77
CDY20053	Canola	cytosol	34.58	39.42
CDX67476	Canola	cytosol	35.09	39.31
CDY11711	Canola	cytosol	35.43	39.1
CDY13701	Canola	cytosol	34.92	38.68
Zm00001d017760_P001	Maize	cytosol	7.84	37.1
Zm00001d025288_P001	Maize	cytosol	7.5	36.97

Protein Annotations

KEGG:00030+1.1.1.49	KEGG:00480+1.1.1.49	Gene3D:3.30.360.10	Gene3D:3.40.50.720	MapMan:3.9.1.1	GO:A0A078FRF3
UniProt:A0A078FRF3	EnsemblPlants:CDY15726	ProteinID:CDY15726	ProteinID:CDY15726.1	InterPro:G6P_DH	InterPro:G6P_DH_AS
InterPro:G6P_DH_C	InterPro:G6P_DH_NAD-bd	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004345
GO:GO:0005488	GO:GO:0005975	GO:GO:0006006	GO:GO:0006098	GO:GO:0006139	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016491	GO:GO:0050661	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00089953001
HAMAP:MF_00966	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00479	PFAM:PF02781	PIRSF:PIRSF000110	PRINTS:PR00079
ScanProsite:PS00069	PANTHER:PTHR23429	PANTHER:PTHR23429:SF3	MetaCyc:PWY-7268	SUPFAM:SSF51735	SUPFAM:SSF55347
TIGRFAMs:TIGR00871	UniPathway:UPA00115	UniParc:UPI0004EE917D	SEG:seg	:	:

Description

BnaA07g08970DGlucose-6-phosphate 1-dehydrogenase [Source:UniProtKB/TrEMBL;Acc:A0A078FRF3]

Coordinates

chrLK032056:+:750902..753970

Molecular Weight (calculated)

65954.5 Da

IEP (calculated)

7.354

GRAVY (calculated)

-0.346

Length

587 amino acids

Sequence
(BLAST)

001: MSSFSTSLSS SSPFLSNHSS LINSDPSRRS LSFPQGINLD DLCVRSKRKL VQSSVAVGDG SVITKSSSAE IKTGPLSIPS QEAADKLVIE SNGGEQQSTV
101: SITVVGASGD LAKKKIFPAL FALYYEGCLP EHFTIYGYAR SKMTDAELRD MVSKTLTCRI DKRENCGEKM EEFLKRCFYH TGQYDSQEHF VTLDKKLKEH
201: EGGRLSNRLF YLSIPPNIFV DAVKCASSSA SSISGWTRVI VEKPFGRDSK TSAALTKSLK QYLEEDQIFR IDHYLGKELV ENLSVLRFSN LIFEPLWSRQ
301: YIQNVQFIFS EDFGTEGRGG YFDHYGIIRD IMQNHLLQIL ALFAMETPVS LDAEDIRNEK VKVLRSMRPI QLEDVVIGQY KSTTKGGVTY PGYTDDKTVP
401: KDSLTPTFAA AALFIDNARW DGVPFLMKAG KALHTRSAEI RVQFRHVPGN LYNRNSGGTN LDRTTNELVI RVQPDEGIYL KINNKVPGLG MRLDQSNLNL
501: LYSARYSKEI PDAYERLLLD AIEGERRLFI RSDELDAAWA LFTPLLKEIE EKKTIPEFYP YGSRGPVGAH YLAAKHNVQW GDLSLDQ

Best Arabidopsis Sequence Match ( AT1G24280.1 )
(BLAST)

001: MSSLSCPTYR SRTSSSSPFL SNHHHSSLIN VVDPRRSLSF HYASPQGLNL AELCVVRSQR RSVQSSVVVQ DGSVATESSS SEEAKDVGVL TIPSLEADKV
101: VAESDGGEQL STVSITVVGA SGDLAKKKIF PALFALYYEG CLPEHFTIFG YARSKMTDAE LRVMVSKTLT CRIDKRANCG EKMEEFLKRC FYHSGQYDSQ
201: EHFVALDEKL KEHEGGRLSN RLFYLSIPPN IFVDAVKCAS SSASSVNGWT RVIVEKPFGR DSKTSAALTK SLKQYLEEDQ IFRIDHYLGK ELVENLSVLR
301: FSNLIFEPLW SRQYIRNVQF IFSEDFGTEG RGGYFDNYGI IRDIMQNHLL QILALFAMET PVSLDAEDIR NEKVKVLRSM RPIKLEDVVI GQYKSHSIGG
401: VTYPSYTDDK TVPKGSLTPT FAAAALFIDN ARWDGVPFLM KAGKALNTRS AEIRVQFRHV PGNLYNRNSG TDRDQTTNEL VIRVQPDEAI YLKINNKVPG
501: LGMRLDQSNL NLLYSARYSK EIPDAYERLL LDAIEGERRL FIRSDELDAA WALFTPLLKE IEEKKTTPEF YPYGSRGPVG AHYLAAKHKV QWGDLSLDQ

Arabidopsis Description

G6PD3Glucose-6-phosphate 1-dehydrogenase [Source:UniProtKB/TrEMBL;Acc:A0A178WP00]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.