Factsheet for TraesCS2B01G080000.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

plastid: 22160430

msms PMID: 22160430 doi

AH Kamal, K Cho, S Komatsu, N Uozumi, JS Choi, SH Woo

Department of Crop Science, Chungbuk National University, 410 Seongbong-ro, Heungdeok-gu, Cheongju, Chungbuk, 361-763, Korea.

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS2A01G067800.1
TraesCS2B01G080000.1
TraesCS2D01G066100.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G24280.1	TraesCS2A01G067800.1	AT1G24280.1	21798944
AT1G24280.1	TraesCS2B01G080000.1	AT1G24280.1	21798944
AT1G24280.1	TraesCS2D01G066100.1	AT1G24280.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G067800.1	Wheat	mitochondrion	88.4	89.46
TraesCS2D01G066100.1	Wheat	plastid	88.4	88.85
GSMUA_Achr6P16590_001	Banana	cytosol	73.11	81.61
Os07t0406300-02	Rice	plastid	80.17	81.12
EES10513	Sorghum	plastid	80.17	80.03
HORVU2Hr1G010520.37	Barley	cytosol, plasma membrane	86.39	78.96
GSMUA_Achr10P...	Banana	plastid	74.96	74.96
VIT_01s0146g00060.t01	Wine grape	plastid	73.61	74.87
Zm00001d025015_P002	Maize	plastid	80.5	73.58
Solyc05g015950.2.1	Tomato	plastid	71.76	73.24
CDY15726	Canola	plastid	72.1	73.08
Bra030031.1-P	Field mustard	plastid	71.93	73.04
KRH01562	Soybean	endoplasmic reticulum, nucleus, plastid	73.28	72.55
AT5G13110.1	Thale cress	plastid	71.93	71.81
KRH70548	Soybean	nucleus, plastid	72.61	71.76
CDY03902	Canola	plastid	71.26	71.74
CDY66858	Canola	plastid	70.59	71.67
PGSC0003DMT400028015	Potato	plastid	70.08	71.65
Bra010958.1-P	Field mustard	plastid	70.42	71.5
Bra008855.1-P	Field mustard	plastid	70.92	70.57
CDX69669	Canola	plastid	70.92	70.45
AT1G24280.1	Thale cress	plastid	70.92	70.45
TraesCS6B01G174700.1	Wheat	plastid	66.05	68.35
CDX97227	Canola	endoplasmic reticulum	71.26	67.84
CDX78507	Canola	endoplasmic reticulum	71.26	66.88
CDY68583	Canola	plastid	49.08	66.51
TraesCS4B01G178700.1	Wheat	plastid	45.21	43.6
TraesCS2B01G362700.1	Wheat	cytosol, unclear	34.29	40.08
TraesCS6B01G243100.2	Wheat	peroxisome	34.62	39.85

Protein Annotations

KEGG:00030+1.1.1.49	KEGG:00480+1.1.1.49	Gene3D:3.30.360.10	Gene3D:3.40.50.720	MapMan:3.9.1.1	InterPro:G6P_DH
InterPro:G6P_DH_AS	InterPro:G6P_DH_C	InterPro:G6P_DH_NAD-bd	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004345	GO:GO:0005488	GO:GO:0005975	GO:GO:0006006	GO:GO:0008150	GO:GO:0008152
GO:GO:0050661	GO:GO:0055114	HAMAP:MF_00966	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00479	PFAM:PF02781
PRINTS:PR00079	ScanProsite:PS00069	PANTHER:PTHR23429	PANTHER:PTHR23429:SF3	SUPFAM:SSF51735	SUPFAM:SSF55347
TIGRFAMs:TIGR00871	EnsemblPlantsGene:TraesCS2B01G080000	EnsemblPlants:TraesCS2B01G080000.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr2B:-:44424580..44429196

Molecular Weight (calculated)

66065.2 Da

IEP (calculated)

8.490

GRAVY (calculated)

-0.261

Length

595 amino acids

Sequence
(BLAST)

001: MALSCMRCPA AGAGGGAAAA RRPAGPRLVP SSSIAVSFAR CGGRSAAAAA SGWRIHAVAG KGVKAPMDAV ESAVAPAAPS MVENGSSSIT VEEFEDLASL
101: VKDDEASVSI TVVGASGDLA KKKIFPALFA LYYEGCLPKH FSIFGYARSK MTDAELRDMV SKTLTCRIDK RENCSEKMEE FLKRCFYHSG QYDSEEDFKE
201: LSKKIKQHEG PRVSNHLFYL SIPPNIFLDV VKCASKSASS VSGWTRVIVE KPFGRDSESS AALTKGLKQY LTEDQIFRID HYLGKELVEN LSVLRFSNLV
301: FEPLWSRQYI RNVQLIFSED FGTEGRGGYF DSYGIIRDIM QNHLLQILAL FAMETPISLE AEDIRNEKVK VLRSMKPLRL EDVVIGQYKS HTKGGITYPG
401: YTEDKTVPKG SLTPTFAAAA LFINNARWDG VPFLMKAGKA LHTKQAEIRV QFRHVPGNLY KGSFGTDLDR ATNELVIRVQ PDEGIYLKIN NKIPGLGMRL
501: DRSNLNLHYA ARYPKEIPDA YERLLLDAIE GERRLFIRSD ELDAAWELFT PLLKELEQKR MAPELYPYGS RGPVGAHYLA AKYNVRWGDL GGSEH

Best Arabidopsis Sequence Match ( AT5G13110.1 )
(BLAST)

001: MAALSSSVTT RSYHSGYLAS FSPVNGDRHR SLSFLSASPQ GLNPLDLCVR FQRKSGRASV FMQDGAIVTN SNSSESKTSL KGLKDEVLSA LSQEAAKVGV
101: ESDGQSQSTV SITVVGASGD LAKKKIFPAL FALYYEGCLP EHFTIFGYSR SKMTDVELRN MVSKTLTCRI DKRANCGEKM EEFLKRCFYH SGQYDSQEHF
201: TELDKKLKEH EAGRISNRLF YLSIPPNIFV DAVKCASTSA SSVNGWTRVI VEKPFGRDSE TSAALTKSLK QYLEEDQIFR IDHYLGKELV ENLSVLRFSN
301: LIFEPLWSRQ YIRNVQFIFS EDFGTEGRGG YFDNYGIIRD IMQNHLLQIL ALFAMETPVS LDAEDIRNEK VKVLRSMRPI RVEDVVIGQY KSHTKGGVTY
401: PAYTDDKTVP KGSLTPTFAA AALFIDNARW DGVPFLMKAG KALHTRSAEI RVQFRHVPGN LYNRNTGSDL DQATNELVIR VQPDEAIYLK INNKVPGLGM
501: RLDRSNLNLL YSARYSKEIP DAYERLLLDA IEGERRLFIR SDELDAAWSL FTPLLKEIEE KKRIPEYYPY GSRGPVGAHY LAAKHKVQWG DVSIDQ

Arabidopsis Description

G6PD2Glucose-6-phosphate 1-dehydrogenase 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9FY99]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.