Factsheet for GSMUA_Achr6P16590_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr6P16590_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G24280.1	GSMUA_Achr10P...	AT1G24280.1	21798944
AT1G24280.1	GSMUA_Achr6P16590_001	AT1G24280.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	plastid	87.24	78.15
VIT_01s0146g00060.t01	Wine grape	plastid	82.74	75.38
Os07t0406300-02	Rice	plastid	82.74	75.0
EES10513	Sorghum	plastid	83.49	74.66
Solyc05g015950.2.1	Tomato	plastid	81.24	74.27
TraesCS2A01G067800.1	Wheat	mitochondrion	81.24	73.64
Bra030031.1-P	Field mustard	plastid	80.68	73.38
PGSC0003DMT400028015	Potato	plastid	79.92	73.2
TraesCS2B01G080000.1	Wheat	plastid	81.61	73.11
KRH01562	Soybean	endoplasmic reticulum, nucleus, plastid	82.18	72.88
CDY15726	Canola	plastid	79.92	72.57
TraesCS2D01G066100.1	Wheat	plastid	80.49	72.47
KRH70548	Soybean	nucleus, plastid	81.8	72.43
CDY66858	Canola	plastid	79.17	72.01
AT1G24280.1	Thale cress	plastid	80.86	71.95
CDY03902	Canola	plastid	79.74	71.91
Bra010958.1-P	Field mustard	plastid	78.8	71.67
Bra008855.1-P	Field mustard	plastid	80.3	71.57
AT5G13110.1	Thale cress	plastid	79.92	71.48
CDX69669	Canola	plastid	79.74	70.95
GSMUA_Achr8P05290_001	Banana	plastid	77.49	70.0
CDX97227	Canola	endoplasmic reticulum	80.68	68.8
CDY68583	Canola	plastid	56.1	68.11
CDX78507	Canola	endoplasmic reticulum	80.49	67.67
Zm00001d025015_P002	Maize	plastid	82.18	67.28
HORVU2Hr1G010520.37	Barley	cytosol, plasma membrane	80.86	66.21
GSMUA_Achr11P...	Banana	cytosol	50.47	45.9
GSMUA_Achr8P28750_001	Banana	cytosol	39.21	40.19
GSMUA_Achr9P07730_001	Banana	cytosol	38.65	38.29
GSMUA_Achr6P28350_001	Banana	cytosol	39.77	34.19

Protein Annotations

KEGG:00030+1.1.1.49	KEGG:00480+1.1.1.49	Gene3D:3.30.360.10	Gene3D:3.40.50.720	MapMan:3.9.1.1	InterPro:G6P_DH
InterPro:G6P_DH_AS	InterPro:G6P_DH_C	InterPro:G6P_DH_NAD-bd	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004345	GO:GO:0005488	GO:GO:0005975	GO:GO:0006006	GO:GO:0006098	GO:GO:0006139
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016491	GO:GO:0050661	GO:GO:0055114
EnsemblPlantsGene:GSMUA_Achr6G16590_001	EnsemblPlants:GSMUA_Achr6P16590_001	EnsemblPlants:GSMUA_Achr6T16590_001	UniProt:M0T7K7	HAMAP:MF_00966	InterPro:NAD(P)-bd_dom_sf
PFAM:PF00479	PFAM:PF02781	PIRSF:PIRSF000110	PRINTS:PR00079	ScanProsite:PS00069	PANTHER:PTHR23429
PANTHER:PTHR23429:SF3	SUPFAM:SSF51735	SUPFAM:SSF55347	TIGRFAMs:TIGR00871	UniParc:UPI000296805C	SEG:seg

Description

Glucose-6-phosphate 1-dehydrogenase, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr6G16590_001]

Coordinates

chr6:-:11041791..11049089

Molecular Weight (calculated)

60732.6 Da

IEP (calculated)

6.535

GRAVY (calculated)

-0.359

Length

533 amino acids

Sequence
(BLAST)

001: MFWLLAYPKE APSKNVEIGG LLGLSSEEYR DVIGPNSSER EPTVSITVVG ASGDLAKKKI FPALFALYYE DCLPKHFTIF GYARSKMTDA ELRTMVSKTL
101: TCRIDKRENC NEKMEQFLQR CFYHSGQYES EENFADLDKE LKEHEVIFGG RLSNRLFYLS IPPNIFIDVV KSASKSASSK NGWTRVIVEK PFGRDSESSA
201: ALTRGLKQYL DEDQIFRIDH YLGKELVENL SILRFSNLVF EPLWSRQYIR NVQLIFSEDF GTEGRGGYFD NYGIIRDIMQ NHLLQILALF AMETPVSLDA
301: EDIRNEKVKV LRSMKPLQLE NVVIGQYRSH TKGGVAYPGY TDDKTVPKGS LTPTFAAAAL FIDNARWDGV PFLMKAGKAL ETRRTEIRVQ FRHVPGNLYK
401: RSFGTDLDRA TNELVIRVQP DEAIYLKINN KIPGLGMRLD RSNLNLLYAS RYSKEIPDAY ERLLLDAIEG ERRLFIRSDE LDAAWELFTP LLKELEEKKI
501: APELYPYGSC GPAGAHYLAA NYNVRWGDTA SDA

Best Arabidopsis Sequence Match ( AT5G13110.1 )
(BLAST)

001: MAALSSSVTT RSYHSGYLAS FSPVNGDRHR SLSFLSASPQ GLNPLDLCVR FQRKSGRASV FMQDGAIVTN SNSSESKTSL KGLKDEVLSA LSQEAAKVGV
101: ESDGQSQSTV SITVVGASGD LAKKKIFPAL FALYYEGCLP EHFTIFGYSR SKMTDVELRN MVSKTLTCRI DKRANCGEKM EEFLKRCFYH SGQYDSQEHF
201: TELDKKLKEH EAGRISNRLF YLSIPPNIFV DAVKCASTSA SSVNGWTRVI VEKPFGRDSE TSAALTKSLK QYLEEDQIFR IDHYLGKELV ENLSVLRFSN
301: LIFEPLWSRQ YIRNVQFIFS EDFGTEGRGG YFDNYGIIRD IMQNHLLQIL ALFAMETPVS LDAEDIRNEK VKVLRSMRPI RVEDVVIGQY KSHTKGGVTY
401: PAYTDDKTVP KGSLTPTFAA AALFIDNARW DGVPFLMKAG KALHTRSAEI RVQFRHVPGN LYNRNTGSDL DQATNELVIR VQPDEAIYLK INNKVPGLGM
501: RLDRSNLNLL YSARYSKEIP DAYERLLLDA IEGERRLFIR SDELDAAWSL FTPLLKEIEE KKRIPEYYPY GSRGPVGAHY LAAKHKVQWG DVSIDQ

Arabidopsis Description

G6PD2Glucose-6-phosphate 1-dehydrogenase 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9FY99]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.