Factsheet for TraesCS2A01G067800.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 5
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS2A01G067800.1
TraesCS2B01G080000.1
TraesCS2D01G066100.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G24280.1	TraesCS2A01G067800.1	AT1G24280.1	21798944
AT1G24280.1	TraesCS2B01G080000.1	AT1G24280.1	21798944
AT1G24280.1	TraesCS2D01G066100.1	AT1G24280.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G080000.1	Wheat	plastid	89.46	88.4
TraesCS2D01G066100.1	Wheat	plastid	88.44	87.84
GSMUA_Achr6P16590_001	Banana	cytosol	73.64	81.24
Os07t0406300-02	Rice	plastid	79.42	79.42
HORVU2Hr1G010520.37	Barley	cytosol, plasma membrane	86.05	77.73
EES10513	Sorghum	plastid	78.74	77.68
VIT_01s0146g00060.t01	Wine grape	plastid	73.3	73.68
AT5G13110.1	Thale cress	plastid	74.32	73.32
GSMUA_Achr10P...	Banana	plastid	73.98	73.11
Bra030031.1-P	Field mustard	plastid	72.45	72.7
CDY15726	Canola	plastid	72.45	72.57
Solyc05g015950.2.1	Tomato	plastid	71.77	72.38
CDY03902	Canola	plastid	72.62	72.25
KRH01562	Soybean	endoplasmic reticulum, nucleus, plastid	73.81	72.21
CDY66858	Canola	plastid	71.94	72.18
Bra010958.1-P	Field mustard	plastid	71.77	72.01
KRH70548	Soybean	nucleus, plastid	73.64	71.93
PGSC0003DMT400028015	Potato	plastid	71.09	71.82
Bra008855.1-P	Field mustard	plastid	72.96	71.74
CDX69669	Canola	plastid	72.96	71.62
Zm00001d025015_P002	Maize	plastid	79.08	71.43
AT1G24280.1	Thale cress	plastid	72.45	71.12
CDX97227	Canola	endoplasmic reticulum	73.3	68.96
CDX78507	Canola	endoplasmic reticulum	73.98	68.61
CDY68583	Canola	plastid	50.68	67.88
TraesCS6A01G146500.1	Wheat	cytosol	66.16	61.55
TraesCS4A01G126200.2	Wheat	plastid	44.05	41.64
TraesCS2A01G320400.1	Wheat	cytosol, golgi	34.52	39.88
TraesCS6A01G211600.1	Wheat	peroxisome	34.86	39.65

Protein Annotations

KEGG:00030+1.1.1.49	KEGG:00480+1.1.1.49	Gene3D:3.30.360.10	Gene3D:3.40.50.720	MapMan:3.9.1.1	InterPro:G6P_DH
InterPro:G6P_DH_AS	InterPro:G6P_DH_C	InterPro:G6P_DH_NAD-bd	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004345	GO:GO:0005488	GO:GO:0005975	GO:GO:0006006	GO:GO:0008150	GO:GO:0008152
GO:GO:0050661	GO:GO:0055114	HAMAP:MF_00966	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00479	PFAM:PF02781
PIRSF:PIRSF000110	PRINTS:PR00079	ScanProsite:PS00069	PANTHER:PTHR23429	PANTHER:PTHR23429:SF3	SUPFAM:SSF51735
SUPFAM:SSF55347	TIGRFAMs:TIGR00871	EnsemblPlantsGene:TraesCS2A01G067800	EnsemblPlants:TraesCS2A01G067800.1	SEG:seg	:

Description

No Description!

Coordinates

chr2A:-:30148107..30152542

Molecular Weight (calculated)

66090.3 Da

IEP (calculated)

8.796

GRAVY (calculated)

-0.313

Length

588 amino acids

Sequence
(BLAST)

001: MRSRQGVAHP RRRRERRWAL SSPLALFRSA GVSILSALLG PSPCSVQSPG DALLVKAPMD AVENAVAPAA PSTVANGTSS AITVEEFEDL ASLVKDDEAS
101: VSITVVGASG DLAKKKIFPA LFALYYEGCL PKHFSIFGYA RSKMTDAELR DMVSKTLTCR IDKRENCSEK MEEFLKRCFY HSGQYDSEED FRELGKKIKQ
201: HEGPRVSNHL FYLSIPPNIF LDVVKCASKS ASSVSGWTRV IVEKPFGRDS ESSAALTKGL KQYLTEDQIF RIDHYLGKEL VENLSVLRFS NLVFEPLWSR
301: QYIRNVQLIF SEDFGTEGRG GYFDSYGIIR DIMQNHLLQI LALFAMETPI SLEAEDIRNE KVKVLRSMKP LRLEDVVIGQ YKSHTKGGIT YPGYTEDKTV
401: PKGSLTPTFA AAALFINNAR WDGVPFLMKA GKALHTKQAE IRVQFRHVPG NLYKGSFGTD LDRATNELVI RVQPDEGIYL KINNKIPGLG MRLDRSNLNL
501: HYAARYPKEI PDAYERLLLD AIEGERRLFI RSDELDAAWE LFTPLLKELE QKRMAPELYP YGSRGPVGAH YLAAKYKVRW GDLGGSEH

Best Arabidopsis Sequence Match ( AT5G13110.1 )
(BLAST)

001: MAALSSSVTT RSYHSGYLAS FSPVNGDRHR SLSFLSASPQ GLNPLDLCVR FQRKSGRASV FMQDGAIVTN SNSSESKTSL KGLKDEVLSA LSQEAAKVGV
101: ESDGQSQSTV SITVVGASGD LAKKKIFPAL FALYYEGCLP EHFTIFGYSR SKMTDVELRN MVSKTLTCRI DKRANCGEKM EEFLKRCFYH SGQYDSQEHF
201: TELDKKLKEH EAGRISNRLF YLSIPPNIFV DAVKCASTSA SSVNGWTRVI VEKPFGRDSE TSAALTKSLK QYLEEDQIFR IDHYLGKELV ENLSVLRFSN
301: LIFEPLWSRQ YIRNVQFIFS EDFGTEGRGG YFDNYGIIRD IMQNHLLQIL ALFAMETPVS LDAEDIRNEK VKVLRSMRPI RVEDVVIGQY KSHTKGGVTY
401: PAYTDDKTVP KGSLTPTFAA AALFIDNARW DGVPFLMKAG KALHTRSAEI RVQFRHVPGN LYNRNTGSDL DQATNELVIR VQPDEAIYLK INNKVPGLGM
501: RLDRSNLNLL YSARYSKEIP DAYERLLLDA IEGERRLFIR SDELDAAWSL FTPLLKEIEE KKRIPEYYPY GSRGPVGAHY LAAKHKVQWG DVSIDQ

Arabidopsis Description

G6PD2Glucose-6-phosphate 1-dehydrogenase 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9FY99]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.