Factsheet for Os03t0412800-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 5

Predictors

GFP

MS/MS

Papers

plastid: 17189339
plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 17189339 doi

T Kleffmann, A von Zychlinski, D Russenberger, M Hirsch-Hoffmann, P Gehrig, W Gruissem, S Baginsky

Institute of Plant Sciences, Eidgenössische Technische Hochschule Zurich, 8092 Zurich, Switzerland.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU6Hr1G028710.1	Barley	plastid	76.95	77.35
TraesCS6B01G174700.1	Wheat	plastid	76.78	77.04
TraesCS6D01G135800.2	Wheat	plastid	76.6	77.0
KXG39152	Sorghum	plastid	78.86	76.99
TraesCS6A01G146500.1	Wheat	cytosol	75.74	69.15
Os07t0406300-02	Rice	plastid	69.15	67.86
Zm00001d029502_P001	Maize	plastid	75.04	67.55
Os03t0318500-01	Rice	plastid	47.66	43.72
Os02t0600400-01	Rice	golgi, plasma membrane	36.4	40.62
Os04t0485300-01	Rice	cytosol, mitochondrion, plastid	35.18	40.2

Protein Annotations

KEGG:00030+1.1.1.49	KEGG:00480+1.1.1.49	Gene3D:3.30.360.10	Gene3D:3.40.50.720	MapMan:3.9.1.1	EntrezGene:4333103
ProteinID:AAS07054.1	ProteinID:ABF96582.1	ProteinID:BAF12270.1	ProteinID:BAS84674.1	ncoils:Coil	InterPro:G6P_DH
InterPro:G6P_DH_AS	InterPro:G6P_DH_C	InterPro:G6P_DH_NAD-bd	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004345	GO:GO:0005488	GO:GO:0005975	GO:GO:0006006	GO:GO:0006098	GO:GO:0006139
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016491	GO:GO:0050661	GO:GO:0055114
HAMAP:MF_00966	InterPro:NAD(P)-bd_dom_sf	EnsemblPlantsGene:Os03g0412800	EnsemblPlants:Os03t0412800-01	PFAM:PF00479	PFAM:PF02781
PIRSF:PIRSF000110	PRINTS:PR00079	ScanProsite:PS00069	PANTHER:PTHR23429	PANTHER:PTHR23429:SF1	UniProt:Q75IZ9
SUPFAM:SSF51735	SUPFAM:SSF55347	TIGRFAMs:TIGR00871	UniParc:UPI0000239498	RefSeq:XP_015628664.1	SEG:seg

Description

d-glucose 6-phosphate dehydrogenase 4Similar to Glucose-6-phosphate dehydrogenase precursor. (Os03t0412800-01)

Coordinates

chr3:+:17067904..17072245

Molecular Weight (calculated)

64844.0 Da

IEP (calculated)

8.502

GRAVY (calculated)

-0.417

Length

577 amino acids

Sequence
(BLAST)

001: MAGTGLRFRQ GAIFFSGAHA AAHPRTRTPH HHCSPQRTHD ARGRCRLTAK SANGRPQISA SFRDVAIDGA QSEDGAPEQG GSTVSITVVG ASGDLAKKKI
101: FPALFALYYE DCLPEHFTVF GYARSKMSDE ELRNMISLTL TCRIDQRENC SDKMEQFLKR CFYQSGQYNS EEGFSELDRK LKEKEAGKVP NRLFYLSIPP
201: NIFVDVVRSA SRTASSQDGW TRFIVEKPFG RDSESSGELT RNLKKYLAEE QIFRIDHYLG KELVENLSVL RFSNLVFEPL WSRNYIRNVQ LIFSEDFGTE
301: GRGGYFDNYG IIRDIMQNHL LQILALFAME TPVSLDAEDI RNEKVKVLRS MRQLRLEDVV VGQYKGHSKG GKTYPAYVDD PTVPSGSITP TFAAAALFID
401: NARWDGVPFL MKAGKALHTR RAEIRVQFRR VPGNLYGRRS RSVGGGGTTA TRELEKATNE LVLRVQPDEA IYLKINSKVP GLGMRLDSSD LNLLYSERYP
501: AEIPDAYERL LLDAIEGERR LFIRSDELDA AWAIFTPVLA DLEANKVAPE LYPYGSRGPV GAHYLAANHN VRWGDIS

Best Arabidopsis Sequence Match ( AT5G35790.1 )
(BLAST)

001: MATHSMIIPS PSSSSSSLAT AASPFKETLP LFSRSLTFPR KSLFSQVRLR FFAEKHSQLD TSNGCATNFA SLQDSGDQLT EEHVTKGEST LSITVVGASG
101: DLAKKKIFPA LFALFYEGCL PQDFSVFGYA RTKLTHEELR DMISSTLTCR IDQREKCGDK MEQFLKRCFY HSGQYNSEED FAELNKKLKE KEAGKISNRL
201: YYLSIPPNIF VDVVRCASLR ASSENGWTRV IVEKPFGRDS ESSGELTRCL KQYLTEEQIF RIDHYLGKEL VENLSVLRFS NLVFEPLWSR NYIRNVQLIF
301: SEDFGTEGRG GYFDQYGIIR DIMQNHLLQI LALFAMETPV SLDAEDIRSE KVKVLRSMKP LRLEDVVVGQ YKGHNKGGKT YPGYTDDPTV PNHSLTPTFA
401: AAAMFINNAR WDGVPFLMKA GKALHTRGAE IRVQFRHVPG NLYKKSFATN LDNATNELVI RVQPDEGIYL RINNKVPGLG MRLDRSDLNL LYRSRYPREI
501: PDAYERLLLD AIEGERRLFI RSDELDAAWD LFTPALKELE EKKIIPELYP YGSRGPVGAH YLASKYNVRW GDLGEA

Arabidopsis Description

APG1Glucose-6-phosphate 1-dehydrogenase 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q43727]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.