Factsheet for PGSC0003DMT400044818

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc07g045540.2.1	Tomato	plastid	98.27	98.27
CDY72674	Canola	endoplasmic reticulum	57.19	85.27
KRH44236	Soybean	peroxisome	30.33	83.73
VIT_12s0057g00940.t01	Wine grape	plastid	76.6	75.68
KRH47181	Soybean	nucleus, plastid	75.39	73.98
KRH44244	Soybean	nucleus, plastid	74.52	73.13
Bra035525.1-P	Field mustard	plastid	72.1	72.98
CDY69162	Canola	plastid	72.1	72.98
CDY65677	Canola	plastid	71.92	72.94
AT5G35790.1	Thale cress	plastid	71.92	72.05
GSMUA_Achr8P05290_001	Banana	plastid	72.1	70.51
PGSC0003DMT400028015	Potato	plastid	71.06	70.45
VIT_12s0057g01030.t01	Wine grape	plastid	70.54	69.57
PGSC0003DMT400007105	Potato	plastid	43.85	42.45
PGSC0003DMT400052250	Potato	cytosol	35.7	40.31

Protein Annotations

KEGG:00030+1.1.1.49	KEGG:00480+1.1.1.49	Gene3D:3.30.360.10	Gene3D:3.40.50.720	MapMan:3.9.1.1	ProteinID:CAA58775
ProteinID:CAA58775.1	InterPro:G6P_DH	InterPro:G6P_DH_AS	InterPro:G6P_DH_C	InterPro:G6P_DH_NAD-bd	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004345	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005975	GO:GO:0006006	GO:GO:0006098	GO:GO:0006139
GO:GO:0008150	GO:GO:0008152	GO:GO:0009051	GO:GO:0009507	GO:GO:0009536	GO:GO:0009570
GO:GO:0009987	GO:GO:0016491	GO:GO:0050661	GO:GO:0055114	UniProt:M1BGQ5	HAMAP:MF_00966
InterPro:NAD(P)-bd_dom_sf	PFAM:PF00479	PFAM:PF02781	EnsemblPlantsGene:PGSC0003DMG400017394	PGSC:PGSC0003DMG400017394	EnsemblPlants:PGSC0003DMT400044818
PIRSF:PIRSF000110	PRINTS:PR00079	ScanProsite:PS00069	PANTHER:PTHR23429	PANTHER:PTHR23429:SF1	SUPFAM:SSF51735
SUPFAM:SSF55347	TIGRFAMs:TIGR00871	UniParc:UPI000296E3B5	EMBL:X83923	SEG:seg	:

Description

Glucose-6-phosphate 1-dehydrogenase, chloroplastic [Source:PGSC_GENE;Acc:PGSC0003DMG400017394]

Coordinates

chr7:+:43649841..43655515

Molecular Weight (calculated)

65724.5 Da

IEP (calculated)

7.324

GRAVY (calculated)

-0.338

Length

577 amino acids

Sequence
(BLAST)

001: MGVQLRLNPC SSSSAATSPS TFHNGTPYFC KKFNFLPFRT QPLNWVSGIY SRIQPRKHFE VFSSNGFPLN AVSVQDVQVP LTELGSGDTT VSITVIGASG
101: DLAKKKIFPA LFALFYEDCL PENFVVFGYS RTKLSDEELR NMISTTLTCR IDKRENCDAK MEHFLERCFY HSGQYNSEDD FAELDYKLKE KEGCRVSNRL
201: FYLSIPPNIF VDVVRCASLK ASSTSGWTRV IVEKPFGRDL ESSSELTRSL KKYLTEEQIF RIDHYLGKEL VENLSVLRFS NLVFEPLWSR NYIRNVQFIF
301: SEDFGTEGRG GYFDHYGIIR DIMQNHLLQI LALFAMETPV SLDAEDIRNE KVKVLRSMRP LQLEDVVLGQ YKGHSNGAKS YPAYTDDPTV PNGSITPTFS
401: AAALFIDNAR WDGVPFLMKA GKALHTKRAE IRVQFRHVPG NLYKRNFGTD MDKATNELVL RLQPDEAIYL KINNKVPGLG MRLDRSDLNL LYKAKYRGEI
501: PDAYERLLLD AIEGERRLFI RSDELDAAWA LFTPLLKELE EKKIAPELYP YGSRGPVGAH YLAAKHNVRW GDLSGDD

Best Arabidopsis Sequence Match ( AT5G35790.1 )
(BLAST)

001: MATHSMIIPS PSSSSSSLAT AASPFKETLP LFSRSLTFPR KSLFSQVRLR FFAEKHSQLD TSNGCATNFA SLQDSGDQLT EEHVTKGEST LSITVVGASG
101: DLAKKKIFPA LFALFYEGCL PQDFSVFGYA RTKLTHEELR DMISSTLTCR IDQREKCGDK MEQFLKRCFY HSGQYNSEED FAELNKKLKE KEAGKISNRL
201: YYLSIPPNIF VDVVRCASLR ASSENGWTRV IVEKPFGRDS ESSGELTRCL KQYLTEEQIF RIDHYLGKEL VENLSVLRFS NLVFEPLWSR NYIRNVQLIF
301: SEDFGTEGRG GYFDQYGIIR DIMQNHLLQI LALFAMETPV SLDAEDIRSE KVKVLRSMKP LRLEDVVVGQ YKGHNKGGKT YPGYTDDPTV PNHSLTPTFA
401: AAAMFINNAR WDGVPFLMKA GKALHTRGAE IRVQFRHVPG NLYKKSFATN LDNATNELVI RVQPDEGIYL RINNKVPGLG MRLDRSDLNL LYRSRYPREI
501: PDAYERLLLD AIEGERRLFI RSDELDAAWD LFTPALKELE EKKIIPELYP YGSRGPVGAH YLASKYNVRW GDLGEA

Arabidopsis Description

APG1Glucose-6-phosphate 1-dehydrogenase 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q43727]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.