Factsheet for PGSC0003DMT400007105

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 11

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g100950.2.1	Tomato	cytosol	37.42	97.38
CDY32178	Canola	plastid	55.03	55.69
GSMUA_Achr11P...	Banana	cytosol	54.03	54.95
VIT_14s0060g00640.t01	Wine grape	plastid	58.22	54.91
KRG96694	Soybean	plastid	54.53	53.81
KRH68414	Soybean	plastid	55.2	53.76
CDY31093	Canola	plastid	54.36	52.01
AT1G09420.2	Thale cress	plastid	54.87	51.5
TraesCS4A01G126200.2	Wheat	plastid	52.52	50.32
TraesCS4D01G180300.2	Wheat	plastid	52.35	50.16
TraesCS4B01G178700.1	Wheat	plastid	51.51	49.76
Os03t0318500-01	Rice	plastid	52.01	49.28
OQU92694	Sorghum	plastid	51.17	48.03
HORVU4Hr1G052350.8	Barley	cytosol, nucleus	52.01	47.55
Bra030775.1-P	Field mustard	plastid	54.36	47.02
PGSC0003DMT400044818	Potato	plastid	42.45	43.85
PGSC0003DMT400028015	Potato	plastid	41.61	42.61
Zm00001d015288_P001	Maize	plastid	12.42	36.82
Zm00001d047587_P005	Maize	nucleus	51.01	33.26
PGSC0003DMT400052250	Potato	cytosol	27.52	32.09

Protein Annotations

KEGG:00030+1.1.1.49	KEGG:00480+1.1.1.49	EntrezGene:102592547	Gene3D:3.30.360.10	Gene3D:3.40.50.720	MapMan:3.9.1.1
InterPro:G6P_DH	InterPro:G6P_DH_C	InterPro:G6P_DH_NAD-bd	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004345	GO:GO:0005488	GO:GO:0005975	GO:GO:0006006	GO:GO:0006098	GO:GO:0006139
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016491	GO:GO:0050661	GO:GO:0055114
UniProt:M0ZSG9	HAMAP:MF_00966	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00479	PFAM:PF02781	EnsemblPlantsGene:PGSC0003DMG400002750
PGSC:PGSC0003DMG400002750	EnsemblPlants:PGSC0003DMT400007105	PRINTS:PR00079	PANTHER:PTHR23429	PANTHER:PTHR23429:SF4	SUPFAM:SSF51735
SUPFAM:SSF55347	TIGRFAMs:TIGR00871	UniParc:UPI000294FA96	RefSeq:XP_006344803.1	SEG:seg	:

Description

Glucose-6-phosphate 1-dehydrogenase [Source:PGSC_GENE;Acc:PGSC0003DMG400002750]

Coordinates

chr1:-:78551626..78559191

Molecular Weight (calculated)

66649.5 Da

IEP (calculated)

6.180

GRAVY (calculated)

-0.245

Length

596 amino acids

Sequence
(BLAST)

001: MASLSPVSLS TSSSETSIVP SIYRKLSVLP TVVVRSFPSH TIKKSRTQID YVAYVQPHDV NRPRSSIRST SFNVEGTGST TSLDEEVIID TSLTEASIKL
101: PLPLFETQSS SSGAPTDDSA SLSIAVIGAT GVLARKKIFP ALFALYYSGQ LPEKIGIFGY SRKKLTEEDL RAIIAPTLSC RIDHQENCEE KMDAFLKRIF
201: YLYGGYDNQE GMSKLNTLME EVEGKFGANR IFYLSVPQEA LIDVASSLSE KAQTQRGWNR VIIEKPFGLG SFSSHQLTTS LLSNFEEKQL YRIDHLLGRN
301: TIENLAVLRF SNLVFMPLWN RSYIHNIQVT FSEELGMQTS ARYPKGYGIL GDVVHSHIFQ TVALLAMEPP VTLDGEDVRH EKVKVLKSIR KLGSSDVILG
401: HSEADSGSNF KDMENLMPTY FGAVLHIDNA RWDGVPFLIK AGRGLKKNRV EIRIQFRRVP GNIYHKDGGG HMQDLVTNEL ILRDVPDEAI LIRINNKIPG
501: LGMNLEASEL NLLYKDKYNV DVTDSYEQLL HDVIDGDNHL FMRSDEVEAA WNILSPVLSE LDNNNATLEH YEFGSKGPDK AGNLWAKHGV KWLDDL

Best Arabidopsis Sequence Match ( AT1G09420.1 )
(BLAST)

001: MSLSSCLLPF SQSATAPSSS VCSCHLAASF SNFPVSSRDY SFSRSGSLVL NGGGSNLCRR FCGLKLWILK SLNRRQGNNR KHQPVNELTT HSKHTFLSDD
101: ERGFAEETRA EDLRPEENIL GTDLNDGFHN VGDLPPVSKQ LSDDLSDVRR RASLCIAVVG ATGELARGKI FPALFALYYS GYLPEDVAIF GVSRKNLTDE
201: DLRSIIASTL TCRVDHQENC GGKMDAFQSR TYYINGGYNN RDGMSRLAER MKQIEGESEA NRIFYLSVPQ EALVDVACTI GDNAQAPRGW TRIIVEKPFG
301: FNSHSSHQLT KSLLSKFEEK QIYRIDHMLG RNLIENLTVL RFSNLVFEPL WNRTYIRNIQ VIISESIAQT EKFSDGYGII RDIVHSHILQ TIALLAMEPP
401: ISLDGEDIRN EKVKVLRSIR KIDPRDVILG QYKSSSRDKN GVILNGVDPT YCAAALYIDN ARWDGVPFLV RVGTGLIKHR VEIHVQFRHV PGNLYRENIG
501: INIDLGTNEL ILRDEPDEAI LVKINNKVPG LGLQLDASEL NLLYKDRYKT EVPDSYEHLI HDVIDGDNHL FMRSDEVAAA WNILSPVLEE IDKHHTAPEL
601: YEFGGRGPVA AYYLWAKHGV PWADD

Arabidopsis Description

G6PD4Glucose-6-phosphate 1-dehydrogenase [Source:UniProtKB/TrEMBL;Acc:F4I0Y8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.