CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 11

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG96694	Soybean	plastid	83.82	84.93
Solyc01g100950.2.1	Tomato	cytosol	24.51	65.5
VIT_14s0060g00640.t01	Wine grape	plastid	66.18	64.08
GSMUA_Achr11P...	Banana	cytosol	58.99	61.6
CDY32178	Canola	plastid	58.33	60.61
AT1G09420.2	Thale cress	plastid	61.11	58.9
CDY31093	Canola	plastid	59.48	58.43
PGSC0003DMT400007105	Potato	plastid	53.76	55.2
Os03t0318500-01	Rice	plastid	56.7	55.17
OQU92694	Sorghum	plastid	56.7	54.65
TraesCS4B01G178700.1	Wheat	plastid	54.74	54.3
TraesCS4D01G180300.2	Wheat	plastid	55.07	54.18
TraesCS4A01G126200.2	Wheat	plastid	54.58	53.7
KRH44236	Soybean	peroxisome	17.97	52.63
Bra030775.1-P	Field mustard	plastid	58.82	52.25
HORVU4Hr1G052350.8	Barley	cytosol, nucleus	55.39	51.99
KRH47181	Soybean	nucleus, plastid	45.26	47.11
Zm00001d015288_P001	Maize	plastid	15.2	46.27
KRH44244	Soybean	nucleus, plastid	44.44	46.26
KRH01562	Soybean	endoplasmic reticulum, nucleus, plastid	42.97	43.76
KRH70548	Soybean	nucleus, plastid	42.97	43.69
Zm00001d047587_P005	Maize	nucleus	56.05	37.53
KRH07037	Soybean	endoplasmic reticulum	28.1	33.2
KRG94401	Soybean	cytosol, endoplasmic reticulum, mitochondrion	28.1	33.2
KRG94338	Soybean	cytosol, nucleus	27.61	32.56

Protein Annotations

KEGG:00030+1.1.1.49	KEGG:00480+1.1.1.49	EntrezGene:100811075	Gene3D:3.30.360.10	Gene3D:3.40.50.720	MapMan:3.9.1.1
EMBL:ACUP02002115	InterPro:G6P_DH	InterPro:G6P_DH_C	InterPro:G6P_DH_NAD-bd	EnsemblPlantsGene:GLYMA_03G229400	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004345	GO:GO:0005488	GO:GO:0005975	GO:GO:0006006
GO:GO:0006098	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016491
GO:GO:0050661	GO:GO:0055114	UniProt:I1JR33	EnsemblPlants:KRH68414	ProteinID:KRH68414	ProteinID:KRH68414.1
HAMAP:MF_00966	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00479	PFAM:PF02781	PRINTS:PR00079	PANTHER:PTHR23429
PANTHER:PTHR23429:SF4	MetaCyc:PWY-7268	SUPFAM:SSF51735	SUPFAM:SSF55347	TIGRFAMs:TIGR00871	UniParc:UPI00023375B9
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:+:43143981..43150327

Molecular Weight (calculated)

68757.4 Da

IEP (calculated)

7.045

GRAVY (calculated)

-0.199

Length

612 amino acids

Sequence
(BLAST)

001: MSVSFSSTSV SFSESSFAFQ RPAPAHLCSN SLTVASNNFH SATGGGRLVL NVGGTCLCRK FRGLKLWLLE RLSFQFQPPK QPKNRNHHFR NNLENEKGSV
101: SDSSSNLRVP DDKVTPVESL SLLQTGLSGT PVDVGRKPSL CIAVIGATGE LAKRKIFPAL FALYYSGFLP ENVGIFGYSR KDITDEDLRS IIASTLTCRV
201: DHQENCDNKL DAFLSKTYYI NGGYDNKYGM SMLNSRMEQI EGGSKTNRIF YLSVPQEALL DVASCLASSA QTQNGWNRII FEKPFGFDAR SSDRLTQYIL
301: SNFQEKQIFR IDHLLGRNLI ENLTVLRFSN LVFEPLWSRT YIDNVQVILS EDLGVHPGRY FSGYGIIRDI VHCHVLQTIA LLAMEPPISL DGEDIRNEKL
401: KVLRLIRKLE PKDVILGQYK ASGGAKVDAC VNGLTPTYFA AALYIDNARW DGVPFLIKTG LGLIKHQMEI RIQFRNVPGN VYHECIGHNR DRAINELILR
501: DVPDEAILVR VNNKVPGLGL QLDSSELNLL YKDKYNMEVP DSYEHLLLDV IDGDNHLFMR SDELAAAWTI LTPILNEIDK NNMSVELYEM GGRGPIGAYY
601: LWAKHGVRWV ED

Best Arabidopsis Sequence Match ( AT1G09420.1 )
(BLAST)

001: MSLSSCLLPF SQSATAPSSS VCSCHLAASF SNFPVSSRDY SFSRSGSLVL NGGGSNLCRR FCGLKLWILK SLNRRQGNNR KHQPVNELTT HSKHTFLSDD
101: ERGFAEETRA EDLRPEENIL GTDLNDGFHN VGDLPPVSKQ LSDDLSDVRR RASLCIAVVG ATGELARGKI FPALFALYYS GYLPEDVAIF GVSRKNLTDE
201: DLRSIIASTL TCRVDHQENC GGKMDAFQSR TYYINGGYNN RDGMSRLAER MKQIEGESEA NRIFYLSVPQ EALVDVACTI GDNAQAPRGW TRIIVEKPFG
301: FNSHSSHQLT KSLLSKFEEK QIYRIDHMLG RNLIENLTVL RFSNLVFEPL WNRTYIRNIQ VIISESIAQT EKFSDGYGII RDIVHSHILQ TIALLAMEPP
401: ISLDGEDIRN EKVKVLRSIR KIDPRDVILG QYKSSSRDKN GVILNGVDPT YCAAALYIDN ARWDGVPFLV RVGTGLIKHR VEIHVQFRHV PGNLYRENIG
501: INIDLGTNEL ILRDEPDEAI LVKINNKVPG LGLQLDASEL NLLYKDRYKT EVPDSYEHLI HDVIDGDNHL FMRSDEVAAA WNILSPVLEE IDKHHTAPEL
601: YEFGGRGPVA AYYLWAKHGV PWADD

Arabidopsis Description

G6PD4Glucose-6-phosphate 1-dehydrogenase [Source:UniProtKB/TrEMBL;Acc:F4I0Y8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.